Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 MIR1283-1-201ENST00000408494 87 ntBASIC2.92□□□□□ -1.94
KDM1AO60341 AC003685.2-201ENST00000422795 395 ntBASIC2.92□□□□□ -1.94
KDM1AO60341 MTND1P19-201ENST00000511780 315 ntBASIC2.92□□□□□ -1.94
KDM1AO60341 RNU6-1023P-201ENST00000516137 106 ntBASIC2.92□□□□□ -1.94
KDM1AO60341 RPPH1-2P-201ENST00000516688 293 ntBASIC2.92□□□□□ -1.94
KDM1AO60341 MIR3128-201ENST00000581957 66 ntBASIC2.92□□□□□ -1.94
KDM1AO60341 AC037487.3-201ENST00000606668 112 ntBASIC2.92□□□□□ -1.94
KDM1AO60341 AC093732.2-201ENST00000607950 274 ntBASIC2.92□□□□□ -1.94
KDM1AO60341 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.92□□□□□ -1.94
KDM1AO60341 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.92□□□□□ -1.94
KDM1AO60341 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
KDM1AO60341 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
KDM1AO60341 Y_RNA.446-201ENST00000384178 104 ntBASIC2.91□□□□□ -1.94
KDM1AO60341 Y_RNA.477-201ENST00000384352 108 ntBASIC2.91□□□□□ -1.94
KDM1AO60341 Y_RNA.478-201ENST00000384358 107 ntBASIC2.91□□□□□ -1.94
KDM1AO60341 SNORA48.5-201ENST00000391143 135 ntBASIC2.91□□□□□ -1.94
KDM1AO60341 RNU2-54P-201ENST00000410299 190 ntBASIC2.91□□□□□ -1.94
KDM1AO60341 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.91□□□□□ -1.94
KDM1AO60341 RPL23AP3-201ENST00000453844 468 ntBASIC2.91□□□□□ -1.94
KDM1AO60341 RPS29P2-201ENST00000479278 136 ntBASIC2.91□□□□□ -1.94
KDM1AO60341 AP004217.1-201ENST00000480579 346 ntBASIC2.91□□□□□ -1.94
KDM1AO60341 SERF1AP1-201ENST00000514575 187 ntBASIC2.91□□□□□ -1.94
KDM1AO60341 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.91□□□□□ -1.94
KDM1AO60341 RN7SKP43-201ENST00000516173 320 ntBASIC2.91□□□□□ -1.94
KDM1AO60341 RNU6-155P-201ENST00000516347 100 ntBASIC2.91□□□□□ -1.94
KDM1AO60341 SNORA74D-201ENST00000516404 141 ntBASIC2.91□□□□□ -1.94
KDM1AO60341 AC022080.3-201ENST00000544433 482 ntBASIC2.91□□□□□ -1.94
KDM1AO60341 MIR4753-201ENST00000585119 83 ntBASIC2.91□□□□□ -1.94
KDM1AO60341 AC008749.1-201ENST00000597650 306 ntBASIC2.91□□□□□ -1.94
KDM1AO60341 AL355297.2-201ENST00000604792 129 ntBASIC2.91□□□□□ -1.94
KDM1AO60341 AC090425.1-201ENST00000610007 140 ntBASIC2.91□□□□□ -1.94
KDM1AO60341 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.91□□□□□ -1.94
KDM1AO60341 AC010297.1-201ENST00000623948 149 ntBASIC2.91□□□□□ -1.94
KDM1AO60341 FO624990.1-201ENST00000636373 85 ntBASIC2.91□□□□□ -1.94
KDM1AO60341 AC096644.4-201ENST00000563417 2912 ntBASIC2.91□□□□□ -1.94
KDM1AO60341 RNU6-545P-201ENST00000362681 104 ntBASIC2.9□□□□□ -1.95
KDM1AO60341 SNORD31B-201ENST00000364977 69 ntBASIC2.9□□□□□ -1.95
KDM1AO60341 RNU6-1318P-201ENST00000365389 103 ntBASIC2.9□□□□□ -1.95
KDM1AO60341 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
KDM1AO60341 Y_RNA.416-201ENST00000384014 113 ntBASIC2.9□□□□□ -1.95
KDM1AO60341 Y_RNA.569-201ENST00000384749 103 ntBASIC2.9□□□□□ -1.95
KDM1AO60341 MIR548B-201ENST00000385247 97 ntBASIC2.9□□□□□ -1.95
KDM1AO60341 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
KDM1AO60341 RNU6-847P-201ENST00000411115 108 ntBASIC2.9□□□□□ -1.95
KDM1AO60341 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.9□□□□□ -1.95
KDM1AO60341 POLR2KP2-201ENST00000438155 177 ntBASIC2.9□□□□□ -1.95
KDM1AO60341 AL445687.1-201ENST00000439946 251 ntBASIC2.9□□□□□ -1.95
KDM1AO60341 AC074290.1-201ENST00000448883 135 ntBASIC2.9□□□□□ -1.95
KDM1AO60341 MTND4LP30-201ENST00000454092 297 ntBASIC2.9□□□□□ -1.95
KDM1AO60341 AC114982.1-201ENST00000469402 321 ntBASIC2.9□□□□□ -1.95
KDM1AO60341 RN7SL20P-201ENST00000488827 297 ntBASIC2.9□□□□□ -1.95
KDM1AO60341 SRIP1-201ENST00000489235 288 ntBASIC2.9□□□□□ -1.95
KDM1AO60341 RNU6-966P-201ENST00000516479 104 ntBASIC2.9□□□□□ -1.95
KDM1AO60341 RNU2-31P-201ENST00000516954 155 ntBASIC2.9□□□□□ -1.95
KDM1AO60341 SCARNA24.2-201ENST00000516968 130 ntBASIC2.9□□□□□ -1.95
KDM1AO60341 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.9□□□□□ -1.95
KDM1AO60341 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.9□□□□□ -1.95
KDM1AO60341 MIR5194-201ENST00000582634 120 ntBASIC2.9□□□□□ -1.95
KDM1AO60341 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.9□□□□□ -1.95
KDM1AO60341 U2.14-201ENST00000615943 113 ntBASIC2.9□□□□□ -1.95
KDM1AO60341 MIR1248-201ENST00000629190 106 ntBASIC2.9□□□□□ -1.95
KDM1AO60341 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.9□□□□□ -1.95
KDM1AO60341 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
KDM1AO60341 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
KDM1AO60341 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
KDM1AO60341 SNORA20.1-201ENST00000364790 130 ntBASIC2.89□□□□□ -1.95
KDM1AO60341 RNA5SP125-201ENST00000364843 120 ntBASIC2.89□□□□□ -1.95
KDM1AO60341 Y_RNA.352-201ENST00000365439 102 ntBASIC2.89□□□□□ -1.95
KDM1AO60341 RNU6-326P-201ENST00000365480 107 ntBASIC2.89□□□□□ -1.95
KDM1AO60341 AL357139.1-201ENST00000407792 426 ntBASIC2.89□□□□□ -1.95
KDM1AO60341 AC009963.1-201ENST00000417265 157 ntBASIC2.89□□□□□ -1.95
KDM1AO60341 RNU2-12P-201ENST00000517216 168 ntBASIC2.89□□□□□ -1.95
KDM1AO60341 AC004486.1-201ENST00000546846 233 ntBASIC2.89□□□□□ -1.95
KDM1AO60341 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.89□□□□□ -1.95
KDM1AO60341 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.89□□□□□ -1.95
KDM1AO60341 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.88□□□□□ -1.95
KDM1AO60341 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.88□□□□□ -1.95
KDM1AO60341 SNORA25.1-201ENST00000362326 128 ntBASIC2.88□□□□□ -1.95
KDM1AO60341 RNU6-454P-201ENST00000364292 107 ntBASIC2.88□□□□□ -1.95
KDM1AO60341 Y_RNA.383-201ENST00000383855 97 ntBASIC2.88□□□□□ -1.95
KDM1AO60341 RNU6-1199P-201ENST00000411249 104 ntBASIC2.88□□□□□ -1.95
KDM1AO60341 AC092427.1-202ENST00000430569 476 ntBASIC2.88□□□□□ -1.95
KDM1AO60341 AC108059.2-201ENST00000434626 151 ntBASIC2.88□□□□□ -1.95
KDM1AO60341 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.88□□□□□ -1.95
KDM1AO60341 MRPS10P1-201ENST00000448483 130 ntBASIC2.88□□□□□ -1.95
KDM1AO60341 AC016925.1-201ENST00000458303 298 ntBASIC2.88□□□□□ -1.95
KDM1AO60341 RPS29P26-201ENST00000477483 171 ntBASIC2.88□□□□□ -1.95
KDM1AO60341 SCGB1D5P-201ENST00000515134 247 ntBASIC2.88□□□□□ -1.95
KDM1AO60341 Y_RNA.673-201ENST00000516306 88 ntBASIC2.88□□□□□ -1.95
KDM1AO60341 RNU6-388P-201ENST00000517012 105 ntBASIC2.88□□□□□ -1.95
KDM1AO60341 RNU6-389P-201ENST00000517048 105 ntBASIC2.88□□□□□ -1.95
KDM1AO60341 RNA5SP490-201ENST00000517141 136 ntBASIC2.88□□□□□ -1.95
KDM1AO60341 AC005357.1-201ENST00000588399 301 ntBASIC2.88□□□□□ -1.95
KDM1AO60341 AC006380.1-201ENST00000603598 186 ntBASIC2.88□□□□□ -1.95
KDM1AO60341 AL449363.1-201ENST00000617815 186 ntBASIC2.88□□□□□ -1.95
KDM1AO60341 AC092593.1-201ENST00000515413 1815 ntBASIC2.88□□□□□ -1.95
KDM1AO60341 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.88□□□□□ -1.95
KDM1AO60341 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
KDM1AO60341 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.88□□□□□ -1.95
KDM1AO60341 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms