Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 POLR2KP2-201ENST00000438155 177 ntBASIC-1.58□□□□□ -2.66
LINC01549A6NIU2 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-1.58□□□□□ -2.66
LINC01549A6NIU2 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.58□□□□□ -2.66
LINC01549A6NIU2 RNU6-1069P-201ENST00000516612 133 ntBASIC-1.58□□□□□ -2.66
LINC01549A6NIU2 SNORA43.2-201ENST00000516652 128 ntBASIC-1.58□□□□□ -2.66
LINC01549A6NIU2 SCARNA11.2-201ENST00000517183 154 ntBASIC-1.58□□□□□ -2.66
LINC01549A6NIU2 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-1.58□□□□□ -2.66
LINC01549A6NIU2 ZNF321P-202ENST00000550843 495 ntBASIC-1.58□□□□□ -2.66
LINC01549A6NIU2 MIR4771-2-201ENST00000577758 74 ntBASIC-1.58□□□□□ -2.66
LINC01549A6NIU2 MIR4771-1-201ENST00000582617 74 ntBASIC-1.58□□□□□ -2.66
LINC01549A6NIU2 Z99289.3-201ENST00000605586 594 ntBASIC-1.58□□□□□ -2.66
LINC01549A6NIU2 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-1.58□□□□□ -2.66
LINC01549A6NIU2 AL136221.1-201ENST00000621449 509 ntBASIC-1.58□□□□□ -2.66
LINC01549A6NIU2 U8.5-201ENST00000364528 136 ntBASIC-1.59□□□□□ -2.66
LINC01549A6NIU2 AL133264.1-201ENST00000407157 562 ntBASIC-1.59□□□□□ -2.66
LINC01549A6NIU2 MTND3P20-201ENST00000407663 186 ntBASIC-1.59□□□□□ -2.66
LINC01549A6NIU2 MIR1253-201ENST00000408273 105 ntBASIC-1.59□□□□□ -2.66
LINC01549A6NIU2 MIR1185-2-201ENST00000408687 86 ntBASIC-1.59□□□□□ -2.66
LINC01549A6NIU2 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-1.59□□□□□ -2.66
LINC01549A6NIU2 AC092170.1-201ENST00000440211 356 ntBASIC-1.59□□□□□ -2.66
LINC01549A6NIU2 RPL39P6-201ENST00000448289 150 ntBASIC-1.59□□□□□ -2.66
LINC01549A6NIU2 AC007547.1-201ENST00000462177 490 ntBASIC-1.59□□□□□ -2.66
LINC01549A6NIU2 AL157871.3-201ENST00000557231 293 ntBASIC-1.59□□□□□ -2.66
LINC01549A6NIU2 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-1.59□□□□□ -2.66
LINC01549A6NIU2 MIR4637-201ENST00000582405 84 ntBASIC-1.59□□□□□ -2.66
LINC01549A6NIU2 AC010525.2-201ENST00000590920 195 ntBASIC-1.59□□□□□ -2.66
LINC01549A6NIU2 AC096586.1-201ENST00000610267 561 ntBASIC-1.59□□□□□ -2.66
LINC01549A6NIU2 SNORD38B-202ENST00000625943 69 ntBASIC-1.59□□□□□ -2.66
LINC01549A6NIU2 SCARNA4-201ENST00000629045 128 ntBASIC-1.59□□□□□ -2.66
LINC01549A6NIU2 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.6□□□□□ -2.67
LINC01549A6NIU2 MIR300-201ENST00000401138 83 ntBASIC-1.6□□□□□ -2.67
LINC01549A6NIU2 AL953862.1-201ENST00000423016 168 ntBASIC-1.6□□□□□ -2.67
LINC01549A6NIU2 AC005002.2-201ENST00000438228 269 ntBASIC-1.6□□□□□ -2.67
LINC01549A6NIU2 RPS29P27-201ENST00000463711 170 ntBASIC-1.6□□□□□ -2.67
LINC01549A6NIU2 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC-1.6□□□□□ -2.67
LINC01549A6NIU2 RNU6-948P-201ENST00000516374 107 ntBASIC-1.6□□□□□ -2.67
LINC01549A6NIU2 RNU6-504P-201ENST00000516568 104 ntBASIC-1.6□□□□□ -2.67
LINC01549A6NIU2 AC090572.1-201ENST00000519251 160 ntBASIC-1.6□□□□□ -2.67
LINC01549A6NIU2 AC063944.3-201ENST00000609969 533 ntBASIC-1.6□□□□□ -2.67
LINC01549A6NIU2 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.6□□□□□ -2.67
LINC01549A6NIU2 Y_RNA.33-201ENST00000362591 102 ntBASIC-1.61□□□□□ -2.67
LINC01549A6NIU2 RNA5SP205-201ENST00000364653 136 ntBASIC-1.61□□□□□ -2.67
LINC01549A6NIU2 RNU6-975P-201ENST00000384296 105 ntBASIC-1.61□□□□□ -2.67
LINC01549A6NIU2 MIR802-201ENST00000390235 94 ntBASIC-1.61□□□□□ -2.67
LINC01549A6NIU2 RNA5SP25-201ENST00000410815 110 ntBASIC-1.61□□□□□ -2.67
LINC01549A6NIU2 UBE2V1P11-201ENST00000411559 285 ntBASIC-1.61□□□□□ -2.67
LINC01549A6NIU2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-1.61□□□□□ -2.67
LINC01549A6NIU2 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC-1.61□□□□□ -2.67
LINC01549A6NIU2 USP9YP28-201ENST00000435142 589 ntBASIC-1.61□□□□□ -2.67
LINC01549A6NIU2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-1.61□□□□□ -2.67
LINC01549A6NIU2 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-1.61□□□□□ -2.67
LINC01549A6NIU2 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC-1.61□□□□□ -2.67
LINC01549A6NIU2 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-1.61□□□□□ -2.67
LINC01549A6NIU2 Y_RNA.673-201ENST00000516306 88 ntBASIC-1.61□□□□□ -2.67
LINC01549A6NIU2 RNU1-29P-201ENST00000606574 126 ntBASIC-1.61□□□□□ -2.67
LINC01549A6NIU2 AC006927.4-201ENST00000639187 543 ntBASIC-1.61□□□□□ -2.67
LINC01549A6NIU2 RNU6-545P-201ENST00000362681 104 ntBASIC-1.62□□□□□ -2.67
LINC01549A6NIU2 RNU6-839P-201ENST00000363347 108 ntBASIC-1.62□□□□□ -2.67
LINC01549A6NIU2 RNU6-580P-201ENST00000365159 107 ntBASIC-1.62□□□□□ -2.67
LINC01549A6NIU2 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.62□□□□□ -2.67
LINC01549A6NIU2 MIR520C-201ENST00000385005 87 ntBASIC-1.62□□□□□ -2.67
LINC01549A6NIU2 RNU6-817P-201ENST00000391083 104 ntBASIC-1.62□□□□□ -2.67
LINC01549A6NIU2 AL355143.1-201ENST00000407101 841 ntBASIC-1.62□□□□□ -2.67
LINC01549A6NIU2 Y_RNA.623-201ENST00000411128 95 ntBASIC-1.62□□□□□ -2.67
LINC01549A6NIU2 MTND3P17-201ENST00000416968 344 ntBASIC-1.62□□□□□ -2.67
LINC01549A6NIU2 AC015818.7-201ENST00000428754 109 ntBASIC-1.62□□□□□ -2.67
LINC01549A6NIU2 MTATP6P23-201ENST00000440153 476 ntBASIC-1.62□□□□□ -2.67
