Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
SNAI2O43623 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
SNAI2O43623 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SNAI2O43623 RNU6-545P-201ENST00000362681 104 ntBASIC1.36□□□□□ -2.19
SNAI2O43623 Y_RNA.187-201ENST00000363918 113 ntBASIC1.36□□□□□ -2.19
SNAI2O43623 RNY3P11-201ENST00000364153 102 ntBASIC1.36□□□□□ -2.19
SNAI2O43623 SNORA70.4-201ENST00000365509 134 ntBASIC1.36□□□□□ -2.19
SNAI2O43623 Y_RNA.394-201ENST00000383942 103 ntBASIC1.36□□□□□ -2.19
SNAI2O43623 MIR10B-201ENST00000385011 110 ntBASIC1.36□□□□□ -2.19
SNAI2O43623 RNA5SP213-201ENST00000391031 106 ntBASIC1.36□□□□□ -2.19
SNAI2O43623 RNU6-159P-201ENST00000391080 106 ntBASIC1.36□□□□□ -2.19
SNAI2O43623 RNU2-20P-201ENST00000410425 191 ntBASIC1.36□□□□□ -2.19
SNAI2O43623 RN7SKP51-201ENST00000410781 304 ntBASIC1.36□□□□□ -2.19
SNAI2O43623 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.36□□□□□ -2.19
SNAI2O43623 AC092423.1-201ENST00000430165 186 ntBASIC1.36□□□□□ -2.19
SNAI2O43623 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.36□□□□□ -2.19
SNAI2O43623 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.36□□□□□ -2.19
SNAI2O43623 MTND5P16-201ENST00000460269 1703 ntBASIC1.36□□□□□ -2.19
SNAI2O43623 AC132942.1-201ENST00000486753 483 ntBASIC1.36□□□□□ -2.19
SNAI2O43623 RPS23P5-201ENST00000495419 428 ntBASIC1.36□□□□□ -2.19
SNAI2O43623 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.36□□□□□ -2.19
SNAI2O43623 AC105758.1-201ENST00000506038 399 ntBASIC1.36□□□□□ -2.19
SNAI2O43623 RNU5F-4P-201ENST00000516581 114 ntBASIC1.36□□□□□ -2.19
SNAI2O43623 RNU6-307P-201ENST00000516743 106 ntBASIC1.36□□□□□ -2.19
SNAI2O43623 Y_RNA.706-201ENST00000516933 99 ntBASIC1.36□□□□□ -2.19
SNAI2O43623 RNU6-699P-201ENST00000517081 110 ntBASIC1.36□□□□□ -2.19
SNAI2O43623 RNA5SP490-201ENST00000517141 136 ntBASIC1.36□□□□□ -2.19
SNAI2O43623 AC004584.2-201ENST00000570407 410 ntBASIC1.36□□□□□ -2.19
SNAI2O43623 MIR5006-201ENST00000583027 110 ntBASIC1.36□□□□□ -2.19
SNAI2O43623 7SK.7-201ENST00000603504 247 ntBASIC1.36□□□□□ -2.19
SNAI2O43623 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.36□□□□□ -2.19
SNAI2O43623 AC100812.1-201ENST00000607622 580 ntBASIC1.36□□□□□ -2.19
SNAI2O43623 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC1.36□□□□□ -2.19
SNAI2O43623 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.36□□□□□ -2.19
SNAI2O43623 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.36□□□□□ -2.19
SNAI2O43623 MIR340-201ENST00000362125 95 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 RNU6-797P-201ENST00000363101 109 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 RNU6-873P-201ENST00000363833 107 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 Y_RNA.333-201ENST00000365274 102 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 Y_RNA.358-201ENST00000365491 99 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 RNU6-1040P-201ENST00000383974 107 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 Y_RNA.463-201ENST00000384271 102 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 Y_RNA.557-201ENST00000384680 107 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 RNU6-541P-201ENST00000384709 110 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 RNU6-700P-201ENST00000391043 107 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 RNA5SP425-201ENST00000410336 112 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 RNU6-1156P-201ENST00000410365 100 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 RNU2-2P-201ENST00000410396 191 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 AL135786.1-201ENST00000415892 214 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 MTCYBP10-201ENST00000424905 650 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.35□□□□□ -2.19
SNAI2O43623 AC236972.2-201ENST00000434979 310 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 RNU7-87P-201ENST00000459343 62 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.35□□□□□ -2.19
SNAI2O43623 AC107393.1-201ENST00000512403 346 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 SNORA25.14-201ENST00000516481 132 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.35□□□□□ -2.19
SNAI2O43623 SUB1P3-201ENST00000564581 315 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 MIR1273D-201ENST00000577266 86 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 U2.15-201ENST00000611544 191 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 U2.16-201ENST00000613119 191 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 U2.12-201ENST00000613778 191 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 U2.20-201ENST00000613956 192 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 MIR8074-201ENST00000615081 81 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 TCL6_2.1-201ENST00000615162 119 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 U2.9-201ENST00000615427 191 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 U2.11-201ENST00000616345 191 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 U2.2-201ENST00000616535 191 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 AC087588.2-201ENST00000617667 426 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 U2.3-201ENST00000617785 191 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 U2.19-201ENST00000618602 191 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 RNU2-1-201ENST00000618664 191 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 U2.6-201ENST00000619225 191 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 U2.5-201ENST00000619465 191 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 U2.10-201ENST00000620268 191 ntBASIC1.35□□□□□ -2.19
SNAI2O43623 MTND5P10-201ENST00000603719 1809 ntBASIC1.34□□□□□ -2.19
SNAI2O43623 Y_RNA.146-201ENST00000363549 102 ntBASIC1.34□□□□□ -2.19
SNAI2O43623 RNA5SP387-201ENST00000364226 106 ntBASIC1.34□□□□□ -2.19
SNAI2O43623 SNORD114-6-201ENST00000364393 72 ntBASIC1.34□□□□□ -2.19
SNAI2O43623 SNORD48-201ENST00000364953 64 ntBASIC1.34□□□□□ -2.19
SNAI2O43623 Y_RNA.364-201ENST00000365532 101 ntBASIC1.34□□□□□ -2.19
SNAI2O43623 RNU6-281P-201ENST00000384212 103 ntBASIC1.34□□□□□ -2.19
SNAI2O43623 Y_RNA.535-201ENST00000384612 99 ntBASIC1.34□□□□□ -2.19
SNAI2O43623 SNORA64-201ENST00000384674 134 ntBASIC1.34□□□□□ -2.19
SNAI2O43623 Y_RNA.577-201ENST00000384794 101 ntBASIC1.34□□□□□ -2.19
SNAI2O43623 RNU1-78P-201ENST00000391248 165 ntBASIC1.34□□□□□ -2.19
SNAI2O43623 RNA5SP504-201ENST00000410676 117 ntBASIC1.34□□□□□ -2.19
SNAI2O43623 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.34□□□□□ -2.19
SNAI2O43623 CHEK2P4-201ENST00000450340 246 ntBASIC1.34□□□□□ -2.19
SNAI2O43623 RPS29P23-201ENST00000458635 123 ntBASIC1.34□□□□□ -2.19
SNAI2O43623 RNU1-98P-201ENST00000458992 160 ntBASIC1.34□□□□□ -2.19
SNAI2O43623 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.34□□□□□ -2.19
SNAI2O43623 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.34□□□□□ -2.19
SNAI2O43623 RNA5SP54-201ENST00000516951 92 ntBASIC1.34□□□□□ -2.19
SNAI2O43623 RNU6-264P-201ENST00000517134 104 ntBASIC1.34□□□□□ -2.19
SNAI2O43623 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.34□□□□□ -2.19
SNAI2O43623 MIR4419B-201ENST00000577260 68 ntBASIC1.34□□□□□ -2.19
SNAI2O43623 MIR5695-201ENST00000579717 85 ntBASIC1.34□□□□□ -2.19
SNAI2O43623 MIR3618-201ENST00000580330 88 ntBASIC1.34□□□□□ -2.19
SNAI2O43623 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 186.3 ms