Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 U3.40-201ENST00000408706 208 ntBASIC2.57□□□□□ -2
CGB1A6NKQ9 Z98742.2-201ENST00000431564 187 ntBASIC2.57□□□□□ -2
CGB1A6NKQ9 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.57□□□□□ -2
CGB1A6NKQ9 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.57□□□□□ -2
CGB1A6NKQ9 EEF1B2P7-201ENST00000451177 676 ntBASIC2.57□□□□□ -2
CGB1A6NKQ9 RPL36AP48-201ENST00000485521 314 ntBASIC2.57□□□□□ -2
CGB1A6NKQ9 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.57□□□□□ -2
CGB1A6NKQ9 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.57□□□□□ -2
CGB1A6NKQ9 Y_RNA.797-201ENST00000515977 94 ntBASIC2.57□□□□□ -2
CGB1A6NKQ9 RNU6-436P-201ENST00000516171 114 ntBASIC2.57□□□□□ -2
CGB1A6NKQ9 RNU6-107P-201ENST00000516643 102 ntBASIC2.57□□□□□ -2
CGB1A6NKQ9 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.57□□□□□ -2
CGB1A6NKQ9 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.57□□□□□ -2
CGB1A6NKQ9 AC034105.4-201ENST00000568304 277 ntBASIC2.57□□□□□ -2
CGB1A6NKQ9 MIR2682-201ENST00000580305 110 ntBASIC2.57□□□□□ -2
CGB1A6NKQ9 MIR3117-201ENST00000584034 78 ntBASIC2.57□□□□□ -2
CGB1A6NKQ9 RPS15AP11-201ENST00000594193 385 ntBASIC2.57□□□□□ -2
CGB1A6NKQ9 AL356280.1-201ENST00000603614 379 ntBASIC2.57□□□□□ -2
CGB1A6NKQ9 U3.45-201ENST00000607547 219 ntBASIC2.57□□□□□ -2
CGB1A6NKQ9 SNORD11B-201ENST00000607707 90 ntBASIC2.57□□□□□ -2
CGB1A6NKQ9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
CGB1A6NKQ9 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
CGB1A6NKQ9 RNU6-1010P-201ENST00000362757 107 ntBASIC2.56□□□□□ -2
CGB1A6NKQ9 Y_RNA.415-201ENST00000384012 112 ntBASIC2.56□□□□□ -2
CGB1A6NKQ9 MIR23B-201ENST00000384832 97 ntBASIC2.56□□□□□ -2
CGB1A6NKQ9 MIR186-201ENST00000384988 86 ntBASIC2.56□□□□□ -2
CGB1A6NKQ9 RNU6-763P-201ENST00000390865 106 ntBASIC2.56□□□□□ -2
CGB1A6NKQ9 SNORA48.7-201ENST00000391302 135 ntBASIC2.56□□□□□ -2
CGB1A6NKQ9 RNA5SP201-201ENST00000410316 124 ntBASIC2.56□□□□□ -2
CGB1A6NKQ9 AL445687.1-201ENST00000439946 251 ntBASIC2.56□□□□□ -2
CGB1A6NKQ9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.56□□□□□ -2
CGB1A6NKQ9 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.56□□□□□ -2
CGB1A6NKQ9 AC092185.1-201ENST00000491371 97 ntBASIC2.56□□□□□ -2
CGB1A6NKQ9 RNA5SP217-201ENST00000515959 91 ntBASIC2.56□□□□□ -2
CGB1A6NKQ9 RN7SKP164-201ENST00000516138 266 ntBASIC2.56□□□□□ -2
CGB1A6NKQ9 SNORD116-25-201ENST00000516517 92 ntBASIC2.56□□□□□ -2
CGB1A6NKQ9 RNU6-344P-201ENST00000516635 111 ntBASIC2.56□□□□□ -2
CGB1A6NKQ9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.56□□□□□ -2
CGB1A6NKQ9 PCGEM1.1-201ENST00000613431 131 ntBASIC2.56□□□□□ -2
CGB1A6NKQ9 Y_RNA.778-201ENST00000620203 90 ntBASIC2.56□□□□□ -2
CGB1A6NKQ9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CGB1A6NKQ9 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.55□□□□□ -2
CGB1A6NKQ9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
CGB1A6NKQ9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
CGB1A6NKQ9 MIR148B-201ENST00000362252 99 ntBASIC2.55□□□□□ -2
CGB1A6NKQ9 SNORD114-19-201ENST00000363072 75 ntBASIC2.55□□□□□ -2
CGB1A6NKQ9 RNA5SP50-201ENST00000363731 107 ntBASIC2.55□□□□□ -2
CGB1A6NKQ9 RNU6-151P-201ENST00000364158 107 ntBASIC2.55□□□□□ -2
CGB1A6NKQ9 RNU1-33P-201ENST00000364249 162 ntBASIC2.55□□□□□ -2
CGB1A6NKQ9 RNU6-454P-201ENST00000364292 107 ntBASIC2.55□□□□□ -2
CGB1A6NKQ9 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CGB1A6NKQ9 RNU6-1168P-201ENST00000390831 104 ntBASIC2.55□□□□□ -2
CGB1A6NKQ9 RNU6-239P-201ENST00000390990 99 ntBASIC2.55□□□□□ -2
CGB1A6NKQ9 Y_RNA.586-201ENST00000391146 98 ntBASIC2.55□□□□□ -2
CGB1A6NKQ9 RNU6-381P-201ENST00000391259 108 ntBASIC2.55□□□□□ -2
CGB1A6NKQ9 RNU6-710P-201ENST00000410424 105 ntBASIC2.55□□□□□ -2
CGB1A6NKQ9 RNU6-735P-201ENST00000410612 107 ntBASIC2.55□□□□□ -2
CGB1A6NKQ9 EBAG9P1-201ENST00000418955 543 ntBASIC2.55□□□□□ -2
CGB1A6NKQ9 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.55□□□□□ -2
CGB1A6NKQ9 CR769767.1-201ENST00000436337 346 ntBASIC2.55□□□□□ -2
CGB1A6NKQ9 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.55□□□□□ -2
CGB1A6NKQ9 snoU13.14-201ENST00000459372 104 ntBASIC2.55□□□□□ -2
CGB1A6NKQ9 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.55□□□□□ -2
CGB1A6NKQ9 AC068657.1-201ENST00000520807 306 ntBASIC2.55□□□□□ -2
CGB1A6NKQ9 AC069294.1-201ENST00000608397 350 ntBASIC2.55□□□□□ -2
CGB1A6NKQ9 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
CGB1A6NKQ9 AC005562.2-201ENST00000618264 111 ntBASIC2.55□□□□□ -2
CGB1A6NKQ9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
CGB1A6NKQ9 Y_RNA.81-201ENST00000362997 102 ntBASIC2.54□□□□□ -2
CGB1A6NKQ9 RNU6-103P-201ENST00000363686 107 ntBASIC2.54□□□□□ -2
CGB1A6NKQ9 PTMAP2-201ENST00000397627 327 ntBASIC2.54□□□□□ -2
CGB1A6NKQ9 AC004386.2-201ENST00000441858 148 ntBASIC2.54□□□□□ -2
CGB1A6NKQ9 U8.19-201ENST00000459095 133 ntBASIC2.54□□□□□ -2
CGB1A6NKQ9 RPS27P29-201ENST00000463110 252 ntBASIC2.54□□□□□ -2
CGB1A6NKQ9 RN7SL293P-201ENST00000481765 281 ntBASIC2.54□□□□□ -2
CGB1A6NKQ9 RPL21P129-201ENST00000491732 478 ntBASIC2.54□□□□□ -2
CGB1A6NKQ9 AC023141.11-201ENST00000508864 202 ntBASIC2.54□□□□□ -2
CGB1A6NKQ9 AC136628.3-201ENST00000521868 290 ntBASIC2.54□□□□□ -2
CGB1A6NKQ9 EIF4A1P12-201ENST00000551910 141 ntBASIC2.54□□□□□ -2
CGB1A6NKQ9 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.54□□□□□ -2
CGB1A6NKQ9 MIR4431-201ENST00000579990 94 ntBASIC2.54□□□□□ -2
CGB1A6NKQ9 AC090616.3-201ENST00000582184 217 ntBASIC2.54□□□□□ -2
CGB1A6NKQ9 MIR3199-1-201ENST00000582434 88 ntBASIC2.54□□□□□ -2
CGB1A6NKQ9 TCL6_2.1-201ENST00000615162 119 ntBASIC2.54□□□□□ -2
CGB1A6NKQ9 AC013791.1-201ENST00000616619 62 ntBASIC2.54□□□□□ -2
CGB1A6NKQ9 AC068205.3-201ENST00000636385 468 ntBASIC2.54□□□□□ -2
CGB1A6NKQ9 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CGB1A6NKQ9 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CGB1A6NKQ9 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.53□□□□□ -2
CGB1A6NKQ9 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
CGB1A6NKQ9 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.53□□□□□ -2
CGB1A6NKQ9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CGB1A6NKQ9 RNU6-801P-201ENST00000364087 105 ntBASIC2.53□□□□□ -2
CGB1A6NKQ9 SNORD115-30-201ENST00000364117 82 ntBASIC2.53□□□□□ -2
CGB1A6NKQ9 Y_RNA.287-201ENST00000364853 94 ntBASIC2.53□□□□□ -2
CGB1A6NKQ9 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
CGB1A6NKQ9 SNORA22C-201ENST00000384614 134 ntBASIC2.53□□□□□ -2
CGB1A6NKQ9 AL031003.1-201ENST00000404229 172 ntBASIC2.53□□□□□ -2
CGB1A6NKQ9 AL133475.1-201ENST00000404414 305 ntBASIC2.53□□□□□ -2
CGB1A6NKQ9 RPS12P18-201ENST00000442381 270 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms