Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 Y_RNA.88-201ENST00000363029 99 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 Y_RNA.99-201ENST00000363138 105 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 RNU6-23P-201ENST00000363283 107 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 Y_RNA.224-201ENST00000364308 111 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 SNORD81.2-201ENST00000365153 76 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 Y_RNA.404-201ENST00000383978 102 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 Y_RNA.405-201ENST00000383979 100 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 Y_RNA.451-201ENST00000384200 100 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 RNU6-1026P-201ENST00000384465 108 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 Y_RNA.524-201ENST00000384564 100 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 Y_RNA.561-201ENST00000384694 100 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 Y_RNA.594-201ENST00000410373 140 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 RNU6-1050P-201ENST00000410388 107 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 RNA5SP501-201ENST00000410990 112 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 AC074085.1-201ENST00000413598 418 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 AL158823.1-201ENST00000418441 478 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 RPL21P111-201ENST00000418453 477 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 AC123900.1-201ENST00000420390 96 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 AC245102.2-201ENST00000448956 180 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 MTND3P10-201ENST00000450967 341 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 SNORD5.1-201ENST00000458800 75 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 RNU6-120P-201ENST00000516077 103 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 RNVU1-2-201ENST00000516326 135 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 RNA5SP384-201ENST00000516615 116 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 MIR3169-201ENST00000578032 83 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 MIR5696-201ENST00000578474 85 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 AC018462.2-201ENST00000605375 395 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 AL773524.1-201ENST00000614065 229 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 AL157834.3-201ENST00000615543 103 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 AC137590.2-201ENST00000619709 240 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 LINC02555-201ENST00000563933 1951 ntBASIC1.37□□□□□ -2.19
NKX2-6A6NCS4 Y_RNA.122-201ENST00000363331 96 ntBASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 RNU4-9P-201ENST00000364951 139 ntBASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 SNORD31B-201ENST00000364977 69 ntBASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 RNU6-601P-201ENST00000384540 107 ntBASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 RNU6-160P-201ENST00000384591 107 ntBASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 MIR29C-201ENST00000385231 88 ntBASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 AC243428.1-201ENST00000421099 264 ntBASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 EIF4EP2-201ENST00000422816 654 ntBASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 AL353997.1-201ENST00000432936 108 ntBASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 snoU13.30-201ENST00000458951 104 ntBASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 AC010531.2-201ENST00000465012 153 ntBASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 AC027575.1-201ENST00000481064 460 ntBASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 HMGN1P12-201ENST00000499125 195 ntBASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 RNU1-117P-201ENST00000517041 158 ntBASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 RNU6-58P-201ENST00000517143 103 ntBASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 RRN3P3-201ENST00000549207 578 ntBASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 AL161670.1-201ENST00000554348 137 ntBASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 AC005668.1-201ENST00000571142 476 ntBASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 AC009229.3-201ENST00000608056 282 ntBASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 RMST_6.1-201ENST00000611980 203 ntBASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 TCL6_2.1-201ENST00000615162 119 ntBASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 AC022513.1-201ENST00000624512 117 ntBASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
NKX2-6A6NCS4 ZNF209P-201ENST00000593450 2304 ntBASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 MIR126-201ENST00000362291 85 ntBASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 RNU6-222P-201ENST00000362438 107 ntBASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 RNU6-727P-201ENST00000363592 107 ntBASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 Y_RNA.303-201ENST00000364998 94 ntBASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 MIR517C-201ENST00000385103 95 ntBASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 RPL37P10-201ENST00000412884 288 ntBASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 RPS26P42-201ENST00000413485 326 ntBASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 AC138393.2-201ENST00000414742 246 ntBASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 AC244636.1-201ENST00000421152 228 ntBASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 AC245517.4-201ENST00000448601 281 ntBASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 AC107399.1-201ENST00000451226 265 ntBASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 AC016925.1-201ENST00000458303 298 ntBASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 RNA5SP57-201ENST00000459463 123 ntBASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 RNU6-1016P-201ENST00000516689 94 ntBASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 SNORA31.24-201ENST00000517232 57 ntBASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 AC027288.2-201ENST00000553028 243 ntBASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 MIR4421-201ENST00000578133 69 ntBASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 AL355802.3-201ENST00000607571 545 ntBASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 AC005014.2-201ENST00000607795 599 ntBASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.35□□□□□ -2.19
NKX2-6A6NCS4 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
NKX2-6A6NCS4 WWP1P1-201ENST00000466609 2769 ntBASIC1.34□□□□□ -2.19
NKX2-6A6NCS4 Y_RNA.116-201ENST00000363292 103 ntBASIC1.34□□□□□ -2.19
NKX2-6A6NCS4 RNU6-595P-201ENST00000363944 107 ntBASIC1.34□□□□□ -2.19
NKX2-6A6NCS4 RNU4-13P-201ENST00000364019 141 ntBASIC1.34□□□□□ -2.19
NKX2-6A6NCS4 RNU6-1305P-201ENST00000364353 104 ntBASIC1.34□□□□□ -2.19
NKX2-6A6NCS4 SNORD87-201ENST00000364849 89 ntBASIC1.34□□□□□ -2.19
NKX2-6A6NCS4 RNU6-392P-201ENST00000364926 101 ntBASIC1.34□□□□□ -2.19
NKX2-6A6NCS4 MIR1283-1-201ENST00000408494 87 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 180.8 ms