Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
NPIPA2E9PIF3 AC006026.1-201ENST00000444025 1803 ntBASIC1.52□□□□□ -2.17
NPIPA2E9PIF3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.51□□□□□ -2.17
NPIPA2E9PIF3 WWP1P1-201ENST00000466609 2769 ntBASIC1.51□□□□□ -2.17
NPIPA2E9PIF3 Y_RNA.319-201ENST00000365138 92 ntBASIC1.51□□□□□ -2.17
NPIPA2E9PIF3 RNU6-842P-201ENST00000384269 107 ntBASIC1.51□□□□□ -2.17
NPIPA2E9PIF3 RNU6-975P-201ENST00000384296 105 ntBASIC1.51□□□□□ -2.17
NPIPA2E9PIF3 MIR153-2-201ENST00000385225 87 ntBASIC1.51□□□□□ -2.17
NPIPA2E9PIF3 RNU6-510P-201ENST00000391239 108 ntBASIC1.51□□□□□ -2.17
NPIPA2E9PIF3 BTF3P4-201ENST00000418852 495 ntBASIC1.51□□□□□ -2.17
NPIPA2E9PIF3 AL139396.1-201ENST00000421137 167 ntBASIC1.51□□□□□ -2.17
NPIPA2E9PIF3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.51□□□□□ -2.17
NPIPA2E9PIF3 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.51□□□□□ -2.17
NPIPA2E9PIF3 RNU7-57P-201ENST00000459540 60 ntBASIC1.51□□□□□ -2.17
NPIPA2E9PIF3 AC011406.1-201ENST00000512440 370 ntBASIC1.51□□□□□ -2.17
NPIPA2E9PIF3 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.51□□□□□ -2.17
NPIPA2E9PIF3 RNA5SP54-201ENST00000516951 92 ntBASIC1.51□□□□□ -2.17
NPIPA2E9PIF3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.51□□□□□ -2.17
NPIPA2E9PIF3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.51□□□□□ -2.17
NPIPA2E9PIF3 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.51□□□□□ -2.17
NPIPA2E9PIF3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.51□□□□□ -2.17
NPIPA2E9PIF3 UBL5P4-201ENST00000562584 236 ntBASIC1.51□□□□□ -2.17
NPIPA2E9PIF3 7SK.7-201ENST00000603504 247 ntBASIC1.51□□□□□ -2.17
NPIPA2E9PIF3 AC016925.2-201ENST00000605108 242 ntBASIC1.51□□□□□ -2.17
NPIPA2E9PIF3 AC006001.4-201ENST00000622243 395 ntBASIC1.51□□□□□ -2.17
NPIPA2E9PIF3 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.51□□□□□ -2.17
NPIPA2E9PIF3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.51□□□□□ -2.17
NPIPA2E9PIF3 RNU6-727P-201ENST00000363592 107 ntBASIC1.5□□□□□ -2.17
NPIPA2E9PIF3 SNORD115-32-201ENST00000364079 82 ntBASIC1.5□□□□□ -2.17
NPIPA2E9PIF3 RNU1-96P-201ENST00000364163 162 ntBASIC1.5□□□□□ -2.17
NPIPA2E9PIF3 RNU6-338P-201ENST00000383888 105 ntBASIC1.5□□□□□ -2.17
NPIPA2E9PIF3 SNORA67.5-201ENST00000391036 107 ntBASIC1.5□□□□□ -2.17
NPIPA2E9PIF3 RNU4-62P-201ENST00000410125 130 ntBASIC1.5□□□□□ -2.17
NPIPA2E9PIF3 RNU6-174P-201ENST00000410406 106 ntBASIC1.5□□□□□ -2.17
NPIPA2E9PIF3 Y_RNA.619-201ENST00000410951 90 ntBASIC1.5□□□□□ -2.17
NPIPA2E9PIF3 RNU6-57P-201ENST00000411348 103 ntBASIC1.5□□□□□ -2.17
NPIPA2E9PIF3 EBAG9P1-201ENST00000418955 543 ntBASIC1.5□□□□□ -2.17
NPIPA2E9PIF3 AC114982.1-201ENST00000469402 321 ntBASIC1.5□□□□□ -2.17
NPIPA2E9PIF3 MTND5P5-201ENST00000503764 376 ntBASIC1.5□□□□□ -2.17
NPIPA2E9PIF3 AC018710.1-201ENST00000506509 158 ntBASIC1.5□□□□□ -2.17
NPIPA2E9PIF3 MTND4LP26-201ENST00000518144 282 ntBASIC1.5□□□□□ -2.17
NPIPA2E9PIF3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.5□□□□□ -2.17
NPIPA2E9PIF3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.5□□□□□ -2.17
NPIPA2E9PIF3 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.5□□□□□ -2.17
NPIPA2E9PIF3 AC027288.2-201ENST00000553028 243 ntBASIC1.5□□□□□ -2.17
NPIPA2E9PIF3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.5□□□□□ -2.17
NPIPA2E9PIF3 MIR4255-201ENST00000579351 72 ntBASIC1.5□□□□□ -2.17
NPIPA2E9PIF3 MIR4303-201ENST00000581299 66 ntBASIC1.5□□□□□ -2.17
NPIPA2E9PIF3 AC069114.2-201ENST00000604699 304 ntBASIC1.5□□□□□ -2.17
NPIPA2E9PIF3 AL078596.1-201ENST00000624856 447 ntBASIC1.5□□□□□ -2.17
NPIPA2E9PIF3 AC068205.3-201ENST00000636385 468 ntBASIC1.5□□□□□ -2.17
NPIPA2E9PIF3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.5□□□□□ -2.17
NPIPA2E9PIF3 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
NPIPA2E9PIF3 Y_RNA.164-201ENST00000363709 102 ntBASIC1.49□□□□□ -2.17
NPIPA2E9PIF3 RNU6-873P-201ENST00000363833 107 ntBASIC1.49□□□□□ -2.17
NPIPA2E9PIF3 SNORD87-201ENST00000364849 89 ntBASIC1.49□□□□□ -2.17
NPIPA2E9PIF3 Y_RNA.405-201ENST00000383979 100 ntBASIC1.49□□□□□ -2.17
NPIPA2E9PIF3 Y_RNA.451-201ENST00000384200 100 ntBASIC1.49□□□□□ -2.17
NPIPA2E9PIF3 SNORA67.2-201ENST00000384300 149 ntBASIC1.49□□□□□ -2.17
NPIPA2E9PIF3 Y_RNA.524-201ENST00000384564 100 ntBASIC1.49□□□□□ -2.17
NPIPA2E9PIF3 RNU6-296P-201ENST00000384608 107 ntBASIC1.49□□□□□ -2.17
NPIPA2E9PIF3 Y_RNA.561-201ENST00000384694 100 ntBASIC1.49□□□□□ -2.17
NPIPA2E9PIF3 MIR586-201ENST00000385035 97 ntBASIC1.49□□□□□ -2.17
NPIPA2E9PIF3 AL356776.1-201ENST00000406574 447 ntBASIC1.49□□□□□ -2.17
NPIPA2E9PIF3 MIR548F5-201ENST00000408421 86 ntBASIC1.49□□□□□ -2.17
NPIPA2E9PIF3 AC243428.1-201ENST00000421099 264 ntBASIC1.49□□□□□ -2.17
NPIPA2E9PIF3 MTCO3P29-201ENST00000432119 779 ntBASIC1.49□□□□□ -2.17
NPIPA2E9PIF3 HMGN1P13-201ENST00000505795 138 ntBASIC1.49□□□□□ -2.17
NPIPA2E9PIF3 RNU7-175P-201ENST00000515915 61 ntBASIC1.49□□□□□ -2.17
NPIPA2E9PIF3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.49□□□□□ -2.17
NPIPA2E9PIF3 Y_RNA.676-201ENST00000516393 96 ntBASIC1.49□□□□□ -2.17
NPIPA2E9PIF3 RNU2-34P-201ENST00000516534 121 ntBASIC1.49□□□□□ -2.17
NPIPA2E9PIF3 RNU6-358P-201ENST00000516564 75 ntBASIC1.49□□□□□ -2.17
NPIPA2E9PIF3 RNU6-1198P-201ENST00000516904 67 ntBASIC1.49□□□□□ -2.17
NPIPA2E9PIF3 MIR4498-201ENST00000577599 66 ntBASIC1.49□□□□□ -2.17
NPIPA2E9PIF3 AC011712.1-201ENST00000588959 234 ntBASIC1.49□□□□□ -2.17
NPIPA2E9PIF3 RNU6-414P-201ENST00000363705 104 ntBASIC1.48□□□□□ -2.17
NPIPA2E9PIF3 SNORD115-8-201ENST00000363856 82 ntBASIC1.48□□□□□ -2.17
NPIPA2E9PIF3 SNORD115-38-201ENST00000365037 82 ntBASIC1.48□□□□□ -2.17
NPIPA2E9PIF3 RNU6-17P-201ENST00000384245 107 ntBASIC1.48□□□□□ -2.17
NPIPA2E9PIF3 RNU6-18P-201ENST00000384527 107 ntBASIC1.48□□□□□ -2.17
NPIPA2E9PIF3 RNU6-1235P-201ENST00000384559 107 ntBASIC1.48□□□□□ -2.17
NPIPA2E9PIF3 MIR520A-201ENST00000384862 85 ntBASIC1.48□□□□□ -2.17
NPIPA2E9PIF3 AL117342.1-201ENST00000404861 406 ntBASIC1.48□□□□□ -2.17
NPIPA2E9PIF3 RNA5SP504-201ENST00000410676 117 ntBASIC1.48□□□□□ -2.17
NPIPA2E9PIF3 RNU2-7P-201ENST00000410794 178 ntBASIC1.48□□□□□ -2.17
NPIPA2E9PIF3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.48□□□□□ -2.17
NPIPA2E9PIF3 MTND3P8-201ENST00000412909 339 ntBASIC1.48□□□□□ -2.17
NPIPA2E9PIF3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.48□□□□□ -2.17
NPIPA2E9PIF3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.48□□□□□ -2.17
NPIPA2E9PIF3 RNU6-498P-201ENST00000459468 107 ntBASIC1.48□□□□□ -2.17
NPIPA2E9PIF3 RNU6-344P-201ENST00000516635 111 ntBASIC1.48□□□□□ -2.17
NPIPA2E9PIF3 AL590705.4-201ENST00000532209 134 ntBASIC1.48□□□□□ -2.17
NPIPA2E9PIF3 CBX3P8-201ENST00000532412 525 ntBASIC1.48□□□□□ -2.17
NPIPA2E9PIF3 AC084364.2-201ENST00000546924 395 ntBASIC1.48□□□□□ -2.17
NPIPA2E9PIF3 SNORD53B-201ENST00000577887 78 ntBASIC1.48□□□□□ -2.17
NPIPA2E9PIF3 AC060780.3-201ENST00000589464 80 ntBASIC1.48□□□□□ -2.17
NPIPA2E9PIF3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.48□□□□□ -2.17
NPIPA2E9PIF3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
NPIPA2E9PIF3 MTND4P12-201ENST00000498999 1377 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 179.2 ms