Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.01□□□□□ -2.41
PDE6DO43924 AF235103.2-201ENST00000525753 346 ntBASIC0.01□□□□□ -2.41
PDE6DO43924 AC036111.3-201ENST00000526389 112 ntBASIC0.01□□□□□ -2.41
PDE6DO43924 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.01□□□□□ -2.41
PDE6DO43924 BNIP3P39-201ENST00000601077 554 ntBASIC0.01□□□□□ -2.41
PDE6DO43924 AC112191.3-201ENST00000604371 277 ntBASIC0.01□□□□□ -2.41
PDE6DO43924 SCARNA4-201ENST00000629045 128 ntBASIC0.01□□□□□ -2.41
PDE6DO43924 SEPT14P19-203ENST00000633205 211 ntBASIC0.01□□□□□ -2.41
PDE6DO43924 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.01□□□□□ -2.41
PDE6DO43924 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0□□□□□ -2.41
PDE6DO43924 RNU6-227P-201ENST00000362865 103 ntBASIC0□□□□□ -2.41
PDE6DO43924 RNU4-45P-201ENST00000365469 141 ntBASIC0□□□□□ -2.41
PDE6DO43924 SNORD111-201ENST00000408139 94 ntBASIC0□□□□□ -2.41
PDE6DO43924 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0□□□□□ -2.41
PDE6DO43924 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0□□□□□ -2.41
PDE6DO43924 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC0□□□□□ -2.41
PDE6DO43924 AC079781.2-201ENST00000446424 169 ntBASIC0□□□□□ -2.41
PDE6DO43924 MTCO2P18-201ENST00000457151 658 ntBASIC0□□□□□ -2.41
PDE6DO43924 RPL39P5-202ENST00000512505 151 ntBASIC0□□□□□ -2.41
PDE6DO43924 SNORD27.1-201ENST00000516319 72 ntBASIC0□□□□□ -2.41
PDE6DO43924 Vault.3-201ENST00000516676 95 ntBASIC0□□□□□ -2.41
PDE6DO43924 RNU6-467P-201ENST00000517027 110 ntBASIC0□□□□□ -2.41
PDE6DO43924 RNU6-430P-201ENST00000517078 107 ntBASIC0□□□□□ -2.41
PDE6DO43924 AC022878.1-201ENST00000530684 149 ntBASIC0□□□□□ -2.41
PDE6DO43924 FRG2DP-202ENST00000566967 323 ntBASIC0□□□□□ -2.41
PDE6DO43924 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0□□□□□ -2.41
PDE6DO43924 AL133173.2-201ENST00000614270 90 ntBASIC0□□□□□ -2.41
PDE6DO43924 AL138726.1-201ENST00000614873 333 ntBASIC0□□□□□ -2.41
PDE6DO43924 AC008133.2-201ENST00000624540 351 ntBASIC0□□□□□ -2.41
PDE6DO43924 MIR6079-201ENST00000635807 62 ntBASIC0□□□□□ -2.41
PDE6DO43924 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
PDE6DO43924 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
PDE6DO43924 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.01□□□□□ -2.41
PDE6DO43924 RNU6-74P-201ENST00000384235 107 ntBASIC-0.01□□□□□ -2.41
PDE6DO43924 USP9YP12-201ENST00000450481 570 ntBASIC-0.01□□□□□ -2.41
PDE6DO43924 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-0.01□□□□□ -2.41
PDE6DO43924 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.01□□□□□ -2.41
PDE6DO43924 RPS29P27-201ENST00000463711 170 ntBASIC-0.01□□□□□ -2.41
PDE6DO43924 AC010469.2-201ENST00000496412 480 ntBASIC-0.01□□□□□ -2.41
PDE6DO43924 FABP5P5-201ENST00000515537 406 ntBASIC-0.01□□□□□ -2.41
PDE6DO43924 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC-0.01□□□□□ -2.41
PDE6DO43924 MIR3941-201ENST00000582572 103 ntBASIC-0.01□□□□□ -2.41
PDE6DO43924 MIR4999-201ENST00000585029 91 ntBASIC-0.01□□□□□ -2.41
PDE6DO43924 LARP7P1-201ENST00000605576 316 ntBASIC-0.01□□□□□ -2.41
PDE6DO43924 RNU6-85P-201ENST00000605989 107 ntBASIC-0.01□□□□□ -2.41
PDE6DO43924 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC-0.01□□□□□ -2.41
PDE6DO43924 AC027807.2-201ENST00000616099 408 ntBASIC-0.01□□□□□ -2.41
PDE6DO43924 uc_338.11-201ENST00000619132 160 ntBASIC-0.01□□□□□ -2.41
PDE6DO43924 AC005592.1-201ENST00000566527 1640 ntBASIC-0.02□□□□□ -2.41
PDE6DO43924 MIRLET7C-201ENST00000362160 84 ntBASIC-0.02□□□□□ -2.41
PDE6DO43924 RNU6-1266P-201ENST00000362794 105 ntBASIC-0.02□□□□□ -2.41
PDE6DO43924 SNORA25.3-201ENST00000363205 127 ntBASIC-0.02□□□□□ -2.41
PDE6DO43924 RNA5SP62-201ENST00000363457 110 ntBASIC-0.02□□□□□ -2.41
PDE6DO43924 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.02□□□□□ -2.41
PDE6DO43924 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.02□□□□□ -2.41
PDE6DO43924 RNU6-1106P-201ENST00000390845 107 ntBASIC-0.02□□□□□ -2.41
PDE6DO43924 CALM2P3-201ENST00000400429 449 ntBASIC-0.02□□□□□ -2.41
PDE6DO43924 MIR1185-2-201ENST00000408687 86 ntBASIC-0.02□□□□□ -2.41
PDE6DO43924 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.02□□□□□ -2.41
PDE6DO43924 SNRPGP12-201ENST00000449481 213 ntBASIC-0.02□□□□□ -2.41
PDE6DO43924 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.02□□□□□ -2.41
PDE6DO43924 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.02□□□□□ -2.41
PDE6DO43924 RNU2-56P-201ENST00000516826 190 ntBASIC-0.02□□□□□ -2.41
PDE6DO43924 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.02□□□□□ -2.41
PDE6DO43924 MIR4438-201ENST00000585271 93 ntBASIC-0.02□□□□□ -2.41
PDE6DO43924 RNU4-5P-201ENST00000607255 135 ntBASIC-0.02□□□□□ -2.41
PDE6DO43924 SNORD11B-201ENST00000607707 90 ntBASIC-0.02□□□□□ -2.41
PDE6DO43924 AL157392.4-201ENST00000609756 345 ntBASIC-0.02□□□□□ -2.41
PDE6DO43924 MIR6513-201ENST00000621188 64 ntBASIC-0.02□□□□□ -2.41
PDE6DO43924 AC006927.3-201ENST00000638789 384 ntBASIC-0.02□□□□□ -2.41
PDE6DO43924 MTND4P4-201ENST00000439033 1366 ntBASIC-0.03□□□□□ -2.41
PDE6DO43924 SNORD44.1-201ENST00000363202 61 ntBASIC-0.03□□□□□ -2.41
PDE6DO43924 RNY1P10-201ENST00000363268 113 ntBASIC-0.03□□□□□ -2.41
PDE6DO43924 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.03□□□□□ -2.41
PDE6DO43924 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-0.03□□□□□ -2.41
PDE6DO43924 GPR143P-201ENST00000434155 205 ntBASIC-0.03□□□□□ -2.41
PDE6DO43924 RPS29P15-201ENST00000458329 171 ntBASIC-0.03□□□□□ -2.41
PDE6DO43924 SCARNA18-201ENST00000459004 134 ntBASIC-0.03□□□□□ -2.41
PDE6DO43924 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.03□□□□□ -2.41
PDE6DO43924 AC091951.3-201ENST00000504093 246 ntBASIC-0.03□□□□□ -2.41
PDE6DO43924 RNA5SP458-201ENST00000516188 119 ntBASIC-0.03□□□□□ -2.41
PDE6DO43924 RNU2-46P-201ENST00000517038 113 ntBASIC-0.03□□□□□ -2.41
PDE6DO43924 RNU6-58P-201ENST00000517143 103 ntBASIC-0.03□□□□□ -2.41
PDE6DO43924 AC087854.1-201ENST00000519706 414 ntBASIC-0.03□□□□□ -2.41
PDE6DO43924 MTND2P32-201ENST00000521584 1038 ntBASIC-0.03□□□□□ -2.41
PDE6DO43924 MIR4703-201ENST00000577728 79 ntBASIC-0.03□□□□□ -2.41
PDE6DO43924 MIR4711-201ENST00000578274 70 ntBASIC-0.03□□□□□ -2.41
PDE6DO43924 AC136443.5-201ENST00000603741 370 ntBASIC-0.03□□□□□ -2.41
PDE6DO43924 RNU6-1097P-201ENST00000363586 107 ntBASIC-0.04□□□□□ -2.42
PDE6DO43924 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.04□□□□□ -2.42
PDE6DO43924 MIR573-201ENST00000384964 99 ntBASIC-0.04□□□□□ -2.42
PDE6DO43924 RNU6-321P-201ENST00000410912 106 ntBASIC-0.04□□□□□ -2.42
PDE6DO43924 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.04□□□□□ -2.42
PDE6DO43924 AL512286.1-201ENST00000439244 400 ntBASIC-0.04□□□□□ -2.42
PDE6DO43924 RN7SKP164-201ENST00000516138 266 ntBASIC-0.04□□□□□ -2.42
PDE6DO43924 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.04□□□□□ -2.42
PDE6DO43924 AP001372.4-201ENST00000524889 472 ntBASIC-0.04□□□□□ -2.42
PDE6DO43924 AP003072.2-201ENST00000527756 676 ntBASIC-0.04□□□□□ -2.42
PDE6DO43924 AC027288.2-201ENST00000553028 243 ntBASIC-0.04□□□□□ -2.42
PDE6DO43924 MIR5000-201ENST00000577717 103 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms