Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 SNORA25B-201ENST00000365507 128 ntBASIC2.84□□□□□ -1.95
PCDHGA3Q9Y5H0 RNU6-1264P-201ENST00000383891 107 ntBASIC2.84□□□□□ -1.95
PCDHGA3Q9Y5H0 RNU6-713P-201ENST00000384761 107 ntBASIC2.84□□□□□ -1.95
PCDHGA3Q9Y5H0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
PCDHGA3Q9Y5H0 RNA5SP475-201ENST00000410568 110 ntBASIC2.84□□□□□ -1.95
PCDHGA3Q9Y5H0 RPL19P1-201ENST00000411635 428 ntBASIC2.84□□□□□ -1.95
PCDHGA3Q9Y5H0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.84□□□□□ -1.95
PCDHGA3Q9Y5H0 AC105272.1-201ENST00000438604 198 ntBASIC2.84□□□□□ -1.95
PCDHGA3Q9Y5H0 RNU6-408P-201ENST00000515910 100 ntBASIC2.84□□□□□ -1.95
PCDHGA3Q9Y5H0 MIR449C-201ENST00000516047 92 ntBASIC2.84□□□□□ -1.95
PCDHGA3Q9Y5H0 RNU6-965P-201ENST00000516721 96 ntBASIC2.84□□□□□ -1.95
PCDHGA3Q9Y5H0 RNU1-117P-201ENST00000517041 158 ntBASIC2.84□□□□□ -1.95
PCDHGA3Q9Y5H0 RNA5SP490-201ENST00000517141 136 ntBASIC2.84□□□□□ -1.95
PCDHGA3Q9Y5H0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.84□□□□□ -1.95
PCDHGA3Q9Y5H0 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.84□□□□□ -1.95
PCDHGA3Q9Y5H0 MIR3684-201ENST00000579779 74 ntBASIC2.84□□□□□ -1.95
PCDHGA3Q9Y5H0 RAC1P9-201ENST00000604990 392 ntBASIC2.84□□□□□ -1.95
PCDHGA3Q9Y5H0 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.84□□□□□ -1.95
PCDHGA3Q9Y5H0 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
PCDHGA3Q9Y5H0 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.84□□□□□ -1.96
PCDHGA3Q9Y5H0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.84□□□□□ -1.96
PCDHGA3Q9Y5H0 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
PCDHGA3Q9Y5H0 RNU6-1305P-201ENST00000364353 104 ntBASIC2.83□□□□□ -1.96
PCDHGA3Q9Y5H0 RNU1-109P-201ENST00000383960 147 ntBASIC2.83□□□□□ -1.96
PCDHGA3Q9Y5H0 SNORA67.2-201ENST00000384300 149 ntBASIC2.83□□□□□ -1.96
PCDHGA3Q9Y5H0 Y_RNA.556-201ENST00000384677 113 ntBASIC2.83□□□□□ -1.96
PCDHGA3Q9Y5H0 Y_RNA.574-201ENST00000384766 95 ntBASIC2.83□□□□□ -1.96
PCDHGA3Q9Y5H0 AL079342.1-201ENST00000401460 267 ntBASIC2.83□□□□□ -1.96
PCDHGA3Q9Y5H0 RNA5SP184-201ENST00000411071 108 ntBASIC2.83□□□□□ -1.96
PCDHGA3Q9Y5H0 AC004866.1-201ENST00000411748 78 ntBASIC2.83□□□□□ -1.96
PCDHGA3Q9Y5H0 TOMM22P2-201ENST00000430735 237 ntBASIC2.83□□□□□ -1.96
PCDHGA3Q9Y5H0 HMGN2P18-201ENST00000450680 270 ntBASIC2.83□□□□□ -1.96
PCDHGA3Q9Y5H0 AL137159.1-201ENST00000452808 512 ntBASIC2.83□□□□□ -1.96
PCDHGA3Q9Y5H0 RN7SL429P-201ENST00000479090 223 ntBASIC2.83□□□□□ -1.96
PCDHGA3Q9Y5H0 RN7SL489P-201ENST00000486185 223 ntBASIC2.83□□□□□ -1.96
PCDHGA3Q9Y5H0 RN7SL327P-201ENST00000488659 223 ntBASIC2.83□□□□□ -1.96
PCDHGA3Q9Y5H0 MTCO2P24-201ENST00000515611 426 ntBASIC2.83□□□□□ -1.96
PCDHGA3Q9Y5H0 RNY3P15-201ENST00000516297 97 ntBASIC2.83□□□□□ -1.96
PCDHGA3Q9Y5H0 RNU2-34P-201ENST00000516534 121 ntBASIC2.83□□□□□ -1.96
PCDHGA3Q9Y5H0 RNU6-1046P-201ENST00000516538 107 ntBASIC2.83□□□□□ -1.96
PCDHGA3Q9Y5H0 AK6P2-201ENST00000549020 471 ntBASIC2.83□□□□□ -1.96
PCDHGA3Q9Y5H0 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.83□□□□□ -1.96
PCDHGA3Q9Y5H0 RN7SL853P-201ENST00000617250 223 ntBASIC2.83□□□□□ -1.96
PCDHGA3Q9Y5H0 MIR1248-201ENST00000629190 106 ntBASIC2.83□□□□□ -1.96
PCDHGA3Q9Y5H0 RNU6-626P-201ENST00000363354 107 ntBASIC2.82□□□□□ -1.96
PCDHGA3Q9Y5H0 Y_RNA.214-201ENST00000364201 112 ntBASIC2.82□□□□□ -1.96
PCDHGA3Q9Y5H0 Y_RNA.415-201ENST00000384012 112 ntBASIC2.82□□□□□ -1.96
PCDHGA3Q9Y5H0 RPL21P1-201ENST00000399532 476 ntBASIC2.82□□□□□ -1.96
PCDHGA3Q9Y5H0 SRIP3-201ENST00000413200 219 ntBASIC2.82□□□□□ -1.96
PCDHGA3Q9Y5H0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC2.82□□□□□ -1.96
