Protein–RNA interactions for Protein: A6NFE2

SMCO2, Single-pass membrane and coiled-coil domain-containing protein 2, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO2A6NFE2 MIR4698-201ENST00000577795 80 ntBASIC1.02□□□□□ -2.25
SMCO2A6NFE2 AC073648.5-201ENST00000603502 305 ntBASIC1.02□□□□□ -2.25
SMCO2A6NFE2 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.02□□□□□ -2.25
SMCO2A6NFE2 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.02□□□□□ -2.25
SMCO2A6NFE2 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.02□□□□□ -2.25
SMCO2A6NFE2 FAM157A-202ENST00000615155 405 ntBASIC1.02□□□□□ -2.25
SMCO2A6NFE2 AC137590.2-201ENST00000619709 240 ntBASIC1.02□□□□□ -2.25
SMCO2A6NFE2 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.02□□□□□ -2.25
SMCO2A6NFE2 snoZ196.1-201ENST00000625269 89 ntBASIC1.02□□□□□ -2.25
SMCO2A6NFE2 RNU6-950P-201ENST00000384651 107 ntBASIC1.01□□□□□ -2.25
SMCO2A6NFE2 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
SMCO2A6NFE2 Y_RNA.582-201ENST00000391023 95 ntBASIC1.01□□□□□ -2.25
SMCO2A6NFE2 RNA5SP467-201ENST00000391274 118 ntBASIC1.01□□□□□ -2.25
SMCO2A6NFE2 AC074290.1-201ENST00000448883 135 ntBASIC1.01□□□□□ -2.25
SMCO2A6NFE2 RNU6-956P-201ENST00000458868 103 ntBASIC1.01□□□□□ -2.25
SMCO2A6NFE2 RNU6-261P-201ENST00000459506 102 ntBASIC1.01□□□□□ -2.25
SMCO2A6NFE2 RPL39P38-201ENST00000467018 153 ntBASIC1.01□□□□□ -2.25
SMCO2A6NFE2 RPS3AP17-201ENST00000472594 777 ntBASIC1.01□□□□□ -2.25
SMCO2A6NFE2 RPL23AP75-201ENST00000491601 451 ntBASIC1.01□□□□□ -2.25
SMCO2A6NFE2 RNU6-1038P-201ENST00000516516 104 ntBASIC1.01□□□□□ -2.25
SMCO2A6NFE2 AL929325.1-201ENST00000603096 117 ntBASIC1.01□□□□□ -2.25
SMCO2A6NFE2 AC022217.4-201ENST00000604389 163 ntBASIC1.01□□□□□ -2.25
SMCO2A6NFE2 AL357078.3-201ENST00000607528 618 ntBASIC1.01□□□□□ -2.25
SMCO2A6NFE2 AL121757.2-201ENST00000611223 313 ntBASIC1.01□□□□□ -2.25
SMCO2A6NFE2 AC068647.2-201ENST00000637380 353 ntBASIC1.01□□□□□ -2.25
SMCO2A6NFE2 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1□□□□□ -2.25
SMCO2A6NFE2 RNU6-1305P-201ENST00000364353 104 ntBASIC1□□□□□ -2.25
SMCO2A6NFE2 Y_RNA.238-201ENST00000364441 102 ntBASIC1□□□□□ -2.25
SMCO2A6NFE2 RNU6-1187P-201ENST00000364771 110 ntBASIC1□□□□□ -2.25
SMCO2A6NFE2 SNORD116-8-201ENST00000384365 95 ntBASIC1□□□□□ -2.25
SMCO2A6NFE2 RNU6-1031P-201ENST00000384773 107 ntBASIC1□□□□□ -2.25
SMCO2A6NFE2 TIMM9P3-201ENST00000428659 274 ntBASIC1□□□□□ -2.25
SMCO2A6NFE2 MTCO2P16-201ENST00000436962 677 ntBASIC1□□□□□ -2.25
SMCO2A6NFE2 PGBD4P5-201ENST00000445958 426 ntBASIC1□□□□□ -2.25
SMCO2A6NFE2 MTCO1P29-201ENST00000496868 288 ntBASIC1□□□□□ -2.25
SMCO2A6NFE2 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1□□□□□ -2.25
SMCO2A6NFE2 RN7SKP298-201ENST00000515950 94 ntBASIC1□□□□□ -2.25
SMCO2A6NFE2 SNORA19.2-201ENST00000516013 114 ntBASIC1□□□□□ -2.25
SMCO2A6NFE2 RNU6-835P-201ENST00000516974 104 ntBASIC1□□□□□ -2.25
SMCO2A6NFE2 RNU7-128P-201ENST00000517247 62 ntBASIC1□□□□□ -2.25
SMCO2A6NFE2 SUMO2P16-201ENST00000519475 264 ntBASIC1□□□□□ -2.25
SMCO2A6NFE2 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1□□□□□ -2.25
SMCO2A6NFE2 AC092807.2-201ENST00000609367 243 ntBASIC1□□□□□ -2.25
SMCO2A6NFE2 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1□□□□□ -2.25
SMCO2A6NFE2 TTK-211ENST00000627129 240 ntTSL 5 BASIC1□□□□□ -2.25
SMCO2A6NFE2 AL391516.1-201ENST00000554380 2449 ntBASIC0.99□□□□□ -2.25
SMCO2A6NFE2 RNU6-245P-201ENST00000384020 107 ntBASIC0.99□□□□□ -2.25
SMCO2A6NFE2 MIR520E-201ENST00000384867 87 ntBASIC0.99□□□□□ -2.25
SMCO2A6NFE2 MIR499A-201ENST00000384903 122 ntBASIC0.99□□□□□ -2.25
SMCO2A6NFE2 SNORA12.1-201ENST00000390873 148 ntBASIC0.99□□□□□ -2.25
SMCO2A6NFE2 EIF4E2P1-201ENST00000393781 255 ntBASIC0.99□□□□□ -2.25
SMCO2A6NFE2 RNU6-648P-201ENST00000410190 107 ntBASIC0.99□□□□□ -2.25
SMCO2A6NFE2 RNU6-57P-201ENST00000411348 103 ntBASIC0.99□□□□□ -2.25
SMCO2A6NFE2 NDUFB4P10-201ENST00000452541 359 ntBASIC0.99□□□□□ -2.25
SMCO2A6NFE2 BET1P1-201ENST00000482276 359 ntBASIC0.99□□□□□ -2.25
SMCO2A6NFE2 RNA5SP401-201ENST00000515920 127 ntBASIC0.99□□□□□ -2.25
SMCO2A6NFE2 MTND1P5-201ENST00000517906 940 ntBASIC0.99□□□□□ -2.25
SMCO2A6NFE2 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.99□□□□□ -2.25
SMCO2A6NFE2 BX284668.6-201ENST00000606899 438 ntBASIC0.99□□□□□ -2.25
SMCO2A6NFE2 AC004492.1-201ENST00000607036 742 ntBASIC0.99□□□□□ -2.25
SMCO2A6NFE2 AL133215.3-201ENST00000609801 448 ntBASIC0.99□□□□□ -2.25
SMCO2A6NFE2 Z69908.1-201ENST00000622603 247 ntBASIC0.99□□□□□ -2.25
SMCO2A6NFE2 SNORD50.1-201ENST00000362987 71 ntBASIC0.98□□□□□ -2.25
SMCO2A6NFE2 Y_RNA.191-201ENST00000363972 113 ntBASIC0.98□□□□□ -2.25
SMCO2A6NFE2 RNU6-522P-201ENST00000364497 107 ntBASIC0.98□□□□□ -2.25
SMCO2A6NFE2 Y_RNA.296-201ENST00000364930 108 ntBASIC0.98□□□□□ -2.25
SMCO2A6NFE2 RNU4-66P-201ENST00000365199 138 ntBASIC0.98□□□□□ -2.25
SMCO2A6NFE2 SNORA25-201ENST00000384384 134 ntBASIC0.98□□□□□ -2.25
SMCO2A6NFE2 Y_RNA.553-201ENST00000384670 102 ntBASIC0.98□□□□□ -2.25
SMCO2A6NFE2 RNA5SP323-201ENST00000391094 133 ntBASIC0.98□□□□□ -2.25
SMCO2A6NFE2 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
SMCO2A6NFE2 MIR1253-201ENST00000408273 105 ntBASIC0.98□□□□□ -2.25
SMCO2A6NFE2 RNU4-55P-201ENST00000410731 137 ntBASIC0.98□□□□□ -2.25
SMCO2A6NFE2 AC008134.1-201ENST00000420943 193 ntBASIC0.98□□□□□ -2.25
SMCO2A6NFE2 AC010154.1-201ENST00000425857 269 ntBASIC0.98□□□□□ -2.25
SMCO2A6NFE2 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.98□□□□□ -2.25
SMCO2A6NFE2 AC079354.2-201ENST00000453523 154 ntBASIC0.98□□□□□ -2.25
SMCO2A6NFE2 SRRM1P2-201ENST00000464531 1192 ntBASIC0.98□□□□□ -2.25
SMCO2A6NFE2 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.98□□□□□ -2.25
SMCO2A6NFE2 RNA5SP54-201ENST00000516951 92 ntBASIC0.98□□□□□ -2.25
SMCO2A6NFE2 MTND1P35-201ENST00000526739 508 ntBASIC0.98□□□□□ -2.25
SMCO2A6NFE2 MIR4452-201ENST00000583004 71 ntBASIC0.98□□□□□ -2.25
SMCO2A6NFE2 FAM71BP1-201ENST00000604431 523 ntBASIC0.98□□□□□ -2.25
SMCO2A6NFE2 AC097065.2-201ENST00000608159 533 ntBASIC0.98□□□□□ -2.25
SMCO2A6NFE2 AL078596.1-201ENST00000624856 447 ntBASIC0.98□□□□□ -2.25
SMCO2A6NFE2 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
SMCO2A6NFE2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
SMCO2A6NFE2 SNORD113-7-201ENST00000363762 77 ntBASIC0.97□□□□□ -2.25
SMCO2A6NFE2 RNU6-1322P-201ENST00000364309 107 ntBASIC0.97□□□□□ -2.25
SMCO2A6NFE2 RNU6-1240P-201ENST00000365155 104 ntBASIC0.97□□□□□ -2.25
SMCO2A6NFE2 SNORA69-201ENST00000383895 132 ntBASIC0.97□□□□□ -2.25
SMCO2A6NFE2 RNU6-214P-201ENST00000384130 107 ntBASIC0.97□□□□□ -2.25
SMCO2A6NFE2 MIR487A-201ENST00000385009 80 ntBASIC0.97□□□□□ -2.25
SMCO2A6NFE2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
SMCO2A6NFE2 MIR320B2-201ENST00000408479 138 ntBASIC0.97□□□□□ -2.25
SMCO2A6NFE2 MTCO1P19-201ENST00000443487 500 ntBASIC0.97□□□□□ -2.25
SMCO2A6NFE2 MTND3P16-201ENST00000452205 344 ntBASIC0.97□□□□□ -2.25
SMCO2A6NFE2 RPL39P28-201ENST00000465655 155 ntBASIC0.97□□□□□ -2.25
SMCO2A6NFE2 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.97□□□□□ -2.25
SMCO2A6NFE2 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms