Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RNU6-552P-201ENST00000362869 119 ntBASIC-0.57□□□□□ -2.5
SSSCA1O60232 SNORA36.1-201ENST00000363424 132 ntBASIC-0.57□□□□□ -2.5
SSSCA1O60232 RNU6-883P-201ENST00000384597 107 ntBASIC-0.57□□□□□ -2.5
SSSCA1O60232 MIR526A1-201ENST00000384897 85 ntBASIC-0.57□□□□□ -2.5
SSSCA1O60232 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.57□□□□□ -2.5
SSSCA1O60232 MIR208B-201ENST00000401172 77 ntBASIC-0.57□□□□□ -2.5
SSSCA1O60232 MIR320C1-201ENST00000408566 88 ntBASIC-0.57□□□□□ -2.5
SSSCA1O60232 AC015818.7-201ENST00000428754 109 ntBASIC-0.57□□□□□ -2.5
SSSCA1O60232 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.57□□□□□ -2.5
SSSCA1O60232 MTND4P32-201ENST00000437189 1237 ntBASIC-0.57□□□□□ -2.5
SSSCA1O60232 AC087499.7-201ENST00000441958 109 ntBASIC-0.57□□□□□ -2.5
SSSCA1O60232 MTCO1P27-201ENST00000448269 226 ntBASIC-0.57□□□□□ -2.5
SSSCA1O60232 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC-0.57□□□□□ -2.5
SSSCA1O60232 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.57□□□□□ -2.5
SSSCA1O60232 AHI1-208ENST00000488690 712 ntTSL 5 BASIC-0.57□□□□□ -2.5
SSSCA1O60232 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC-0.57□□□□□ -2.5
SSSCA1O60232 RNU7-12P-201ENST00000516030 62 ntBASIC-0.57□□□□□ -2.5
SSSCA1O60232 DEFB131C-201ENST00000528817 165 ntBASIC-0.57□□□□□ -2.5
SSSCA1O60232 AC007751.1-201ENST00000529260 376 ntBASIC-0.57□□□□□ -2.5
SSSCA1O60232 AC009712.1-201ENST00000564938 316 ntBASIC-0.57□□□□□ -2.5
SSSCA1O60232 AL117336.2-201ENST00000602435 335 ntBASIC-0.57□□□□□ -2.5
SSSCA1O60232 AL158032.1-201ENST00000605401 106 ntBASIC-0.57□□□□□ -2.5
SSSCA1O60232 MIR6759-201ENST00000638110 65 ntBASIC-0.57□□□□□ -2.5
SSSCA1O60232 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.58□□□□□ -2.5
SSSCA1O60232 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.58□□□□□ -2.5
SSSCA1O60232 MIR329-1-201ENST00000385028 80 ntBASIC-0.58□□□□□ -2.5
SSSCA1O60232 AL136310.1-201ENST00000404926 654 ntBASIC-0.58□□□□□ -2.5
SSSCA1O60232 RNU6-735P-201ENST00000410612 107 ntBASIC-0.58□□□□□ -2.5
SSSCA1O60232 MTND3P17-201ENST00000416968 344 ntBASIC-0.58□□□□□ -2.5
SSSCA1O60232 AC006366.1-201ENST00000422002 759 ntBASIC-0.58□□□□□ -2.5
SSSCA1O60232 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.58□□□□□ -2.5
SSSCA1O60232 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.58□□□□□ -2.5
SSSCA1O60232 AL360271.2-201ENST00000447710 161 ntBASIC-0.58□□□□□ -2.5
SSSCA1O60232 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.58□□□□□ -2.5
SSSCA1O60232 RNU7-159P-201ENST00000459284 62 ntBASIC-0.58□□□□□ -2.5
SSSCA1O60232 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.58□□□□□ -2.5
SSSCA1O60232 AC016632.1-201ENST00000503994 196 ntBASIC-0.58□□□□□ -2.5
SSSCA1O60232 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.58□□□□□ -2.5
SSSCA1O60232 MIR5697-201ENST00000578045 78 ntBASIC-0.58□□□□□ -2.5
SSSCA1O60232 MIR5589-201ENST00000579442 60 ntBASIC-0.58□□□□□ -2.5
SSSCA1O60232 AL158042.1-201ENST00000605338 460 ntBASIC-0.58□□□□□ -2.5
SSSCA1O60232 AC068792.1-201ENST00000621354 417 ntBASIC-0.58□□□□□ -2.5
SSSCA1O60232 AP002782.1-201ENST00000623107 614 ntBASIC-0.58□□□□□ -2.5
SSSCA1O60232 MIR499B-201ENST00000636498 73 ntBASIC-0.58□□□□□ -2.5
SSSCA1O60232 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.58□□□□□ -2.5
SSSCA1O60232 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.59□□□□□ -2.5
SSSCA1O60232 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.59□□□□□ -2.5
SSSCA1O60232 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.59□□□□□ -2.5
SSSCA1O60232 RNU6-187P-201ENST00000384139 106 ntBASIC-0.59□□□□□ -2.5
SSSCA1O60232 SNORA2B-201ENST00000384583 137 ntBASIC-0.59□□□□□ -2.5
SSSCA1O60232 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.59□□□□□ -2.5
SSSCA1O60232 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.59□□□□□ -2.5
SSSCA1O60232 RN7SKP142-201ENST00000411236 328 ntBASIC-0.59□□□□□ -2.5
SSSCA1O60232 RNU6-1304P-201ENST00000411374 106 ntBASIC-0.59□□□□□ -2.5
SSSCA1O60232 AL031779.1-201ENST00000415663 330 ntBASIC-0.59□□□□□ -2.5
SSSCA1O60232 AC090960.1-201ENST00000421072 306 ntBASIC-0.59□□□□□ -2.5
SSSCA1O60232 MTND4P19-201ENST00000446659 478 ntBASIC-0.59□□□□□ -2.5
SSSCA1O60232 RNU7-56P-201ENST00000458744 62 ntBASIC-0.59□□□□□ -2.5
SSSCA1O60232 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.59□□□□□ -2.5
SSSCA1O60232 MIR3912-201ENST00000577566 105 ntBASIC-0.59□□□□□ -2.5
SSSCA1O60232 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-0.59□□□□□ -2.5
SSSCA1O60232 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.6□□□□□ -2.51
SSSCA1O60232 RNU6-511P-201ENST00000363496 107 ntBASIC-0.6□□□□□ -2.51
SSSCA1O60232 RNY3P13-201ENST00000365542 102 ntBASIC-0.6□□□□□ -2.51
SSSCA1O60232 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.6□□□□□ -2.51
SSSCA1O60232 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.6□□□□□ -2.51
SSSCA1O60232 RNU7-41P-201ENST00000515917 61 ntBASIC-0.6□□□□□ -2.51
SSSCA1O60232 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.6□□□□□ -2.51
SSSCA1O60232 RNA5SP480-201ENST00000516840 109 ntBASIC-0.6□□□□□ -2.51
SSSCA1O60232 RNU7-128P-201ENST00000517247 62 ntBASIC-0.6□□□□□ -2.51
SSSCA1O60232 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.6□□□□□ -2.51
SSSCA1O60232 DEFB130C-202ENST00000530001 230 ntBASIC-0.6□□□□□ -2.51
SSSCA1O60232 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC-0.6□□□□□ -2.51
SSSCA1O60232 AC096720.1-201ENST00000604441 183 ntBASIC-0.6□□□□□ -2.51
SSSCA1O60232 AL356596.1-201ENST00000624230 379 ntBASIC-0.6□□□□□ -2.51
SSSCA1O60232 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.61□□□□□ -2.51
SSSCA1O60232 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.61□□□□□ -2.51
SSSCA1O60232 RNU6-960P-201ENST00000364056 120 ntBASIC-0.61□□□□□ -2.51
SSSCA1O60232 RNU4-84P-201ENST00000364200 139 ntBASIC-0.61□□□□□ -2.51
SSSCA1O60232 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.61□□□□□ -2.51
SSSCA1O60232 SNORD32A-201ENST00000364805 84 ntBASIC-0.61□□□□□ -2.51
SSSCA1O60232 SNORA26-201ENST00000391286 122 ntBASIC-0.61□□□□□ -2.51
SSSCA1O60232 MIR1302-7-201ENST00000408841 72 ntBASIC-0.61□□□□□ -2.51
SSSCA1O60232 AL022718.1-201ENST00000412004 84 ntBASIC-0.61□□□□□ -2.51
SSSCA1O60232 ZNF885P-201ENST00000420174 1098 ntBASIC-0.61□□□□□ -2.51
SSSCA1O60232 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.61□□□□□ -2.51
SSSCA1O60232 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.61□□□□□ -2.51
SSSCA1O60232 AC005042.3-201ENST00000453230 174 ntBASIC-0.61□□□□□ -2.51
SSSCA1O60232 AC114755.3-201ENST00000481111 251 ntBASIC-0.61□□□□□ -2.51
SSSCA1O60232 RNU6-551P-201ENST00000516661 103 ntBASIC-0.61□□□□□ -2.51
SSSCA1O60232 RNU6-567P-201ENST00000516746 107 ntBASIC-0.61□□□□□ -2.51
SSSCA1O60232 RNU2-12P-201ENST00000517216 168 ntBASIC-0.61□□□□□ -2.51
SSSCA1O60232 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC-0.61□□□□□ -2.51
SSSCA1O60232 MIR4436A-201ENST00000585278 85 ntBASIC-0.61□□□□□ -2.51
SSSCA1O60232 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.61□□□□□ -2.51
SSSCA1O60232 uc_338.28-201ENST00000612082 187 ntBASIC-0.61□□□□□ -2.51
SSSCA1O60232 AC005520.5-201ENST00000613926 164 ntBASIC-0.61□□□□□ -2.51
SSSCA1O60232 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC-0.61□□□□□ -2.51
SSSCA1O60232 U3.4-201ENST00000363352 213 ntBASIC-0.62□□□□□ -2.51
SSSCA1O60232 RNU4-9P-201ENST00000364951 139 ntBASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms