Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RNU6-159P-201ENST00000391080 106 ntBASIC1.74□□□□□ -2.13
NPIPA3F8WFD2 SNORA75.4-201ENST00000391278 119 ntBASIC1.74□□□□□ -2.13
NPIPA3F8WFD2 RNU2-20P-201ENST00000410425 191 ntBASIC1.74□□□□□ -2.13
NPIPA3F8WFD2 CYCSP49-201ENST00000420810 319 ntBASIC1.74□□□□□ -2.13
NPIPA3F8WFD2 MTND3P23-201ENST00000431980 347 ntBASIC1.74□□□□□ -2.13
NPIPA3F8WFD2 RPL23AP50-201ENST00000434149 455 ntBASIC1.74□□□□□ -2.13
NPIPA3F8WFD2 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.74□□□□□ -2.13
NPIPA3F8WFD2 ATP5J2P3-201ENST00000451550 258 ntBASIC1.74□□□□□ -2.13
NPIPA3F8WFD2 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.74□□□□□ -2.13
NPIPA3F8WFD2 Y_RNA.691-201ENST00000516611 103 ntBASIC1.74□□□□□ -2.13
NPIPA3F8WFD2 RNU6-344P-201ENST00000516635 111 ntBASIC1.74□□□□□ -2.13
NPIPA3F8WFD2 RNU6-1213P-201ENST00000517075 94 ntBASIC1.74□□□□□ -2.13
NPIPA3F8WFD2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.74□□□□□ -2.13
NPIPA3F8WFD2 MIR5094-201ENST00000578766 85 ntBASIC1.74□□□□□ -2.13
NPIPA3F8WFD2 AC016727.1-205ENST00000605437 569 ntBASIC1.74□□□□□ -2.13
NPIPA3F8WFD2 AC100812.1-201ENST00000607622 580 ntBASIC1.74□□□□□ -2.13
NPIPA3F8WFD2 AL078596.1-201ENST00000624856 447 ntBASIC1.74□□□□□ -2.13
NPIPA3F8WFD2 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
NPIPA3F8WFD2 MTND4P12-201ENST00000498999 1377 ntBASIC1.73□□□□□ -2.13
NPIPA3F8WFD2 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
NPIPA3F8WFD2 RNU6-222P-201ENST00000362438 107 ntBASIC1.73□□□□□ -2.13
NPIPA3F8WFD2 RNU6-862P-201ENST00000362804 105 ntBASIC1.73□□□□□ -2.13
NPIPA3F8WFD2 RNY1P16-201ENST00000363063 111 ntBASIC1.73□□□□□ -2.13
NPIPA3F8WFD2 RNU6-137P-201ENST00000363680 108 ntBASIC1.73□□□□□ -2.13
NPIPA3F8WFD2 RNU6-280P-201ENST00000364145 104 ntBASIC1.73□□□□□ -2.13
NPIPA3F8WFD2 SNORD87-201ENST00000364849 89 ntBASIC1.73□□□□□ -2.13
NPIPA3F8WFD2 SNORA67.2-201ENST00000384300 149 ntBASIC1.73□□□□□ -2.13
NPIPA3F8WFD2 MIR586-201ENST00000385035 97 ntBASIC1.73□□□□□ -2.13
NPIPA3F8WFD2 AL356432.1-201ENST00000405809 419 ntBASIC1.73□□□□□ -2.13
NPIPA3F8WFD2 RNU6-1304P-201ENST00000411374 106 ntBASIC1.73□□□□□ -2.13
NPIPA3F8WFD2 AC060773.1-201ENST00000421698 310 ntBASIC1.73□□□□□ -2.13
NPIPA3F8WFD2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.73□□□□□ -2.13
NPIPA3F8WFD2 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.73□□□□□ -2.13
NPIPA3F8WFD2 Y_RNA.635-201ENST00000459041 101 ntBASIC1.73□□□□□ -2.13
NPIPA3F8WFD2 RNU7-57P-201ENST00000459540 60 ntBASIC1.73□□□□□ -2.13
NPIPA3F8WFD2 AC116353.2-201ENST00000505332 712 ntBASIC1.73□□□□□ -2.13
NPIPA3F8WFD2 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.73□□□□□ -2.13
NPIPA3F8WFD2 MIR5695-201ENST00000579717 85 ntBASIC1.73□□□□□ -2.13
NPIPA3F8WFD2 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.73□□□□□ -2.13
NPIPA3F8WFD2 SNORD11B-201ENST00000607707 90 ntBASIC1.73□□□□□ -2.13
NPIPA3F8WFD2 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.73□□□□□ -2.13
NPIPA3F8WFD2 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
NPIPA3F8WFD2 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.73□□□□□ -2.13
NPIPA3F8WFD2 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.72□□□□□ -2.13
NPIPA3F8WFD2 RNU1-62P-201ENST00000362599 164 ntBASIC1.72□□□□□ -2.13
NPIPA3F8WFD2 Y_RNA.106-201ENST00000363189 100 ntBASIC1.72□□□□□ -2.13
NPIPA3F8WFD2 RNA5SP138-201ENST00000365098 114 ntBASIC1.72□□□□□ -2.13
NPIPA3F8WFD2 MIR10B-201ENST00000385011 110 ntBASIC1.72□□□□□ -2.13
NPIPA3F8WFD2 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
NPIPA3F8WFD2 RNU6-700P-201ENST00000391043 107 ntBASIC1.72□□□□□ -2.13
NPIPA3F8WFD2 RNU6-57P-201ENST00000411348 103 ntBASIC1.72□□□□□ -2.13
NPIPA3F8WFD2 AC003989.2-201ENST00000440224 169 ntBASIC1.72□□□□□ -2.13
NPIPA3F8WFD2 AC074290.1-201ENST00000448883 135 ntBASIC1.72□□□□□ -2.13
NPIPA3F8WFD2 RNU7-87P-201ENST00000459343 62 ntBASIC1.72□□□□□ -2.13
NPIPA3F8WFD2 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.72□□□□□ -2.13
NPIPA3F8WFD2 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.72□□□□□ -2.13
NPIPA3F8WFD2 SCARNA16.2-201ENST00000516520 172 ntBASIC1.72□□□□□ -2.13
NPIPA3F8WFD2 RNU6-856P-201ENST00000516959 98 ntBASIC1.72□□□□□ -2.13
NPIPA3F8WFD2 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.72□□□□□ -2.13
NPIPA3F8WFD2 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.72□□□□□ -2.13
NPIPA3F8WFD2 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.72□□□□□ -2.13
NPIPA3F8WFD2 AC005730.3-201ENST00000583067 366 ntBASIC1.72□□□□□ -2.13
NPIPA3F8WFD2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.72□□□□□ -2.13
NPIPA3F8WFD2 AL355073.2-201ENST00000612106 557 ntBASIC1.72□□□□□ -2.13
NPIPA3F8WFD2 AC005296.1-201ENST00000616145 209 ntBASIC1.72□□□□□ -2.13
NPIPA3F8WFD2 AC006001.4-201ENST00000622243 395 ntBASIC1.72□□□□□ -2.13
NPIPA3F8WFD2 ZNF355P-201ENST00000427301 3216 ntBASIC1.72□□□□□ -2.13
NPIPA3F8WFD2 Y_RNA.140-201ENST00000363474 103 ntBASIC1.71□□□□□ -2.14
NPIPA3F8WFD2 Y_RNA.179-201ENST00000363844 90 ntBASIC1.71□□□□□ -2.14
NPIPA3F8WFD2 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.71□□□□□ -2.14
NPIPA3F8WFD2 RNU6-1235P-201ENST00000384559 107 ntBASIC1.71□□□□□ -2.14
NPIPA3F8WFD2 RNA5SP504-201ENST00000410676 117 ntBASIC1.71□□□□□ -2.14
NPIPA3F8WFD2 RNA5SP100-201ENST00000410903 110 ntBASIC1.71□□□□□ -2.14
NPIPA3F8WFD2 RNA5SP59-201ENST00000410922 110 ntBASIC1.71□□□□□ -2.14
NPIPA3F8WFD2 RNU6-370P-201ENST00000411008 104 ntBASIC1.71□□□□□ -2.14
NPIPA3F8WFD2 NCOR1P3-201ENST00000420479 303 ntBASIC1.71□□□□□ -2.14
NPIPA3F8WFD2 USP9YP16-201ENST00000430287 407 ntBASIC1.71□□□□□ -2.14
NPIPA3F8WFD2 USP9YP23-201ENST00000455085 407 ntBASIC1.71□□□□□ -2.14
NPIPA3F8WFD2 RNU6-498P-201ENST00000459468 107 ntBASIC1.71□□□□□ -2.14
NPIPA3F8WFD2 AC011406.1-201ENST00000512440 370 ntBASIC1.71□□□□□ -2.14
NPIPA3F8WFD2 RNU2-34P-201ENST00000516534 121 ntBASIC1.71□□□□□ -2.14
NPIPA3F8WFD2 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.71□□□□□ -2.14
NPIPA3F8WFD2 MIR5701-3-201ENST00000578890 82 ntBASIC1.71□□□□□ -2.14
NPIPA3F8WFD2 MIR5701-1-201ENST00000585138 82 ntBASIC1.71□□□□□ -2.14
NPIPA3F8WFD2 RBM11P1-201ENST00000604951 799 ntBASIC1.71□□□□□ -2.14
NPIPA3F8WFD2 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.71□□□□□ -2.14
NPIPA3F8WFD2 MIR5701-2-201ENST00000615634 82 ntBASIC1.71□□□□□ -2.14
NPIPA3F8WFD2 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.71□□□□□ -2.14
NPIPA3F8WFD2 AL669831.3-213ENST00000636676 183 ntBASIC1.71□□□□□ -2.14
NPIPA3F8WFD2 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.71□□□□□ -2.14
NPIPA3F8WFD2 MTND5P16-201ENST00000460269 1703 ntBASIC1.71□□□□□ -2.14
NPIPA3F8WFD2 RNU1-17P-201ENST00000363022 152 ntBASIC1.7□□□□□ -2.14
NPIPA3F8WFD2 Y_RNA.415-201ENST00000384012 112 ntBASIC1.7□□□□□ -2.14
NPIPA3F8WFD2 RNU6-793P-201ENST00000384233 104 ntBASIC1.7□□□□□ -2.14
NPIPA3F8WFD2 RNA5SP213-201ENST00000391031 106 ntBASIC1.7□□□□□ -2.14
NPIPA3F8WFD2 MIR190B-201ENST00000401119 79 ntBASIC1.7□□□□□ -2.14
NPIPA3F8WFD2 AC099677.2-201ENST00000436385 175 ntBASIC1.7□□□□□ -2.14
NPIPA3F8WFD2 AC091179.3-201ENST00000474761 144 ntBASIC1.7□□□□□ -2.14
NPIPA3F8WFD2 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.7□□□□□ -2.14
NPIPA3F8WFD2 RNA5SP458-201ENST00000516188 119 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms