Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.68□□□□□ -1.98
FOXN3O00409 AC062016.1-201ENST00000355719 319 ntBASIC2.68□□□□□ -1.98
FOXN3O00409 RNA5SP456-201ENST00000364002 114 ntBASIC2.68□□□□□ -1.98
FOXN3O00409 Y_RNA.551-201ENST00000384661 102 ntBASIC2.68□□□□□ -1.98
FOXN3O00409 MIR27B-201ENST00000385129 97 ntBASIC2.68□□□□□ -1.98
FOXN3O00409 RNU2-20P-201ENST00000410425 191 ntBASIC2.68□□□□□ -1.98
FOXN3O00409 RNU2-38P-201ENST00000410856 79 ntBASIC2.68□□□□□ -1.98
FOXN3O00409 AC004866.1-201ENST00000411748 78 ntBASIC2.68□□□□□ -1.98
FOXN3O00409 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.68□□□□□ -1.98
FOXN3O00409 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.68□□□□□ -1.98
FOXN3O00409 AC010095.1-201ENST00000443543 144 ntBASIC2.68□□□□□ -1.98
FOXN3O00409 AC098869.1-201ENST00000481627 292 ntBASIC2.68□□□□□ -1.98
FOXN3O00409 Y_RNA.668-201ENST00000516233 93 ntBASIC2.68□□□□□ -1.98
FOXN3O00409 MIR3670-2-201ENST00000582974 65 ntBASIC2.68□□□□□ -1.98
FOXN3O00409 MIR3670-1-201ENST00000584160 65 ntBASIC2.68□□□□□ -1.98
FOXN3O00409 MIR3670-3-201ENST00000584855 65 ntBASIC2.68□□□□□ -1.98
FOXN3O00409 RPL17P51-201ENST00000605218 238 ntBASIC2.68□□□□□ -1.98
FOXN3O00409 MIR3670-4-201ENST00000612260 65 ntBASIC2.68□□□□□ -1.98
FOXN3O00409 AC022202.1-201ENST00000613515 211 ntBASIC2.68□□□□□ -1.98
FOXN3O00409 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
FOXN3O00409 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.68□□□□□ -1.98
FOXN3O00409 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
FOXN3O00409 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.68□□□□□ -1.98
FOXN3O00409 RNU6-545P-201ENST00000362681 104 ntBASIC2.67□□□□□ -1.98
FOXN3O00409 Y_RNA.376-201ENST00000365638 108 ntBASIC2.67□□□□□ -1.98
FOXN3O00409 RNU6-926P-201ENST00000384075 107 ntBASIC2.67□□□□□ -1.98
FOXN3O00409 Y_RNA.477-201ENST00000384352 108 ntBASIC2.67□□□□□ -1.98
FOXN3O00409 AL357139.1-201ENST00000407792 426 ntBASIC2.67□□□□□ -1.98
FOXN3O00409 RNU6-121P-201ENST00000410525 99 ntBASIC2.67□□□□□ -1.98
FOXN3O00409 Y_RNA.618-201ENST00000410949 107 ntBASIC2.67□□□□□ -1.98
FOXN3O00409 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.67□□□□□ -1.98
FOXN3O00409 MTCO3P19-201ENST00000415864 321 ntBASIC2.67□□□□□ -1.98
FOXN3O00409 AC108059.2-201ENST00000434626 151 ntBASIC2.67□□□□□ -1.98
FOXN3O00409 AC073910.1-201ENST00000445047 438 ntBASIC2.67□□□□□ -1.98
FOXN3O00409 HMGN2P18-201ENST00000450680 270 ntBASIC2.67□□□□□ -1.98
FOXN3O00409 AC093852.1-201ENST00000503587 266 ntBASIC2.67□□□□□ -1.98
FOXN3O00409 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.67□□□□□ -1.98
FOXN3O00409 RNA5SP356-201ENST00000515972 94 ntBASIC2.67□□□□□ -1.98
FOXN3O00409 RNA5SP320-201ENST00000516263 124 ntBASIC2.67□□□□□ -1.98
FOXN3O00409 RNU6-388P-201ENST00000517012 105 ntBASIC2.67□□□□□ -1.98
FOXN3O00409 RNU6-389P-201ENST00000517048 105 ntBASIC2.67□□□□□ -1.98
FOXN3O00409 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.67□□□□□ -1.98
FOXN3O00409 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.67□□□□□ -1.98
FOXN3O00409 AC009127.3-201ENST00000570531 403 ntBASIC2.67□□□□□ -1.98
FOXN3O00409 MIR3126-201ENST00000577443 74 ntBASIC2.67□□□□□ -1.98
FOXN3O00409 MIR4513-201ENST00000581077 86 ntBASIC2.67□□□□□ -1.98
FOXN3O00409 MIR3668-201ENST00000582138 75 ntBASIC2.67□□□□□ -1.98
FOXN3O00409 AC062037.2-201ENST00000610137 73 ntBASIC2.67□□□□□ -1.98
FOXN3O00409 AC010999.1-201ENST00000611856 324 ntBASIC2.67□□□□□ -1.98
FOXN3O00409 AC130454.1-201ENST00000622948 401 ntBASIC2.67□□□□□ -1.98
