Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC027288.2-201ENST00000553028 243 ntBASIC1.46□□□□□ -2.18
SMIM28A0A1B0GU29 SUB1P4-201ENST00000566062 339 ntBASIC1.46□□□□□ -2.18
SMIM28A0A1B0GU29 MIR3198-2-201ENST00000577868 80 ntBASIC1.46□□□□□ -2.18
SMIM28A0A1B0GU29 MIR5094-201ENST00000578766 85 ntBASIC1.46□□□□□ -2.18
SMIM28A0A1B0GU29 MIR4781-201ENST00000585250 76 ntBASIC1.46□□□□□ -2.18
SMIM28A0A1B0GU29 AC083806.3-201ENST00000614016 455 ntBASIC1.46□□□□□ -2.18
SMIM28A0A1B0GU29 AL353770.2-201ENST00000620024 78 ntBASIC1.46□□□□□ -2.18
SMIM28A0A1B0GU29 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.46□□□□□ -2.18
SMIM28A0A1B0GU29 SNORD115-32-201ENST00000364079 82 ntBASIC1.45□□□□□ -2.18
SMIM28A0A1B0GU29 RNU4-9P-201ENST00000364951 139 ntBASIC1.45□□□□□ -2.18
SMIM28A0A1B0GU29 Y_RNA.327-201ENST00000365201 102 ntBASIC1.45□□□□□ -2.18
SMIM28A0A1B0GU29 MIR32-201ENST00000384965 70 ntBASIC1.45□□□□□ -2.18
SMIM28A0A1B0GU29 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
SMIM28A0A1B0GU29 AL356776.1-201ENST00000406574 447 ntBASIC1.45□□□□□ -2.18
SMIM28A0A1B0GU29 Y_RNA.599-201ENST00000410489 109 ntBASIC1.45□□□□□ -2.18
SMIM28A0A1B0GU29 RN7SKP51-201ENST00000410781 304 ntBASIC1.45□□□□□ -2.18
SMIM28A0A1B0GU29 Y_RNA.619-201ENST00000410951 90 ntBASIC1.45□□□□□ -2.18
SMIM28A0A1B0GU29 MTCO3P29-201ENST00000432119 779 ntBASIC1.45□□□□□ -2.18
SMIM28A0A1B0GU29 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.45□□□□□ -2.18
SMIM28A0A1B0GU29 AL357134.1-201ENST00000445848 426 ntBASIC1.45□□□□□ -2.18
SMIM28A0A1B0GU29 AC007395.1-201ENST00000451333 677 ntBASIC1.45□□□□□ -2.18
SMIM28A0A1B0GU29 RNU6-329P-201ENST00000459618 107 ntBASIC1.45□□□□□ -2.18
SMIM28A0A1B0GU29 SNORA31.17-201ENST00000516953 127 ntBASIC1.45□□□□□ -2.18
SMIM28A0A1B0GU29 AF235103.2-201ENST00000525753 346 ntBASIC1.45□□□□□ -2.18
SMIM28A0A1B0GU29 MIR4790-201ENST00000577799 79 ntBASIC1.45□□□□□ -2.18
SMIM28A0A1B0GU29 MIR5696-201ENST00000578474 85 ntBASIC1.45□□□□□ -2.18
SMIM28A0A1B0GU29 AL157834.3-201ENST00000615543 103 ntBASIC1.45□□□□□ -2.18
SMIM28A0A1B0GU29 BX322639.1-202ENST00000423987 2213 ntBASIC1.45□□□□□ -2.18
SMIM28A0A1B0GU29 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SMIM28A0A1B0GU29 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 AL159152.1-201ENST00000635019 2587 ntBASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 SNORD115-8-201ENST00000363856 82 ntBASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 SNORD115-38-201ENST00000365037 82 ntBASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 SNORA67.2-201ENST00000384300 149 ntBASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 AL117342.1-201ENST00000404861 406 ntBASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 AC060773.1-201ENST00000421698 310 ntBASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 AC245047.4-201ENST00000433189 144 ntBASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 MTND4LP16-201ENST00000440828 295 ntBASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 RNU1-123P-201ENST00000458950 160 ntBASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 RNA5SP61-201ENST00000516453 100 ntBASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 Y_RNA.682-201ENST00000516457 100 ntBASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 RNU6-358P-201ENST00000516564 75 ntBASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 MTND4LP26-201ENST00000518144 282 ntBASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 AC084364.2-201ENST00000546924 395 ntBASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 RRN3P3-201ENST00000549207 578 ntBASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 UBL5P4-201ENST00000562584 236 ntBASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 AC093913.1-201ENST00000614178 329 ntBASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 MIR6128-201ENST00000615528 109 ntBASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 AC137590.2-201ENST00000619709 240 ntBASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 AC008873.1-201ENST00000625051 138 ntBASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 AC068205.3-201ENST00000636385 468 ntBASIC1.44□□□□□ -2.18
SMIM28A0A1B0GU29 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SMIM28A0A1B0GU29 Y_RNA.48-201ENST00000362710 103 ntBASIC1.43□□□□□ -2.18
SMIM28A0A1B0GU29 RNU6-862P-201ENST00000362804 105 ntBASIC1.43□□□□□ -2.18
SMIM28A0A1B0GU29 RNU6-112P-201ENST00000363599 104 ntBASIC1.43□□□□□ -2.18
SMIM28A0A1B0GU29 SNORA33-201ENST00000363664 130 ntBASIC1.43□□□□□ -2.18
SMIM28A0A1B0GU29 RNU6-203P-201ENST00000384038 104 ntBASIC1.43□□□□□ -2.18
SMIM28A0A1B0GU29 RNU6-296P-201ENST00000384608 107 ntBASIC1.43□□□□□ -2.18
SMIM28A0A1B0GU29 MIR300-201ENST00000401138 83 ntBASIC1.43□□□□□ -2.18
SMIM28A0A1B0GU29 MIR934-201ENST00000401241 83 ntBASIC1.43□□□□□ -2.18
SMIM28A0A1B0GU29 MIR548F5-201ENST00000408421 86 ntBASIC1.43□□□□□ -2.18
SMIM28A0A1B0GU29 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.43□□□□□ -2.18
SMIM28A0A1B0GU29 ATP5J2P3-201ENST00000451550 258 ntBASIC1.43□□□□□ -2.18
SMIM28A0A1B0GU29 AC112492.4-201ENST00000456549 352 ntBASIC1.43□□□□□ -2.18
SMIM28A0A1B0GU29 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.43□□□□□ -2.18
SMIM28A0A1B0GU29 AC004223.1-201ENST00000479840 271 ntBASIC1.43□□□□□ -2.18
SMIM28A0A1B0GU29 AC018710.1-201ENST00000506509 158 ntBASIC1.43□□□□□ -2.18
SMIM28A0A1B0GU29 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.43□□□□□ -2.18
SMIM28A0A1B0GU29 AC067942.3-201ENST00000512025 362 ntBASIC1.43□□□□□ -2.18
SMIM28A0A1B0GU29 RNU6-1041P-201ENST00000516254 102 ntBASIC1.43□□□□□ -2.18
SMIM28A0A1B0GU29 SUMO2P18-201ENST00000518873 252 ntBASIC1.43□□□□□ -2.18
SMIM28A0A1B0GU29 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.43□□□□□ -2.18
SMIM28A0A1B0GU29 AP003465.2-201ENST00000602571 373 ntBASIC1.43□□□□□ -2.18
SMIM28A0A1B0GU29 AC010900.2-201ENST00000604508 210 ntBASIC1.43□□□□□ -2.18
SMIM28A0A1B0GU29 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SMIM28A0A1B0GU29 RNU6-873P-201ENST00000363833 107 ntBASIC1.42□□□□□ -2.18
SMIM28A0A1B0GU29 Y_RNA.184-201ENST00000363884 108 ntBASIC1.42□□□□□ -2.18
SMIM28A0A1B0GU29 RNU6-392P-201ENST00000364926 101 ntBASIC1.42□□□□□ -2.18
SMIM28A0A1B0GU29 Y_RNA.319-201ENST00000365138 92 ntBASIC1.42□□□□□ -2.18
SMIM28A0A1B0GU29 SNORD5.1-201ENST00000458800 75 ntBASIC1.42□□□□□ -2.18
SMIM28A0A1B0GU29 snoU13.30-201ENST00000458951 104 ntBASIC1.42□□□□□ -2.18
SMIM28A0A1B0GU29 AC026782.1-201ENST00000512952 449 ntBASIC1.42□□□□□ -2.18
SMIM28A0A1B0GU29 RNU1-117P-201ENST00000517041 158 ntBASIC1.42□□□□□ -2.18
SMIM28A0A1B0GU29 RNU6-58P-201ENST00000517143 103 ntBASIC1.42□□□□□ -2.18
SMIM28A0A1B0GU29 RNA5SP437-201ENST00000517249 129 ntBASIC1.42□□□□□ -2.18
SMIM28A0A1B0GU29 CBX3P8-201ENST00000532412 525 ntBASIC1.42□□□□□ -2.18
SMIM28A0A1B0GU29 AK6P2-201ENST00000549020 471 ntBASIC1.42□□□□□ -2.18
SMIM28A0A1B0GU29 MIR3660-201ENST00000584845 100 ntBASIC1.42□□□□□ -2.18
SMIM28A0A1B0GU29 MIR4753-201ENST00000585119 83 ntBASIC1.42□□□□□ -2.18
SMIM28A0A1B0GU29 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.42□□□□□ -2.18
SMIM28A0A1B0GU29 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.42□□□□□ -2.18
SMIM28A0A1B0GU29 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 146.8 ms