Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 SNORA26.9-201ENST00000391322 122 ntBASIC1.86□□□□□ -2.11
TRIM49BA6NDI0 MIR1262-201ENST00000408276 93 ntBASIC1.86□□□□□ -2.11
TRIM49BA6NDI0 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.86□□□□□ -2.11
TRIM49BA6NDI0 CYCSP49-201ENST00000420810 319 ntBASIC1.86□□□□□ -2.11
TRIM49BA6NDI0 RPL23AP50-201ENST00000434149 455 ntBASIC1.86□□□□□ -2.11
TRIM49BA6NDI0 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.86□□□□□ -2.11
TRIM49BA6NDI0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.86□□□□□ -2.11
TRIM49BA6NDI0 AC115990.1-201ENST00000526957 301 ntBASIC1.86□□□□□ -2.11
TRIM49BA6NDI0 MIR5701-3-201ENST00000578890 82 ntBASIC1.86□□□□□ -2.11
TRIM49BA6NDI0 MIR5701-1-201ENST00000585138 82 ntBASIC1.86□□□□□ -2.11
TRIM49BA6NDI0 AC016727.2-201ENST00000603988 621 ntBASIC1.86□□□□□ -2.11
TRIM49BA6NDI0 CYP2C61P-201ENST00000604072 290 ntBASIC1.86□□□□□ -2.11
TRIM49BA6NDI0 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.86□□□□□ -2.11
TRIM49BA6NDI0 MIR5701-2-201ENST00000615634 82 ntBASIC1.86□□□□□ -2.11
TRIM49BA6NDI0 AL353997.5-201ENST00000618886 171 ntBASIC1.86□□□□□ -2.11
TRIM49BA6NDI0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
TRIM49BA6NDI0 RNY1P16-201ENST00000363063 111 ntBASIC1.85□□□□□ -2.11
TRIM49BA6NDI0 RNU6-1040P-201ENST00000383974 107 ntBASIC1.85□□□□□ -2.11
TRIM49BA6NDI0 RNU6-708P-201ENST00000384217 107 ntBASIC1.85□□□□□ -2.11
TRIM49BA6NDI0 RNA5SP201-201ENST00000410316 124 ntBASIC1.85□□□□□ -2.11
TRIM49BA6NDI0 Y_RNA.597-201ENST00000410463 100 ntBASIC1.85□□□□□ -2.11
TRIM49BA6NDI0 NCOR1P3-201ENST00000420479 303 ntBASIC1.85□□□□□ -2.11
TRIM49BA6NDI0 BX510359.4-201ENST00000423750 193 ntBASIC1.85□□□□□ -2.11
TRIM49BA6NDI0 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.85□□□□□ -2.11
TRIM49BA6NDI0 AL160004.2-201ENST00000432935 350 ntBASIC1.85□□□□□ -2.11
TRIM49BA6NDI0 AL603825.1-201ENST00000438481 80 ntBASIC1.85□□□□□ -2.11
TRIM49BA6NDI0 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.85□□□□□ -2.11
TRIM49BA6NDI0 UBE2V1P7-201ENST00000446395 340 ntBASIC1.85□□□□□ -2.11
TRIM49BA6NDI0 RNU7-169P-201ENST00000459456 61 ntBASIC1.85□□□□□ -2.11
TRIM49BA6NDI0 RNA5SP57-201ENST00000459463 123 ntBASIC1.85□□□□□ -2.11
TRIM49BA6NDI0 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.85□□□□□ -2.11
TRIM49BA6NDI0 HMGN1P13-201ENST00000505795 138 ntBASIC1.85□□□□□ -2.11
TRIM49BA6NDI0 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.85□□□□□ -2.11
TRIM49BA6NDI0 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.85□□□□□ -2.11
TRIM49BA6NDI0 Y_RNA.701-201ENST00000516812 110 ntBASIC1.85□□□□□ -2.11
TRIM49BA6NDI0 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.85□□□□□ -2.11
TRIM49BA6NDI0 AL356055.1-201ENST00000602528 446 ntBASIC1.85□□□□□ -2.11
TRIM49BA6NDI0 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.85□□□□□ -2.11
TRIM49BA6NDI0 AL080274.1-201ENST00000605565 220 ntBASIC1.85□□□□□ -2.11
TRIM49BA6NDI0 AC090574.1-201ENST00000623186 233 ntBASIC1.85□□□□□ -2.11
TRIM49BA6NDI0 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
TRIM49BA6NDI0 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
TRIM49BA6NDI0 ZNF299P-201ENST00000406845 1804 ntBASIC1.84□□□□□ -2.11
TRIM49BA6NDI0 RNU6-743P-201ENST00000364151 106 ntBASIC1.84□□□□□ -2.11
TRIM49BA6NDI0 MIR208B-201ENST00000401172 77 ntBASIC1.84□□□□□ -2.11
TRIM49BA6NDI0 MIR1283-2-201ENST00000408621 87 ntBASIC1.84□□□□□ -2.11
TRIM49BA6NDI0 EIF4EP2-201ENST00000422816 654 ntBASIC1.84□□□□□ -2.11
TRIM49BA6NDI0 PMCHL1-202ENST00000423102 261 ntBASIC1.84□□□□□ -2.11
TRIM49BA6NDI0 AC092423.1-201ENST00000430165 186 ntBASIC1.84□□□□□ -2.11
TRIM49BA6NDI0 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.84□□□□□ -2.11
TRIM49BA6NDI0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.84□□□□□ -2.11
TRIM49BA6NDI0 AP000870.1-201ENST00000472927 406 ntBASIC1.84□□□□□ -2.11
TRIM49BA6NDI0 AC016632.1-201ENST00000503994 196 ntBASIC1.84□□□□□ -2.11
TRIM49BA6NDI0 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.84□□□□□ -2.11
TRIM49BA6NDI0 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.84□□□□□ -2.11
TRIM49BA6NDI0 RNU6-470P-201ENST00000515954 104 ntBASIC1.84□□□□□ -2.11
TRIM49BA6NDI0 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.84□□□□□ -2.11
TRIM49BA6NDI0 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.84□□□□□ -2.11
TRIM49BA6NDI0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.84□□□□□ -2.11
TRIM49BA6NDI0 AC020661.2-201ENST00000560114 134 ntBASIC1.84□□□□□ -2.11
TRIM49BA6NDI0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.84□□□□□ -2.11
TRIM49BA6NDI0 MIR5690-201ENST00000583739 73 ntBASIC1.84□□□□□ -2.11
TRIM49BA6NDI0 AC012493.3-201ENST00000604494 112 ntBASIC1.84□□□□□ -2.11
TRIM49BA6NDI0 AC087588.2-201ENST00000617667 426 ntBASIC1.84□□□□□ -2.11
TRIM49BA6NDI0 uc_338.22-201ENST00000622722 187 ntBASIC1.84□□□□□ -2.11
TRIM49BA6NDI0 SCARNA4-201ENST00000629045 128 ntBASIC1.84□□□□□ -2.11
TRIM49BA6NDI0 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
TRIM49BA6NDI0 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.84□□□□□ -2.12
TRIM49BA6NDI0 RNU1-58P-201ENST00000362413 163 ntBASIC1.83□□□□□ -2.12
TRIM49BA6NDI0 Y_RNA.99-201ENST00000363138 105 ntBASIC1.83□□□□□ -2.12
TRIM49BA6NDI0 RNU6-596P-201ENST00000365395 98 ntBASIC1.83□□□□□ -2.12
TRIM49BA6NDI0 RNU6-26P-201ENST00000383985 107 ntBASIC1.83□□□□□ -2.12
TRIM49BA6NDI0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
TRIM49BA6NDI0 SNORA12.2-201ENST00000391040 156 ntBASIC1.83□□□□□ -2.12
TRIM49BA6NDI0 MTCO2P27-201ENST00000420740 428 ntBASIC1.83□□□□□ -2.12
TRIM49BA6NDI0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.83□□□□□ -2.12
TRIM49BA6NDI0 AC012306.1-201ENST00000423267 114 ntBASIC1.83□□□□□ -2.12
TRIM49BA6NDI0 MTCO2P12-201ENST00000427426 682 ntBASIC1.83□□□□□ -2.12
TRIM49BA6NDI0 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.83□□□□□ -2.12
TRIM49BA6NDI0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.83□□□□□ -2.12
TRIM49BA6NDI0 RNU6-250P-201ENST00000516958 103 ntBASIC1.83□□□□□ -2.12
TRIM49BA6NDI0 AP005660.1-201ENST00000522972 293 ntBASIC1.83□□□□□ -2.12
TRIM49BA6NDI0 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.83□□□□□ -2.12
TRIM49BA6NDI0 AC027288.2-201ENST00000553028 243 ntBASIC1.83□□□□□ -2.12
TRIM49BA6NDI0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.83□□□□□ -2.12
TRIM49BA6NDI0 RNA5SP361-201ENST00000362686 118 ntBASIC1.82□□□□□ -2.12
TRIM49BA6NDI0 Y_RNA.106-201ENST00000363189 100 ntBASIC1.82□□□□□ -2.12
TRIM49BA6NDI0 Y_RNA.148-201ENST00000363557 117 ntBASIC1.82□□□□□ -2.12
TRIM49BA6NDI0 Y_RNA.187-201ENST00000363918 113 ntBASIC1.82□□□□□ -2.12
TRIM49BA6NDI0 RNU6-1093P-201ENST00000391194 107 ntBASIC1.82□□□□□ -2.12
TRIM49BA6NDI0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
TRIM49BA6NDI0 AC236972.2-201ENST00000434979 310 ntBASIC1.82□□□□□ -2.12
TRIM49BA6NDI0 OR2AQ1P-201ENST00000451972 200 ntBASIC1.82□□□□□ -2.12
TRIM49BA6NDI0 RNU7-87P-201ENST00000459343 62 ntBASIC1.82□□□□□ -2.12
TRIM49BA6NDI0 ATP5EP1-201ENST00000510257 156 ntBASIC1.82□□□□□ -2.12
TRIM49BA6NDI0 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.82□□□□□ -2.12
TRIM49BA6NDI0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.82□□□□□ -2.12
TRIM49BA6NDI0 AC004584.2-201ENST00000570407 410 ntBASIC1.82□□□□□ -2.12
TRIM49BA6NDI0 MIR4713-201ENST00000582691 75 ntBASIC1.82□□□□□ -2.12
TRIM49BA6NDI0 PCGEM1.1-201ENST00000613431 131 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms