Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 MIR5094-201ENST00000578766 85 ntBASIC1.61□□□□□ -2.15
CUX2O14529 AC009994.1-201ENST00000606889 253 ntBASIC1.61□□□□□ -2.15
CUX2O14529 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.61□□□□□ -2.15
CUX2O14529 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.61□□□□□ -2.15
CUX2O14529 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.61□□□□□ -2.15
CUX2O14529 Y_RNA.123-201ENST00000363338 102 ntBASIC1.6□□□□□ -2.15
CUX2O14529 RNU6-483P-201ENST00000384088 108 ntBASIC1.6□□□□□ -2.15
CUX2O14529 SNORA12.2-201ENST00000391040 156 ntBASIC1.6□□□□□ -2.15
CUX2O14529 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
CUX2O14529 CALM2P3-201ENST00000400429 449 ntBASIC1.6□□□□□ -2.15
CUX2O14529 RNU2-7P-201ENST00000410794 178 ntBASIC1.6□□□□□ -2.15
CUX2O14529 MTND2P22-201ENST00000444325 1033 ntBASIC1.6□□□□□ -2.15
CUX2O14529 MTND1P29-201ENST00000448112 647 ntBASIC1.6□□□□□ -2.15
CUX2O14529 AC112492.4-201ENST00000456549 352 ntBASIC1.6□□□□□ -2.15
CUX2O14529 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.6□□□□□ -2.15
CUX2O14529 RNU6-1208P-201ENST00000459588 107 ntBASIC1.6□□□□□ -2.15
CUX2O14529 RPS29P27-201ENST00000463711 170 ntBASIC1.6□□□□□ -2.15
CUX2O14529 Y_RNA.693-201ENST00000516641 110 ntBASIC1.6□□□□□ -2.15
CUX2O14529 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.6□□□□□ -2.15
CUX2O14529 AL162413.1-201ENST00000603198 110 ntBASIC1.6□□□□□ -2.15
CUX2O14529 RNU6-562P-201ENST00000362731 107 ntBASIC1.59□□□□□ -2.15
CUX2O14529 MIR521-1-201ENST00000384902 87 ntBASIC1.59□□□□□ -2.15
CUX2O14529 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
CUX2O14529 RNU6-1068P-201ENST00000410958 103 ntBASIC1.59□□□□□ -2.15
CUX2O14529 AC083904.1-201ENST00000487828 231 ntBASIC1.59□□□□□ -2.15
CUX2O14529 SUMO2P18-201ENST00000518873 252 ntBASIC1.59□□□□□ -2.15
CUX2O14529 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.59□□□□□ -2.15
CUX2O14529 MRPS36P4-201ENST00000534436 298 ntBASIC1.59□□□□□ -2.15
CUX2O14529 AC024909.2-201ENST00000553035 286 ntBASIC1.59□□□□□ -2.15
CUX2O14529 SCOCP1-201ENST00000554676 349 ntBASIC1.59□□□□□ -2.15
CUX2O14529 AC245505.1-201ENST00000556398 224 ntBASIC1.59□□□□□ -2.15
CUX2O14529 MIR4698-201ENST00000577795 80 ntBASIC1.59□□□□□ -2.15
CUX2O14529 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.59□□□□□ -2.15
CUX2O14529 AP000907.4-201ENST00000604143 237 ntBASIC1.59□□□□□ -2.15
CUX2O14529 RNU6-89P-201ENST00000606519 100 ntBASIC1.59□□□□□ -2.15
CUX2O14529 DISC2.1-201ENST00000612827 205 ntBASIC1.59□□□□□ -2.15
CUX2O14529 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC1.59□□□□□ -2.15
CUX2O14529 MIR338-201ENST00000636369 67 ntBASIC1.59□□□□□ -2.15
CUX2O14529 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
CUX2O14529 RNU6-418P-201ENST00000384035 107 ntBASIC1.58□□□□□ -2.16
CUX2O14529 MIR30A-201ENST00000385092 71 ntBASIC1.58□□□□□ -2.16
CUX2O14529 MIR300-201ENST00000401138 83 ntBASIC1.58□□□□□ -2.16
CUX2O14529 ERLEC1P1-201ENST00000433806 578 ntBASIC1.58□□□□□ -2.16
CUX2O14529 AL353572.1-201ENST00000442490 417 ntBASIC1.58□□□□□ -2.16
CUX2O14529 MTND1P1-201ENST00000445453 368 ntBASIC1.58□□□□□ -2.16
CUX2O14529 AC008834.1-201ENST00000511612 175 ntBASIC1.58□□□□□ -2.16
CUX2O14529 RNU6-314P-201ENST00000516574 104 ntBASIC1.58□□□□□ -2.16
CUX2O14529 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.58□□□□□ -2.16
CUX2O14529 AL160236.1-201ENST00000556317 195 ntBASIC1.58□□□□□ -2.16
CUX2O14529 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.58□□□□□ -2.16
CUX2O14529 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.58□□□□□ -2.16
CUX2O14529 AC100830.2-201ENST00000581636 240 ntBASIC1.58□□□□□ -2.16
CUX2O14529 AC103591.3-201ENST00000608684 209 ntBASIC1.58□□□□□ -2.16
CUX2O14529 MIR8074-201ENST00000615081 81 ntBASIC1.58□□□□□ -2.16
CUX2O14529 AC137590.2-201ENST00000619709 240 ntBASIC1.58□□□□□ -2.16
CUX2O14529 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CUX2O14529 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
CUX2O14529 Y_RNA.194-201ENST00000363985 102 ntBASIC1.57□□□□□ -2.16
CUX2O14529 RPL21P111-201ENST00000418453 477 ntBASIC1.57□□□□□ -2.16
CUX2O14529 CST2P1-201ENST00000425770 87 ntBASIC1.57□□□□□ -2.16
CUX2O14529 SEPT14P3-201ENST00000439401 183 ntBASIC1.57□□□□□ -2.16
CUX2O14529 AL732372.2-207ENST00000445840 183 ntBASIC1.57□□□□□ -2.16
CUX2O14529 SEPT14P2-201ENST00000453405 183 ntBASIC1.57□□□□□ -2.16
CUX2O14529 SEPT14P4-201ENST00000513445 186 ntBASIC1.57□□□□□ -2.16
CUX2O14529 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.57□□□□□ -2.16
CUX2O14529 RNU6-948P-201ENST00000516374 107 ntBASIC1.57□□□□□ -2.16
CUX2O14529 RNU6-835P-201ENST00000516974 104 ntBASIC1.57□□□□□ -2.16
CUX2O14529 FO082796.1-201ENST00000523795 183 ntBASIC1.57□□□□□ -2.16
CUX2O14529 HMGB1P33-201ENST00000563485 527 ntBASIC1.57□□□□□ -2.16
CUX2O14529 MIR5006-201ENST00000583027 110 ntBASIC1.57□□□□□ -2.16
CUX2O14529 SNRPGP20-201ENST00000604477 205 ntBASIC1.57□□□□□ -2.16
CUX2O14529 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC1.57□□□□□ -2.16
CUX2O14529 AL359880.1-201ENST00000621879 266 ntBASIC1.57□□□□□ -2.16
CUX2O14529 RNU6-877P-201ENST00000383868 107 ntBASIC1.56□□□□□ -2.16
CUX2O14529 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CUX2O14529 MIR934-201ENST00000401241 83 ntBASIC1.56□□□□□ -2.16
CUX2O14529 AL590002.1-201ENST00000406554 418 ntBASIC1.56□□□□□ -2.16
CUX2O14529 MIR320B2-201ENST00000408479 138 ntBASIC1.56□□□□□ -2.16
CUX2O14529 RNU6-648P-201ENST00000410190 107 ntBASIC1.56□□□□□ -2.16
CUX2O14529 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.56□□□□□ -2.16
CUX2O14529 snoU13.6-201ENST00000458785 104 ntBASIC1.56□□□□□ -2.16
CUX2O14529 AC010409.1-201ENST00000487382 476 ntBASIC1.56□□□□□ -2.16
CUX2O14529 AC093534.1-201ENST00000504977 132 ntBASIC1.56□□□□□ -2.16
CUX2O14529 FAM206BP-201ENST00000510179 541 ntBASIC1.56□□□□□ -2.16
CUX2O14529 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.56□□□□□ -2.16
CUX2O14529 RN7SKP179-201ENST00000516126 217 ntBASIC1.56□□□□□ -2.16
CUX2O14529 RNU6-1281P-201ENST00000516223 105 ntBASIC1.56□□□□□ -2.16
CUX2O14529 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.56□□□□□ -2.16
CUX2O14529 CPDP1-201ENST00000579660 283 ntBASIC1.56□□□□□ -2.16
CUX2O14529 MIR4753-201ENST00000585119 83 ntBASIC1.56□□□□□ -2.16
CUX2O14529 MIR8076-201ENST00000611401 83 ntBASIC1.56□□□□□ -2.16
CUX2O14529 FER-210ENST00000628534 558 ntTSL 5 BASIC1.56□□□□□ -2.16
CUX2O14529 RNU6-862P-201ENST00000362804 105 ntBASIC1.56□□□□□ -2.16
CUX2O14529 RNU6-254P-201ENST00000363377 107 ntBASIC1.56□□□□□ -2.16
CUX2O14529 RNU4-20P-201ENST00000365601 151 ntBASIC1.56□□□□□ -2.16
CUX2O14529 Y_RNA.517-201ENST00000384551 106 ntBASIC1.56□□□□□ -2.16
CUX2O14529 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CUX2O14529 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
CUX2O14529 RNU6-360P-201ENST00000390944 104 ntBASIC1.56□□□□□ -2.16
CUX2O14529 RNU6-325P-201ENST00000411132 105 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 139 ms