LINC01549A6NIU2 AC087499.7-201ENST00000441958 109 ntBASIC-1.62□□□□□ -2.67
LINC01549A6NIU2 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.62□□□□□ -2.67
LINC01549A6NIU2 MIR2115-201ENST00000516657 100 ntBASIC-1.62□□□□□ -2.67
LINC01549A6NIU2 AC026616.1-201ENST00000523157 525 ntBASIC-1.62□□□□□ -2.67
LINC01549A6NIU2 MIR3925-201ENST00000584674 77 ntBASIC-1.62□□□□□ -2.67
LINC01549A6NIU2 AC104073.3-201ENST00000610942 955 ntBASIC-1.62□□□□□ -2.67
LINC01549A6NIU2 RNU6-78P-201ENST00000362897 107 ntBASIC-1.63□□□□□ -2.67
LINC01549A6NIU2 Y_RNA.534-201ENST00000384599 112 ntBASIC-1.63□□□□□ -2.67
LINC01549A6NIU2 MTND4P25-201ENST00000441039 533 ntBASIC-1.63□□□□□ -2.67
LINC01549A6NIU2 ZNF736P5Y-201ENST00000451173 805 ntBASIC-1.63□□□□□ -2.67
LINC01549A6NIU2 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC-1.63□□□□□ -2.67
LINC01549A6NIU2 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.63□□□□□ -2.67
LINC01549A6NIU2 SCARNA17-201ENST00000516183 144 ntBASIC-1.63□□□□□ -2.67
LINC01549A6NIU2 UBE2Q2P8-201ENST00000560644 102 ntBASIC-1.63□□□□□ -2.67
LINC01549A6NIU2 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-1.63□□□□□ -2.67
LINC01549A6NIU2 MIR1273C-201ENST00000578669 77 ntBASIC-1.63□□□□□ -2.67
LINC01549A6NIU2 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-1.63□□□□□ -2.67
LINC01549A6NIU2 AC008608.1-201ENST00000603910 127 ntBASIC-1.63□□□□□ -2.67
LINC01549A6NIU2 AC020891.4-201ENST00000605745 93 ntBASIC-1.63□□□□□ -2.67
LINC01549A6NIU2 AC104458.1-201ENST00000608243 463 ntBASIC-1.63□□□□□ -2.67
LINC01549A6NIU2 RNU6-650P-201ENST00000365658 111 ntBASIC-1.64□□□□□ -2.67
LINC01549A6NIU2 RNU6-395P-201ENST00000365662 106 ntBASIC-1.64□□□□□ -2.67
LINC01549A6NIU2 MIR1283-1-201ENST00000408494 87 ntBASIC-1.64□□□□□ -2.67
LINC01549A6NIU2 RNU2-3P-201ENST00000410144 191 ntBASIC-1.64□□□□□ -2.67
LINC01549A6NIU2 AL512326.2-201ENST00000426359 151 ntBASIC-1.64□□□□□ -2.67
LINC01549A6NIU2 AL627311.1-201ENST00000431514 115 ntBASIC-1.64□□□□□ -2.67
LINC01549A6NIU2 RNU7-94P-201ENST00000459576 63 ntBASIC-1.64□□□□□ -2.67
LINC01549A6NIU2 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC-1.64□□□□□ -2.67
LINC01549A6NIU2 AC006001.4-201ENST00000622243 395 ntBASIC-1.64□□□□□ -2.67
LINC01549A6NIU2 AC092104.1-201ENST00000497346 1441 ntBASIC-1.65□□□□□ -2.67
LINC01549A6NIU2 AC099786.3-201ENST00000565735 1410 ntBASIC-1.65□□□□□ -2.67
LINC01549A6NIU2 MIR101-2-201ENST00000362195 79 ntBASIC-1.65□□□□□ -2.67
LINC01549A6NIU2 RNU6-1141P-201ENST00000364520 107 ntBASIC-1.65□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 205.6 ms