PCDHGA3Q9Y5H0 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.82□□□□□ -1.96
PCDHGA3Q9Y5H0 AC245102.2-201ENST00000448956 180 ntBASIC2.82□□□□□ -1.96
PCDHGA3Q9Y5H0 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.82□□□□□ -1.96
PCDHGA3Q9Y5H0 AC016925.1-201ENST00000458303 298 ntBASIC2.82□□□□□ -1.96
PCDHGA3Q9Y5H0 RPL26P26-201ENST00000480251 434 ntBASIC2.82□□□□□ -1.96
PCDHGA3Q9Y5H0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.82□□□□□ -1.96
PCDHGA3Q9Y5H0 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
PCDHGA3Q9Y5H0 SCGB1D5P-201ENST00000515134 247 ntBASIC2.82□□□□□ -1.96
PCDHGA3Q9Y5H0 RNU6-397P-201ENST00000516226 104 ntBASIC2.82□□□□□ -1.96
PCDHGA3Q9Y5H0 RNU6-948P-201ENST00000516374 107 ntBASIC2.82□□□□□ -1.96
PCDHGA3Q9Y5H0 RNU6-107P-201ENST00000516643 102 ntBASIC2.82□□□□□ -1.96
PCDHGA3Q9Y5H0 RNU6-826P-201ENST00000516827 104 ntBASIC2.82□□□□□ -1.96
PCDHGA3Q9Y5H0 NDUFA5P6-201ENST00000542110 379 ntBASIC2.82□□□□□ -1.96
PCDHGA3Q9Y5H0 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.82□□□□□ -1.96
PCDHGA3Q9Y5H0 AC005176.2-201ENST00000596933 147 ntBASIC2.82□□□□□ -1.96
PCDHGA3Q9Y5H0 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
PCDHGA3Q9Y5H0 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
PCDHGA3Q9Y5H0 SNORA72.2-201ENST00000365028 127 ntBASIC2.81□□□□□ -1.96
PCDHGA3Q9Y5H0 ELOCP21-201ENST00000412558 336 ntBASIC2.81□□□□□ -1.96
PCDHGA3Q9Y5H0 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.81□□□□□ -1.96
PCDHGA3Q9Y5H0 MTCYBP9-201ENST00000431021 303 ntBASIC2.81□□□□□ -1.96
PCDHGA3Q9Y5H0 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC2.81□□□□□ -1.96
PCDHGA3Q9Y5H0 MTATP8P1-201ENST00000467115 207 ntBASIC2.81□□□□□ -1.96
PCDHGA3Q9Y5H0 RPS27AP9-201ENST00000477681 438 ntBASIC2.81□□□□□ -1.96
PCDHGA3Q9Y5H0 RNU6-667P-201ENST00000517186 102 ntBASIC2.81□□□□□ -1.96
PCDHGA3Q9Y5H0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.81□□□□□ -1.96
PCDHGA3Q9Y5H0 AC011476.5-201ENST00000615594 130 ntBASIC2.81□□□□□ -1.96
PCDHGA3Q9Y5H0 MIR3674-201ENST00000636576 68 ntBASIC2.81□□□□□ -1.96
PCDHGA3Q9Y5H0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
PCDHGA3Q9Y5H0 AC080100.1-201ENST00000624239 5356 ntBASIC2.81□□□□□ -1.96
PCDHGA3Q9Y5H0 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
PCDHGA3Q9Y5H0 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.8□□□□□ -1.96
PCDHGA3Q9Y5H0 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
PCDHGA3Q9Y5H0 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
PCDHGA3Q9Y5H0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PCDHGA3Q9Y5H0 MIR449A-201ENST00000362113 91 ntBASIC2.8□□□□□ -1.96
PCDHGA3Q9Y5H0 Y_RNA.19-201ENST00000362462 99 ntBASIC2.8□□□□□ -1.96
PCDHGA3Q9Y5H0 Y_RNA.47-201ENST00000362697 108 ntBASIC2.8□□□□□ -1.96
PCDHGA3Q9Y5H0 SNORA9.2-201ENST00000365361 133 ntBASIC2.8□□□□□ -1.96
PCDHGA3Q9Y5H0 RNU6-301P-201ENST00000384277 107 ntBASIC2.8□□□□□ -1.96
PCDHGA3Q9Y5H0 AL590004.2-201ENST00000404787 371 ntBASIC2.8□□□□□ -1.96
PCDHGA3Q9Y5H0 HMGN2P35-201ENST00000412164 270 ntBASIC2.8□□□□□ -1.96
PCDHGA3Q9Y5H0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.8□□□□□ -1.96
PCDHGA3Q9Y5H0 EDDM3CP-201ENST00000415977 425 ntBASIC2.8□□□□□ -1.96
PCDHGA3Q9Y5H0 ELOCP20-201ENST00000422460 345 ntBASIC2.8□□□□□ -1.96
PCDHGA3Q9Y5H0 RAB28P5-201ENST00000427490 651 ntBASIC2.8□□□□□ -1.96
PCDHGA3Q9Y5H0 RPS29P6-201ENST00000438196 145 ntBASIC2.8□□□□□ -1.96
PCDHGA3Q9Y5H0 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.8□□□□□ -1.96
PCDHGA3Q9Y5H0 RNU7-26P-201ENST00000458980 63 ntBASIC2.8□□□□□ -1.96
PCDHGA3Q9Y5H0 AC093259.1-201ENST00000509755 300 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 192.5 ms