FOXN3O00409 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
FOXN3O00409 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
FOXN3O00409 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.66□□□□□ -1.98
FOXN3O00409 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
FOXN3O00409 RNU1-76P-201ENST00000362903 159 ntBASIC2.66□□□□□ -1.98
FOXN3O00409 RNU5F-3P-201ENST00000363767 117 ntBASIC2.66□□□□□ -1.98
FOXN3O00409 Y_RNA.179-201ENST00000363844 90 ntBASIC2.66□□□□□ -1.98
FOXN3O00409 RNU6-770P-201ENST00000363929 105 ntBASIC2.66□□□□□ -1.98
FOXN3O00409 RNU6-245P-201ENST00000384020 107 ntBASIC2.66□□□□□ -1.98
FOXN3O00409 Y_RNA.526-201ENST00000384572 110 ntBASIC2.66□□□□□ -1.98
FOXN3O00409 RNU6-907P-201ENST00000390924 102 ntBASIC2.66□□□□□ -1.98
FOXN3O00409 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.66□□□□□ -1.98
FOXN3O00409 EIF1P2-201ENST00000428233 350 ntBASIC2.66□□□□□ -1.98
FOXN3O00409 AC096638.1-201ENST00000444678 216 ntBASIC2.66□□□□□ -1.98
FOXN3O00409 IFNA11P-201ENST00000446352 526 ntBASIC2.66□□□□□ -1.98
FOXN3O00409 AL109933.2-201ENST00000452651 260 ntBASIC2.66□□□□□ -1.98
FOXN3O00409 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.66□□□□□ -1.98
FOXN3O00409 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.66□□□□□ -1.98
FOXN3O00409 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.66□□□□□ -1.98
FOXN3O00409 Y_RNA.680-201ENST00000516441 93 ntBASIC2.66□□□□□ -1.98
FOXN3O00409 AC034114.1-201ENST00000520293 285 ntBASIC2.66□□□□□ -1.98
FOXN3O00409 PRELID2P1-201ENST00000552837 301 ntBASIC2.66□□□□□ -1.98
FOXN3O00409 MZT1P2-201ENST00000604387 248 ntBASIC2.66□□□□□ -1.98
FOXN3O00409 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.66□□□□□ -1.98
FOXN3O00409 AC131280.1-202ENST00000624067 4211 ntBASIC2.66□□□□□ -1.98
FOXN3O00409 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
FOXN3O00409 RNU6-1305P-201ENST00000364353 104 ntBASIC2.65□□□□□ -1.99
FOXN3O00409 SNORD87-201ENST00000364849 89 ntBASIC2.65□□□□□ -1.99
FOXN3O00409 DEFA7P-201ENST00000382676 285 ntBASIC2.65□□□□□ -1.99
FOXN3O00409 RNU6-281P-201ENST00000384212 103 ntBASIC2.65□□□□□ -1.99
FOXN3O00409 RNU6-793P-201ENST00000384233 104 ntBASIC2.65□□□□□ -1.99
FOXN3O00409 Y_RNA.476-201ENST00000384347 108 ntBASIC2.65□□□□□ -1.99
FOXN3O00409 MIR1302-6-201ENST00000408466 90 ntBASIC2.65□□□□□ -1.99
FOXN3O00409 RNU2-48P-201ENST00000410694 191 ntBASIC2.65□□□□□ -1.99
FOXN3O00409 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.65□□□□□ -1.99
FOXN3O00409 RPS12P2-201ENST00000439728 269 ntBASIC2.65□□□□□ -1.99
FOXN3O00409 AC009237.7-201ENST00000447357 229 ntBASIC2.65□□□□□ -1.99
FOXN3O00409 PRELID3BP1-201ENST00000457142 540 ntBASIC2.65□□□□□ -1.99
FOXN3O00409 LINC01399-202ENST00000458450 244 ntBASIC2.65□□□□□ -1.99
FOXN3O00409 AC091179.3-201ENST00000474761 144 ntBASIC2.65□□□□□ -1.99
FOXN3O00409 RRN3P3-201ENST00000549207 578 ntBASIC2.65□□□□□ -1.99
FOXN3O00409 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.65□□□□□ -1.99
FOXN3O00409 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.65□□□□□ -1.99
FOXN3O00409 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.65□□□□□ -1.99
FOXN3O00409 MIR6895-201ENST00000613497 78 ntBASIC2.65□□□□□ -1.99
FOXN3O00409 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
FOXN3O00409 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
FOXN3O00409 Y_RNA.27-201ENST00000362540 103 ntBASIC2.64□□□□□ -1.99
FOXN3O00409 RNU6-379P-201ENST00000363813 104 ntBASIC2.64□□□□□ -1.99
FOXN3O00409 Y_RNA.288-201ENST00000364854 92 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms