Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.31□□□□□ -1.88
RFXAPO00287 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
RFXAPO00287 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RFXAPO00287 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
RFXAPO00287 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RFXAPO00287 MIR22-201ENST00000362190 85 ntBASIC3.3□□□□□ -1.88
RFXAPO00287 Y_RNA.251-201ENST00000364551 99 ntBASIC3.3□□□□□ -1.88
RFXAPO00287 RNU6-1310P-201ENST00000384153 107 ntBASIC3.3□□□□□ -1.88
RFXAPO00287 RNU6-1144P-201ENST00000384247 104 ntBASIC3.3□□□□□ -1.88
RFXAPO00287 RNU6-622P-201ENST00000384272 103 ntBASIC3.3□□□□□ -1.88
RFXAPO00287 MIR616-201ENST00000385293 97 ntBASIC3.3□□□□□ -1.88
RFXAPO00287 MIR208B-201ENST00000401172 77 ntBASIC3.3□□□□□ -1.88
RFXAPO00287 RNA5SP504-201ENST00000410676 117 ntBASIC3.3□□□□□ -1.88
RFXAPO00287 RNA5SP229-201ENST00000410809 99 ntBASIC3.3□□□□□ -1.88
RFXAPO00287 AC099548.1-201ENST00000421443 426 ntBASIC3.3□□□□□ -1.88
RFXAPO00287 NDUFB4P6-201ENST00000436819 366 ntBASIC3.3□□□□□ -1.88
RFXAPO00287 RPL37P4-201ENST00000448908 268 ntBASIC3.3□□□□□ -1.88
RFXAPO00287 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.3□□□□□ -1.88
RFXAPO00287 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
RFXAPO00287 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.3□□□□□ -1.88
RFXAPO00287 RNU6-589P-201ENST00000516485 107 ntBASIC3.3□□□□□ -1.88
RFXAPO00287 RNU6-1073P-201ENST00000517182 106 ntBASIC3.3□□□□□ -1.88
RFXAPO00287 CYCSP23-201ENST00000519781 313 ntBASIC3.3□□□□□ -1.88
RFXAPO00287 CKS1BP7-201ENST00000522230 235 ntBASIC3.3□□□□□ -1.88
RFXAPO00287 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC3.3□□□□□ -1.88
RFXAPO00287 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.3□□□□□ -1.88
RFXAPO00287 MTND5P34-201ENST00000568888 325 ntBASIC3.3□□□□□ -1.88
RFXAPO00287 AC009163.5-201ENST00000575421 637 ntBASIC3.3□□□□□ -1.88
RFXAPO00287 AC090897.2-201ENST00000581715 130 ntBASIC3.3□□□□□ -1.88
RFXAPO00287 AC006380.1-201ENST00000603598 186 ntBASIC3.3□□□□□ -1.88
RFXAPO00287 AL670379.2-201ENST00000604983 252 ntBASIC3.3□□□□□ -1.88
RFXAPO00287 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RFXAPO00287 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RFXAPO00287 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RFXAPO00287 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RFXAPO00287 ADAM3A-203ENST00000461344 2157 ntBASIC3.29□□□□□ -1.88
RFXAPO00287 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
RFXAPO00287 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
RFXAPO00287 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.29□□□□□ -1.88
RFXAPO00287 Y_RNA.229-201ENST00000364347 113 ntBASIC3.29□□□□□ -1.88
RFXAPO00287 RNU6-915P-201ENST00000364943 103 ntBASIC3.29□□□□□ -1.88
RFXAPO00287 RNU6-1280P-201ENST00000365211 107 ntBASIC3.29□□□□□ -1.88
RFXAPO00287 SNORA22-201ENST00000383907 134 ntBASIC3.29□□□□□ -1.88
RFXAPO00287 AL512604.1-201ENST00000404812 257 ntBASIC3.29□□□□□ -1.88
RFXAPO00287 HMGN2P21-201ENST00000447764 270 ntBASIC3.29□□□□□ -1.88
RFXAPO00287 HMGB3P8-201ENST00000449709 577 ntBASIC3.29□□□□□ -1.88
RFXAPO00287 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.29□□□□□ -1.88
RFXAPO00287 RPL23AP70-201ENST00000483361 460 ntBASIC3.29□□□□□ -1.88
RFXAPO00287 RNU6-237P-201ENST00000515985 71 ntBASIC3.29□□□□□ -1.88
RFXAPO00287 AP001328.1-201ENST00000528550 176 ntBASIC3.29□□□□□ -1.88
RFXAPO00287 MIR4679-2-201ENST00000578358 77 ntBASIC3.29□□□□□ -1.88
RFXAPO00287 MIR4425-201ENST00000580572 84 ntBASIC3.29□□□□□ -1.88
RFXAPO00287 SNORD98-201ENST00000636377 67 ntBASIC3.29□□□□□ -1.88
RFXAPO00287 MIR622-201ENST00000638396 96 ntBASIC3.29□□□□□ -1.88
RFXAPO00287 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
RFXAPO00287 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RFXAPO00287 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.29□□□□□ -1.88
RFXAPO00287 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RFXAPO00287 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
RFXAPO00287 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
RFXAPO00287 AC009487.2-201ENST00000420969 6821 ntBASIC3.28□□□□□ -1.88
RFXAPO00287 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.28□□□□□ -1.88
RFXAPO00287 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.28□□□□□ -1.88
RFXAPO00287 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
RFXAPO00287 RNU6-270P-201ENST00000364131 105 ntBASIC3.28□□□□□ -1.88
RFXAPO00287 RNU6-755P-201ENST00000364400 103 ntBASIC3.28□□□□□ -1.88
RFXAPO00287 RNU6-1264P-201ENST00000383891 107 ntBASIC3.28□□□□□ -1.88
RFXAPO00287 RNU6-245P-201ENST00000384020 107 ntBASIC3.28□□□□□ -1.88
RFXAPO00287 SNORA40.5-201ENST00000391061 128 ntBASIC3.28□□□□□ -1.88
RFXAPO00287 RNA5SP89-201ENST00000410300 108 ntBASIC3.28□□□□□ -1.88
RFXAPO00287 RNU6-383P-201ENST00000410864 94 ntBASIC3.28□□□□□ -1.88
RFXAPO00287 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.28□□□□□ -1.88
RFXAPO00287 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC3.28□□□□□ -1.88
RFXAPO00287 RNU7-141P-201ENST00000459304 62 ntBASIC3.28□□□□□ -1.88
RFXAPO00287 SNORD108-201ENST00000459332 71 ntBASIC3.28□□□□□ -1.88
RFXAPO00287 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.28□□□□□ -1.88
RFXAPO00287 SCGB1D5P-201ENST00000515134 247 ntBASIC3.28□□□□□ -1.88
RFXAPO00287 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC3.28□□□□□ -1.88
RFXAPO00287 MIR7843-201ENST00000622274 79 ntBASIC3.28□□□□□ -1.88
RFXAPO00287 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.28□□□□□ -1.88
RFXAPO00287 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
RFXAPO00287 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
RFXAPO00287 AL021368.2-201ENST00000606125 5352 ntBASIC3.28□□□□□ -1.89
RFXAPO00287 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.89
RFXAPO00287 RNU1-62P-201ENST00000362599 164 ntBASIC3.27□□□□□ -1.89
RFXAPO00287 RNU6-1082P-201ENST00000364574 107 ntBASIC3.27□□□□□ -1.89
RFXAPO00287 RNU6-376P-201ENST00000384731 106 ntBASIC3.27□□□□□ -1.89
RFXAPO00287 EI24P2-201ENST00000397776 1076 ntBASIC3.27□□□□□ -1.89
RFXAPO00287 AL133475.1-201ENST00000404414 305 ntBASIC3.27□□□□□ -1.89
RFXAPO00287 AL606845.1-201ENST00000404881 255 ntBASIC3.27□□□□□ -1.89
RFXAPO00287 AL355497.1-201ENST00000406262 551 ntBASIC3.27□□□□□ -1.89
RFXAPO00287 RNU6-855P-201ENST00000410395 104 ntBASIC3.27□□□□□ -1.89
RFXAPO00287 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.27□□□□□ -1.89
RFXAPO00287 ARF4P2-201ENST00000430209 526 ntBASIC3.27□□□□□ -1.89
RFXAPO00287 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC3.27□□□□□ -1.89
RFXAPO00287 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.27□□□□□ -1.89
RFXAPO00287 RNU1-41P-201ENST00000516161 162 ntBASIC3.27□□□□□ -1.89
RFXAPO00287 SNORA72.7-201ENST00000516349 94 ntBASIC3.27□□□□□ -1.89
RFXAPO00287 RNU1-48P-201ENST00000516400 162 ntBASIC3.27□□□□□ -1.89
RFXAPO00287 Y_RNA.712-201ENST00000517011 92 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms