Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RNU4-35P-201ENST00000362588 141 ntBASIC4.43□□□□□ -1.7
ZC3H4Q9UPT8 SNORA80A-201ENST00000363922 136 ntBASIC4.43□□□□□ -1.7
ZC3H4Q9UPT8 RNU6-144P-201ENST00000383951 107 ntBASIC4.43□□□□□ -1.7
ZC3H4Q9UPT8 Y_RNA.525-201ENST00000384570 113 ntBASIC4.43□□□□□ -1.7
ZC3H4Q9UPT8 RN7SKP111-201ENST00000410349 271 ntBASIC4.43□□□□□ -1.7
ZC3H4Q9UPT8 AC245291.1-201ENST00000419501 328 ntBASIC4.43□□□□□ -1.7
ZC3H4Q9UPT8 AL031183.1-201ENST00000457667 207 ntBASIC4.43□□□□□ -1.7
ZC3H4Q9UPT8 AC093663.1-201ENST00000497190 394 ntBASIC4.43□□□□□ -1.7
ZC3H4Q9UPT8 YWHAEP4-201ENST00000505390 198 ntBASIC4.43□□□□□ -1.7
ZC3H4Q9UPT8 MIR5680-201ENST00000577577 84 ntBASIC4.43□□□□□ -1.7
ZC3H4Q9UPT8 U7.2-201ENST00000607576 63 ntBASIC4.43□□□□□ -1.7
ZC3H4Q9UPT8 MIR548AY-201ENST00000617669 107 ntBASIC4.43□□□□□ -1.7
ZC3H4Q9UPT8 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.43□□□□□ -1.7
ZC3H4Q9UPT8 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
ZC3H4Q9UPT8 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
ZC3H4Q9UPT8 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
ZC3H4Q9UPT8 AC069528.2-201ENST00000624849 1991 ntBASIC4.42□□□□□ -1.7
ZC3H4Q9UPT8 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ZC3H4Q9UPT8 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZC3H4Q9UPT8 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ZC3H4Q9UPT8 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZC3H4Q9UPT8 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZC3H4Q9UPT8 U8.7-201ENST00000364940 136 ntBASIC4.42□□□□□ -1.7
ZC3H4Q9UPT8 RNU6-915P-201ENST00000364943 103 ntBASIC4.42□□□□□ -1.7
ZC3H4Q9UPT8 Y_RNA.393-201ENST00000383936 102 ntBASIC4.42□□□□□ -1.7
ZC3H4Q9UPT8 MIR518C-201ENST00000384822 101 ntBASIC4.42□□□□□ -1.7
ZC3H4Q9UPT8 Y_RNA.622-201ENST00000411091 108 ntBASIC4.42□□□□□ -1.7
ZC3H4Q9UPT8 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZC3H4Q9UPT8 RAC1P2-201ENST00000511164 579 ntBASIC4.42□□□□□ -1.7
ZC3H4Q9UPT8 MIR5688-201ENST00000580619 83 ntBASIC4.42□□□□□ -1.7
ZC3H4Q9UPT8 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.42□□□□□ -1.7
ZC3H4Q9UPT8 AC006386.2-201ENST00000624491 75 ntBASIC4.42□□□□□ -1.7
ZC3H4Q9UPT8 AC012005.1-201ENST00000624575 75 ntBASIC4.42□□□□□ -1.7
ZC3H4Q9UPT8 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.41□□□□□ -1.7
ZC3H4Q9UPT8 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ZC3H4Q9UPT8 Y_RNA.124-201ENST00000363339 93 ntBASIC4.41□□□□□ -1.7
ZC3H4Q9UPT8 RNA5SP139-201ENST00000364340 117 ntBASIC4.41□□□□□ -1.7
ZC3H4Q9UPT8 RNU6-198P-201ENST00000384258 104 ntBASIC4.41□□□□□ -1.7
ZC3H4Q9UPT8 RNU6-1064P-201ENST00000410626 104 ntBASIC4.41□□□□□ -1.7
ZC3H4Q9UPT8 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC4.41□□□□□ -1.7
ZC3H4Q9UPT8 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.41□□□□□ -1.7
ZC3H4Q9UPT8 AP002884.2-201ENST00000471647 395 ntBASIC4.41□□□□□ -1.7
ZC3H4Q9UPT8 PDCD5P2-201ENST00000507570 312 ntBASIC4.41□□□□□ -1.7
ZC3H4Q9UPT8 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.41□□□□□ -1.7
ZC3H4Q9UPT8 RN7SKP179-201ENST00000516126 217 ntBASIC4.41□□□□□ -1.7
ZC3H4Q9UPT8 MIR4276-201ENST00000584832 70 ntBASIC4.41□□□□□ -1.7
ZC3H4Q9UPT8 AC104984.5-201ENST00000586878 94 ntBASIC4.41□□□□□ -1.7
ZC3H4Q9UPT8 AL670379.2-201ENST00000604983 252 ntBASIC4.41□□□□□ -1.7
ZC3H4Q9UPT8 MIR486-1-201ENST00000612171 68 ntBASIC4.41□□□□□ -1.7
ZC3H4Q9UPT8 MIR6129-201ENST00000616087 109 ntBASIC4.41□□□□□ -1.7
ZC3H4Q9UPT8 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.41□□□□□ -1.7
ZC3H4Q9UPT8 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.41□□□□□ -1.7
ZC3H4Q9UPT8 AC103988.1-201ENST00000566382 2177 ntBASIC4.41□□□□□ -1.7
ZC3H4Q9UPT8 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
ZC3H4Q9UPT8 AC006504.1-201ENST00000562493 3666 ntBASIC4.4□□□□□ -1.7
ZC3H4Q9UPT8 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
ZC3H4Q9UPT8 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.4□□□□□ -1.7
ZC3H4Q9UPT8 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.4□□□□□ -1.71
ZC3H4Q9UPT8 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ZC3H4Q9UPT8 SNORA67.2-201ENST00000384300 149 ntBASIC4.4□□□□□ -1.71
ZC3H4Q9UPT8 RNU1-57P-201ENST00000384491 166 ntBASIC4.4□□□□□ -1.71
ZC3H4Q9UPT8 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ZC3H4Q9UPT8 SNORA36B-201ENST00000410438 131 ntBASIC4.4□□□□□ -1.71
ZC3H4Q9UPT8 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.4□□□□□ -1.71
ZC3H4Q9UPT8 AC090142.3-201ENST00000519012 385 ntBASIC4.4□□□□□ -1.71
ZC3H4Q9UPT8 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.4□□□□□ -1.71
ZC3H4Q9UPT8 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC4.4□□□□□ -1.71
ZC3H4Q9UPT8 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
ZC3H4Q9UPT8 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
ZC3H4Q9UPT8 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
ZC3H4Q9UPT8 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
ZC3H4Q9UPT8 AC026241.1-201ENST00000517873 2142 ntBASIC4.39□□□□□ -1.71
ZC3H4Q9UPT8 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZC3H4Q9UPT8 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZC3H4Q9UPT8 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZC3H4Q9UPT8 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ZC3H4Q9UPT8 AL513302.2-201ENST00000562313 1842 ntBASIC4.39□□□□□ -1.71
ZC3H4Q9UPT8 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZC3H4Q9UPT8 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.39□□□□□ -1.71
ZC3H4Q9UPT8 RNA5SP432-201ENST00000362480 116 ntBASIC4.39□□□□□ -1.71
ZC3H4Q9UPT8 SNORA14A-201ENST00000364773 135 ntBASIC4.39□□□□□ -1.71
ZC3H4Q9UPT8 SNORD17-201ENST00000390930 237 ntBASIC4.39□□□□□ -1.71
ZC3H4Q9UPT8 SNORA75.5-201ENST00000391291 81 ntBASIC4.39□□□□□ -1.71
ZC3H4Q9UPT8 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.39□□□□□ -1.71
ZC3H4Q9UPT8 AC010099.1-201ENST00000455434 375 ntBASIC4.39□□□□□ -1.71
ZC3H4Q9UPT8 RPS4XP2-201ENST00000458402 793 ntBASIC4.39□□□□□ -1.71
ZC3H4Q9UPT8 RN7SL504P-201ENST00000494496 287 ntBASIC4.39□□□□□ -1.71
ZC3H4Q9UPT8 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZC3H4Q9UPT8 RPL12P50-201ENST00000603116 116 ntBASIC4.39□□□□□ -1.71
ZC3H4Q9UPT8 AP001340.1-201ENST00000624405 217 ntBASIC4.39□□□□□ -1.71
ZC3H4Q9UPT8 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
ZC3H4Q9UPT8 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
ZC3H4Q9UPT8 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
ZC3H4Q9UPT8 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
ZC3H4Q9UPT8 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ZC3H4Q9UPT8 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
ZC3H4Q9UPT8 RNY1P11-201ENST00000363759 113 ntBASIC4.38□□□□□ -1.71
ZC3H4Q9UPT8 Y_RNA.361-201ENST00000365515 120 ntBASIC4.38□□□□□ -1.71
ZC3H4Q9UPT8 RNU6-476P-201ENST00000384726 107 ntBASIC4.38□□□□□ -1.71
ZC3H4Q9UPT8 SNORA79-201ENST00000408376 140 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms