Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 Z82205.1-201ENST00000428456 297 ntBASIC1.31□□□□□ -2.2
TRAPPC4Q9Y296 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAPPC4Q9Y296 AC097473.1-201ENST00000508142 408 ntBASIC1.31□□□□□ -2.2
TRAPPC4Q9Y296 RNA5SP454-201ENST00000517231 127 ntBASIC1.31□□□□□ -2.2
TRAPPC4Q9Y296 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAPPC4Q9Y296 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAPPC4Q9Y296 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAPPC4Q9Y296 MIR5696-201ENST00000578474 85 ntBASIC1.31□□□□□ -2.2
TRAPPC4Q9Y296 MIR4524B-201ENST00000581569 115 ntBASIC1.31□□□□□ -2.2
TRAPPC4Q9Y296 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.31□□□□□ -2.2
TRAPPC4Q9Y296 AC018638.8-201ENST00000588755 281 ntBASIC1.31□□□□□ -2.2
TRAPPC4Q9Y296 AC068790.6-201ENST00000602558 258 ntBASIC1.31□□□□□ -2.2
TRAPPC4Q9Y296 SNRPGP20-201ENST00000604477 205 ntBASIC1.31□□□□□ -2.2
TRAPPC4Q9Y296 AC007014.2-201ENST00000615581 479 ntBASIC1.31□□□□□ -2.2
TRAPPC4Q9Y296 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.31□□□□□ -2.2
TRAPPC4Q9Y296 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.31□□□□□ -2.2
TRAPPC4Q9Y296 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
TRAPPC4Q9Y296 AL159152.1-201ENST00000635019 2587 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 Y_RNA.132-201ENST00000363421 102 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 SNORA67.2-201ENST00000384300 149 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 MIR586-201ENST00000385035 97 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 MIR30A-201ENST00000385092 71 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 MIR549A-201ENST00000385268 96 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 RNA5SP213-201ENST00000391031 106 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-192P-201ENST00000391253 100 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 FCF1P9-201ENST00000412546 282 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 AL354695.1-201ENST00000427935 228 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 AC099677.2-201ENST00000436385 175 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 Z82188.1-201ENST00000436709 154 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 HMGB1P18-201ENST00000438801 619 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 MTND4LP16-201ENST00000440828 295 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 NFU1P2-201ENST00000448700 469 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 FGF7P6-202ENST00000451282 293 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 HMGN2P9-201ENST00000476875 229 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 AC010409.1-201ENST00000487382 476 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 RNU4-49P-201ENST00000516080 140 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-566P-201ENST00000516790 107 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 RNA5SP54-201ENST00000516951 92 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 SUMO2P18-201ENST00000518873 252 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 RRN3P3-201ENST00000549207 578 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 SNORA59B-202ENST00000578183 701 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 MIR4753-201ENST00000585119 83 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 AP003465.2-201ENST00000602571 373 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 AL353149.1-201ENST00000610667 244 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 AC008873.1-201ENST00000625051 138 ntBASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.3□□□□□ -2.2
TRAPPC4Q9Y296 ZNF72P-201ENST00000425869 1908 ntBASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-112P-201ENST00000363599 104 ntBASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-137P-201ENST00000363680 108 ntBASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 RNU4-13P-201ENST00000364019 141 ntBASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-245P-201ENST00000384020 107 ntBASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-418P-201ENST00000384035 107 ntBASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-1235P-201ENST00000384559 107 ntBASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-306P-201ENST00000384617 107 ntBASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-482P-201ENST00000391068 107 ntBASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 AL117342.1-201ENST00000404861 406 ntBASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-174P-201ENST00000410406 106 ntBASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 AC243428.1-201ENST00000421099 264 ntBASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 SNRPGP13-201ENST00000442212 177 ntBASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 ATP5J2P3-201ENST00000451550 258 ntBASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-498P-201ENST00000459468 107 ntBASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-344P-201ENST00000516635 111 ntBASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-273P-201ENST00000516937 96 ntBASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 AC027288.2-201ENST00000553028 243 ntBASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 AC015720.1-201ENST00000565251 277 ntBASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 AC080078.2-201ENST00000603766 501 ntBASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 AL645939.4-201ENST00000604495 135 ntBASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 AC083806.3-201ENST00000614016 455 ntBASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.29□□□□□ -2.2
TRAPPC4Q9Y296 ZNF204P-201ENST00000416749 2397 ntBASIC1.28□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-457P-201ENST00000363999 107 ntBASIC1.28□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-338P-201ENST00000383888 105 ntBASIC1.28□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-975P-201ENST00000384296 105 ntBASIC1.28□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-296P-201ENST00000384608 107 ntBASIC1.28□□□□□ -2.2
TRAPPC4Q9Y296 MIR32-201ENST00000384965 70 ntBASIC1.28□□□□□ -2.2
TRAPPC4Q9Y296 MIR320B2-201ENST00000408479 138 ntBASIC1.28□□□□□ -2.2
TRAPPC4Q9Y296 NCOR1P3-201ENST00000420479 303 ntBASIC1.28□□□□□ -2.2
TRAPPC4Q9Y296 AC015922.2-201ENST00000435593 184 ntBASIC1.28□□□□□ -2.2
TRAPPC4Q9Y296 MTATP6P13-201ENST00000438531 667 ntBASIC1.28□□□□□ -2.2
TRAPPC4Q9Y296 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAPPC4Q9Y296 snoU13.30-201ENST00000458951 104 ntBASIC1.28□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-329P-201ENST00000459618 107 ntBASIC1.28□□□□□ -2.2
TRAPPC4Q9Y296 AC114982.1-201ENST00000469402 321 ntBASIC1.28□□□□□ -2.2
TRAPPC4Q9Y296 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-1198P-201ENST00000516904 67 ntBASIC1.28□□□□□ -2.2
TRAPPC4Q9Y296 RNU6-58P-201ENST00000517143 103 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 150.4 ms