Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.56□□□□□ -2.16
LCMT2O60294 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.56□□□□□ -2.16
LCMT2O60294 UBL5P4-201ENST00000562584 236 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.56□□□□□ -2.16
LCMT2O60294 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.56□□□□□ -2.16
LCMT2O60294 SNRPGP20-201ENST00000604477 205 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 AC016925.2-201ENST00000605108 242 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 ZNF299P-201ENST00000406845 1804 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 AC006026.1-201ENST00000444025 1803 ntBASIC1.56□□□□□ -2.16
LCMT2O60294 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.55□□□□□ -2.16
LCMT2O60294 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LCMT2O60294 RNU4-42P-201ENST00000364738 142 ntBASIC1.55□□□□□ -2.16
LCMT2O60294 RNA5SP363-201ENST00000365072 115 ntBASIC1.55□□□□□ -2.16
LCMT2O60294 Y_RNA.319-201ENST00000365138 92 ntBASIC1.55□□□□□ -2.16
LCMT2O60294 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.55□□□□□ -2.16
LCMT2O60294 RNU6-439P-201ENST00000384188 106 ntBASIC1.55□□□□□ -2.16
LCMT2O60294 RNU6-997P-201ENST00000384725 107 ntBASIC1.55□□□□□ -2.16
LCMT2O60294 MIR153-2-201ENST00000385225 87 ntBASIC1.55□□□□□ -2.16
LCMT2O60294 RNA5SP213-201ENST00000391031 106 ntBASIC1.55□□□□□ -2.16
LCMT2O60294 RNA5SP504-201ENST00000410676 117 ntBASIC1.55□□□□□ -2.16
LCMT2O60294 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LCMT2O60294 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.55□□□□□ -2.16
LCMT2O60294 AC107399.1-201ENST00000451226 265 ntBASIC1.55□□□□□ -2.16
LCMT2O60294 AC007395.1-201ENST00000451333 677 ntBASIC1.55□□□□□ -2.16
LCMT2O60294 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC1.55□□□□□ -2.16
LCMT2O60294 SNORD13-201ENST00000459299 104 ntBASIC1.55□□□□□ -2.16
LCMT2O60294 Y_RNA.638-201ENST00000459374 113 ntBASIC1.55□□□□□ -2.16
LCMT2O60294 HMGN2P9-201ENST00000476875 229 ntBASIC1.55□□□□□ -2.16
LCMT2O60294 AC010409.1-201ENST00000487382 476 ntBASIC1.55□□□□□ -2.16
LCMT2O60294 AC097473.1-201ENST00000508142 408 ntBASIC1.55□□□□□ -2.16
LCMT2O60294 RNA5SP384-201ENST00000516615 116 ntBASIC1.55□□□□□ -2.16
LCMT2O60294 AC005786.1-201ENST00000588553 154 ntBASIC1.55□□□□□ -2.16
LCMT2O60294 AC005014.2-201ENST00000607795 599 ntBASIC1.55□□□□□ -2.16
LCMT2O60294 AC022306.2-201ENST00000617563 647 ntBASIC1.55□□□□□ -2.16
LCMT2O60294 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.55□□□□□ -2.16
LCMT2O60294 RNU1-17P-201ENST00000363022 152 ntBASIC1.54□□□□□ -2.16
LCMT2O60294 Y_RNA.132-201ENST00000363421 102 ntBASIC1.54□□□□□ -2.16
LCMT2O60294 RNU6-873P-201ENST00000363833 107 ntBASIC1.54□□□□□ -2.16
LCMT2O60294 RNU6-1305P-201ENST00000364353 104 ntBASIC1.54□□□□□ -2.16
LCMT2O60294 SNORD81.2-201ENST00000365153 76 ntBASIC1.54□□□□□ -2.16
LCMT2O60294 Y_RNA.404-201ENST00000383978 102 ntBASIC1.54□□□□□ -2.16
LCMT2O60294 RNU6-601P-201ENST00000384540 107 ntBASIC1.54□□□□□ -2.16
LCMT2O60294 MIR300-201ENST00000401138 83 ntBASIC1.54□□□□□ -2.16
LCMT2O60294 RN7SKP101-201ENST00000411376 320 ntBASIC1.54□□□□□ -2.16
LCMT2O60294 RPL37P10-201ENST00000412884 288 ntBASIC1.54□□□□□ -2.16
LCMT2O60294 AC138393.2-201ENST00000414742 246 ntBASIC1.54□□□□□ -2.16
LCMT2O60294 AC060773.1-201ENST00000421698 310 ntBASIC1.54□□□□□ -2.16
LCMT2O60294 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.54□□□□□ -2.16
LCMT2O60294 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.54□□□□□ -2.16
LCMT2O60294 MTND3P10-201ENST00000450967 341 ntBASIC1.54□□□□□ -2.16
LCMT2O60294 RPL7P42-201ENST00000481005 679 ntBASIC1.54□□□□□ -2.16
LCMT2O60294 AC027575.1-201ENST00000481064 460 ntBASIC1.54□□□□□ -2.16
LCMT2O60294 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.54□□□□□ -2.16
LCMT2O60294 SNORA31.17-201ENST00000516953 127 ntBASIC1.54□□□□□ -2.16
LCMT2O60294 AL590705.4-201ENST00000532209 134 ntBASIC1.54□□□□□ -2.16
LCMT2O60294 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.54□□□□□ -2.16
LCMT2O60294 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.54□□□□□ -2.16
LCMT2O60294 AC009229.3-201ENST00000608056 282 ntBASIC1.54□□□□□ -2.16
LCMT2O60294 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.54□□□□□ -2.16
LCMT2O60294 AL159152.1-201ENST00000635019 2587 ntBASIC1.54□□□□□ -2.16
LCMT2O60294 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.16
LCMT2O60294 Y_RNA.2-201ENST00000362330 96 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 RNU6-661P-201ENST00000362409 107 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 Y_RNA.140-201ENST00000363474 103 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 Y_RNA.166-201ENST00000363730 102 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 RNU6-331P-201ENST00000384724 107 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
LCMT2O60294 RNU6-159P-201ENST00000391080 106 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 AC099677.2-201ENST00000436385 175 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.53□□□□□ -2.16
LCMT2O60294 AL357134.1-201ENST00000445848 426 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.53□□□□□ -2.16
LCMT2O60294 RPL31P58-201ENST00000469001 379 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 AP000870.1-201ENST00000472927 406 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 MTND4P12-201ENST00000498999 1377 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 HMGN1P12-201ENST00000499125 195 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.53□□□□□ -2.16
LCMT2O60294 AC067942.3-201ENST00000512025 362 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 RNU7-175P-201ENST00000515915 61 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 Y_RNA.691-201ENST00000516611 103 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 SNORA20.3-201ENST00000516880 132 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 RNA5SP54-201ENST00000516951 92 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 RNU6-856P-201ENST00000516959 98 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 RNU6-1213P-201ENST00000517075 94 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.53□□□□□ -2.16
LCMT2O60294 SUB1P4-201ENST00000566062 339 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 AC005668.1-201ENST00000571142 476 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 MIR5701-3-201ENST00000578890 82 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.53□□□□□ -2.16
LCMT2O60294 MIR4753-201ENST00000585119 83 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 MIR5701-1-201ENST00000585138 82 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 AL355802.3-201ENST00000607571 545 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
LCMT2O60294 AC083806.3-201ENST00000614016 455 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 MIR5701-2-201ENST00000615634 82 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.53□□□□□ -2.16
LCMT2O60294 AC099654.14-201ENST00000638599 341 ntBASIC1.53□□□□□ -2.16
LCMT2O60294 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.52□□□□□ -2.17
LCMT2O60294 RNU6-222P-201ENST00000362438 107 ntBASIC1.52□□□□□ -2.17
LCMT2O60294 RNU6-593P-201ENST00000364716 112 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms