Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.97□□□□□ -2.09
SSX4O60224 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.97□□□□□ -2.09
SSX4O60224 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.09
SSX4O60224 MTND5P10-201ENST00000603719 1809 ntBASIC1.96□□□□□ -2.1
SSX4O60224 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SSX4O60224 Y_RNA.179-201ENST00000363844 90 ntBASIC1.96□□□□□ -2.1
SSX4O60224 Y_RNA.187-201ENST00000363918 113 ntBASIC1.96□□□□□ -2.1
SSX4O60224 RNU6-1040P-201ENST00000383974 107 ntBASIC1.96□□□□□ -2.1
SSX4O60224 RNU6-793P-201ENST00000384233 104 ntBASIC1.96□□□□□ -2.1
SSX4O60224 MIR559-201ENST00000385188 96 ntBASIC1.96□□□□□ -2.1
SSX4O60224 RNA5SP465-201ENST00000391195 109 ntBASIC1.96□□□□□ -2.1
SSX4O60224 MIR1289-2-201ENST00000408360 111 ntBASIC1.96□□□□□ -2.1
SSX4O60224 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
SSX4O60224 AF228730.4-201ENST00000421457 183 ntBASIC1.96□□□□□ -2.1
SSX4O60224 AC016717.1-201ENST00000448918 286 ntBASIC1.96□□□□□ -2.1
SSX4O60224 RNU1-131P-201ENST00000458943 161 ntBASIC1.96□□□□□ -2.1
SSX4O60224 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.96□□□□□ -2.1
SSX4O60224 AC105758.1-201ENST00000506038 399 ntBASIC1.96□□□□□ -2.1
SSX4O60224 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.96□□□□□ -2.1
SSX4O60224 AC093023.1-201ENST00000547375 507 ntBASIC1.96□□□□□ -2.1
SSX4O60224 MIR3169-201ENST00000578032 83 ntBASIC1.96□□□□□ -2.1
SSX4O60224 MZT1P2-201ENST00000604387 248 ntBASIC1.96□□□□□ -2.1
SSX4O60224 AC010999.1-201ENST00000611856 324 ntBASIC1.96□□□□□ -2.1
SSX4O60224 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.96□□□□□ -2.1
SSX4O60224 AC008873.1-201ENST00000625051 138 ntBASIC1.96□□□□□ -2.1
SSX4O60224 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.95□□□□□ -2.1
SSX4O60224 SNORD87-201ENST00000364849 89 ntBASIC1.95□□□□□ -2.1
SSX4O60224 Y_RNA.415-201ENST00000384012 112 ntBASIC1.95□□□□□ -2.1
SSX4O60224 MIR625-201ENST00000385047 85 ntBASIC1.95□□□□□ -2.1
SSX4O60224 AC022028.1-201ENST00000412054 408 ntBASIC1.95□□□□□ -2.1
SSX4O60224 MRPS18CP6-201ENST00000423587 223 ntBASIC1.95□□□□□ -2.1
SSX4O60224 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.95□□□□□ -2.1
SSX4O60224 AC114982.1-201ENST00000469402 321 ntBASIC1.95□□□□□ -2.1
SSX4O60224 AC125232.2-201ENST00000592457 143 ntBASIC1.95□□□□□ -2.1
SSX4O60224 AC008749.1-201ENST00000597650 306 ntBASIC1.95□□□□□ -2.1
SSX4O60224 C8orf59P2-201ENST00000603441 271 ntBASIC1.95□□□□□ -2.1
SSX4O60224 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.95□□□□□ -2.1
SSX4O60224 AL078596.1-201ENST00000624856 447 ntBASIC1.95□□□□□ -2.1
SSX4O60224 AC068205.3-201ENST00000636385 468 ntBASIC1.95□□□□□ -2.1
SSX4O60224 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
SSX4O60224 MTND5P6-201ENST00000422338 1798 ntBASIC1.95□□□□□ -2.1
SSX4O60224 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.95□□□□□ -2.1
SSX4O60224 MTND4P1-201ENST00000457501 1466 ntBASIC1.94□□□□□ -2.1
SSX4O60224 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.94□□□□□ -2.1
SSX4O60224 RNU6-490P-201ENST00000362985 107 ntBASIC1.94□□□□□ -2.1
SSX4O60224 Y_RNA.146-201ENST00000363549 102 ntBASIC1.94□□□□□ -2.1
SSX4O60224 RNU6-975P-201ENST00000384296 105 ntBASIC1.94□□□□□ -2.1
SSX4O60224 RNU2-40P-201ENST00000410833 196 ntBASIC1.94□□□□□ -2.1
SSX4O60224 RNU6-1001P-201ENST00000411265 100 ntBASIC1.94□□□□□ -2.1
SSX4O60224 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.94□□□□□ -2.1
SSX4O60224 AC096920.1-201ENST00000423991 241 ntBASIC1.94□□□□□ -2.1
SSX4O60224 AL357134.1-201ENST00000445848 426 ntBASIC1.94□□□□□ -2.1
SSX4O60224 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.94□□□□□ -2.1
SSX4O60224 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.94□□□□□ -2.1
SSX4O60224 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.94□□□□□ -2.1
SSX4O60224 AC067942.3-201ENST00000512025 362 ntBASIC1.94□□□□□ -2.1
SSX4O60224 RNU6-948P-201ENST00000516374 107 ntBASIC1.94□□□□□ -2.1
SSX4O60224 MIR514B-201ENST00000516774 80 ntBASIC1.94□□□□□ -2.1
SSX4O60224 RNU6-699P-201ENST00000517081 110 ntBASIC1.94□□□□□ -2.1
SSX4O60224 AC022868.1-201ENST00000517767 391 ntBASIC1.94□□□□□ -2.1
SSX4O60224 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.94□□□□□ -2.1
SSX4O60224 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.94□□□□□ -2.1
SSX4O60224 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.94□□□□□ -2.1
SSX4O60224 AC078899.2-201ENST00000595282 212 ntBASIC1.94□□□□□ -2.1
SSX4O60224 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.94□□□□□ -2.1
SSX4O60224 AC087588.2-201ENST00000617667 426 ntBASIC1.94□□□□□ -2.1
SSX4O60224 MTND5P35-201ENST00000557537 1720 ntBASIC1.94□□□□□ -2.1
SSX4O60224 AC016717.2-201ENST00000609089 5141 ntBASIC1.93□□□□□ -2.1
SSX4O60224 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SSX4O60224 SNORD114-1-201ENST00000362705 72 ntBASIC1.93□□□□□ -2.1
SSX4O60224 RNU6-879P-201ENST00000364328 108 ntBASIC1.93□□□□□ -2.1
SSX4O60224 Y_RNA.509-201ENST00000384506 99 ntBASIC1.93□□□□□ -2.1
SSX4O60224 SNORA69.1-201ENST00000390904 137 ntBASIC1.93□□□□□ -2.1
SSX4O60224 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.93□□□□□ -2.1
SSX4O60224 AL591806.2-201ENST00000433122 173 ntBASIC1.93□□□□□ -2.1
SSX4O60224 AC018634.1-201ENST00000437554 401 ntBASIC1.93□□□□□ -2.1
SSX4O60224 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.93□□□□□ -2.1
SSX4O60224 UBE2V1P7-201ENST00000446395 340 ntBASIC1.93□□□□□ -2.1
SSX4O60224 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.93□□□□□ -2.1
SSX4O60224 Y_RNA.638-201ENST00000459374 113 ntBASIC1.93□□□□□ -2.1
SSX4O60224 RNU7-57P-201ENST00000459540 60 ntBASIC1.93□□□□□ -2.1
SSX4O60224 Y_RNA.683-201ENST00000516508 93 ntBASIC1.93□□□□□ -2.1
SSX4O60224 RNA5SP364-201ENST00000516938 78 ntBASIC1.93□□□□□ -2.1
SSX4O60224 AK6P2-201ENST00000549020 471 ntBASIC1.93□□□□□ -2.1
SSX4O60224 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.93□□□□□ -2.1
SSX4O60224 AC002984.1-201ENST00000591692 448 ntBASIC1.93□□□□□ -2.1
SSX4O60224 CYP2C61P-201ENST00000604072 290 ntBASIC1.93□□□□□ -2.1
SSX4O60224 AC080078.3-201ENST00000605407 463 ntBASIC1.93□□□□□ -2.1
SSX4O60224 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.93□□□□□ -2.1
SSX4O60224 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.93□□□□□ -2.1
SSX4O60224 AC104985.2-201ENST00000620598 500 ntBASIC1.93□□□□□ -2.1
SSX4O60224 uc_338.20-201ENST00000621563 178 ntBASIC1.93□□□□□ -2.1
SSX4O60224 MIR6766-201ENST00000622641 72 ntBASIC1.93□□□□□ -2.1
SSX4O60224 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.93□□□□□ -2.1
SSX4O60224 AC073544.1-201ENST00000600110 1595 ntBASIC1.93□□□□□ -2.1
SSX4O60224 AL159152.1-201ENST00000635019 2587 ntBASIC1.92□□□□□ -2.1
SSX4O60224 RNA5SP276-201ENST00000362580 94 ntBASIC1.92□□□□□ -2.1
SSX4O60224 RNA5SP361-201ENST00000362686 118 ntBASIC1.92□□□□□ -2.1
SSX4O60224 RNY3P11-201ENST00000364153 102 ntBASIC1.92□□□□□ -2.1
SSX4O60224 Y_RNA.314-201ENST00000365114 102 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms