Protein–RNA interactions for Protein: Q9UMS5

PHTF1, Putative homeodomain transcription factor 1, humanhuman

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1Q9UMS5 CR769767.1-201ENST00000436337 346 ntBASIC2.59□□□□□ -1.99
PHTF1Q9UMS5 AC096638.1-201ENST00000444678 216 ntBASIC2.59□□□□□ -1.99
PHTF1Q9UMS5 AC008413.1-201ENST00000511864 177 ntBASIC2.59□□□□□ -1.99
PHTF1Q9UMS5 SNORA31.15-201ENST00000516771 132 ntBASIC2.59□□□□□ -1.99
PHTF1Q9UMS5 Y_RNA.711-201ENST00000516993 102 ntBASIC2.59□□□□□ -1.99
PHTF1Q9UMS5 SNORA31.25-201ENST00000517242 134 ntBASIC2.59□□□□□ -1.99
PHTF1Q9UMS5 AC087441.2-201ENST00000529141 262 ntBASIC2.59□□□□□ -1.99
PHTF1Q9UMS5 RRN3P3-201ENST00000549207 578 ntBASIC2.59□□□□□ -1.99
PHTF1Q9UMS5 UBL5P4-201ENST00000562584 236 ntBASIC2.59□□□□□ -1.99
PHTF1Q9UMS5 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.59□□□□□ -1.99
PHTF1Q9UMS5 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
PHTF1Q9UMS5 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PHTF1Q9UMS5 RNU6-1115P-201ENST00000362490 106 ntBASIC2.58□□□□□ -2
PHTF1Q9UMS5 SNORD115-3-201ENST00000363100 82 ntBASIC2.58□□□□□ -2
PHTF1Q9UMS5 Y_RNA.179-201ENST00000363844 90 ntBASIC2.58□□□□□ -2
PHTF1Q9UMS5 RNA5SP68-201ENST00000363885 119 ntBASIC2.58□□□□□ -2
PHTF1Q9UMS5 Y_RNA.463-201ENST00000384271 102 ntBASIC2.58□□□□□ -2
PHTF1Q9UMS5 SNORA69.1-201ENST00000390904 137 ntBASIC2.58□□□□□ -2
PHTF1Q9UMS5 SNORD23.1-201ENST00000408212 104 ntBASIC2.58□□□□□ -2
PHTF1Q9UMS5 AL135786.1-201ENST00000415892 214 ntBASIC2.58□□□□□ -2
PHTF1Q9UMS5 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.58□□□□□ -2
PHTF1Q9UMS5 AL163540.1-201ENST00000485382 386 ntBASIC2.58□□□□□ -2
PHTF1Q9UMS5 HMGB3P3-201ENST00000510526 400 ntBASIC2.58□□□□□ -2
PHTF1Q9UMS5 RNU6-120P-201ENST00000516077 103 ntBASIC2.58□□□□□ -2
PHTF1Q9UMS5 RNU6-976P-201ENST00000516086 111 ntBASIC2.58□□□□□ -2
PHTF1Q9UMS5 RNU2-34P-201ENST00000516534 121 ntBASIC2.58□□□□□ -2
PHTF1Q9UMS5 CYCSP23-201ENST00000519781 313 ntBASIC2.58□□□□□ -2
PHTF1Q9UMS5 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.58□□□□□ -2
PHTF1Q9UMS5 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.58□□□□□ -2
PHTF1Q9UMS5 AC010999.1-201ENST00000611856 324 ntBASIC2.58□□□□□ -2
PHTF1Q9UMS5 MIR1244-1-201ENST00000612829 85 ntBASIC2.58□□□□□ -2
PHTF1Q9UMS5 MIR1244-3-201ENST00000635744 85 ntBASIC2.58□□□□□ -2
PHTF1Q9UMS5 MIR1244-2-201ENST00000636449 85 ntBASIC2.58□□□□□ -2
PHTF1Q9UMS5 MIR1244-4-202ENST00000636813 85 ntBASIC2.58□□□□□ -2
PHTF1Q9UMS5 RNU6-222P-201ENST00000362438 107 ntBASIC2.57□□□□□ -2
PHTF1Q9UMS5 RNU6-545P-201ENST00000362681 104 ntBASIC2.57□□□□□ -2
PHTF1Q9UMS5 Y_RNA.202-201ENST00000364083 110 ntBASIC2.57□□□□□ -2
PHTF1Q9UMS5 Y_RNA.216-201ENST00000364205 93 ntBASIC2.57□□□□□ -2
PHTF1Q9UMS5 Y_RNA.252-201ENST00000364556 101 ntBASIC2.57□□□□□ -2
PHTF1Q9UMS5 Y_RNA.445-201ENST00000384168 102 ntBASIC2.57□□□□□ -2
PHTF1Q9UMS5 MIR518A2-201ENST00000384966 87 ntBASIC2.57□□□□□ -2
PHTF1Q9UMS5 MIR27B-201ENST00000385129 97 ntBASIC2.57□□□□□ -2
PHTF1Q9UMS5 RNA5SP465-201ENST00000391195 109 ntBASIC2.57□□□□□ -2
PHTF1Q9UMS5 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
PHTF1Q9UMS5 AC114482.1-201ENST00000418010 247 ntBASIC2.57□□□□□ -2
PHTF1Q9UMS5 AL118496.2-201ENST00000448300 230 ntBASIC2.57□□□□□ -2
PHTF1Q9UMS5 RNU1-131P-201ENST00000458943 161 ntBASIC2.57□□□□□ -2
PHTF1Q9UMS5 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.57□□□□□ -2
PHTF1Q9UMS5 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.57□□□□□ -2
PHTF1Q9UMS5 AC091925.1-201ENST00000623204 462 ntBASIC2.57□□□□□ -2
PHTF1Q9UMS5 AL078596.1-201ENST00000624856 447 ntBASIC2.57□□□□□ -2
PHTF1Q9UMS5 AC008873.1-201ENST00000625051 138 ntBASIC2.57□□□□□ -2
PHTF1Q9UMS5 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.57□□□□□ -2
PHTF1Q9UMS5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
PHTF1Q9UMS5 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
PHTF1Q9UMS5 LINC02555-201ENST00000563933 1951 ntBASIC2.56□□□□□ -2
PHTF1Q9UMS5 RNU1-58P-201ENST00000362413 163 ntBASIC2.56□□□□□ -2
PHTF1Q9UMS5 Y_RNA.28-201ENST00000362554 111 ntBASIC2.56□□□□□ -2
PHTF1Q9UMS5 RNU6-1305P-201ENST00000364353 104 ntBASIC2.56□□□□□ -2
PHTF1Q9UMS5 Y_RNA.358-201ENST00000365491 99 ntBASIC2.56□□□□□ -2
PHTF1Q9UMS5 Y_RNA.428-201ENST00000384078 102 ntBASIC2.56□□□□□ -2
PHTF1Q9UMS5 RNU1-138P-201ENST00000384093 164 ntBASIC2.56□□□□□ -2
PHTF1Q9UMS5 RNU6-281P-201ENST00000384212 103 ntBASIC2.56□□□□□ -2
PHTF1Q9UMS5 RNU6-482P-201ENST00000391068 107 ntBASIC2.56□□□□□ -2
PHTF1Q9UMS5 AL033519.2-201ENST00000403958 392 ntBASIC2.56□□□□□ -2
PHTF1Q9UMS5 AC004866.1-201ENST00000411748 78 ntBASIC2.56□□□□□ -2
PHTF1Q9UMS5 EIF1P2-201ENST00000428233 350 ntBASIC2.56□□□□□ -2
PHTF1Q9UMS5 snoU13.23-201ENST00000458863 104 ntBASIC2.56□□□□□ -2
PHTF1Q9UMS5 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.56□□□□□ -2
PHTF1Q9UMS5 RNU6-699P-201ENST00000517081 110 ntBASIC2.56□□□□□ -2
PHTF1Q9UMS5 AC093023.1-201ENST00000547375 507 ntBASIC2.56□□□□□ -2
PHTF1Q9UMS5 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.56□□□□□ -2
PHTF1Q9UMS5 SNORD53-201ENST00000579969 78 ntBASIC2.56□□□□□ -2
PHTF1Q9UMS5 MIR6817-201ENST00000615588 66 ntBASIC2.56□□□□□ -2
PHTF1Q9UMS5 AC068205.3-201ENST00000636385 468 ntBASIC2.56□□□□□ -2
PHTF1Q9UMS5 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.56□□□□□ -2
PHTF1Q9UMS5 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
PHTF1Q9UMS5 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.56□□□□□ -2
PHTF1Q9UMS5 AC009487.4-201ENST00000624969 3585 ntBASIC2.56□□□□□ -2
PHTF1Q9UMS5 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.55□□□□□ -2
PHTF1Q9UMS5 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.55□□□□□ -2
PHTF1Q9UMS5 RNU6-874P-201ENST00000362390 105 ntBASIC2.55□□□□□ -2
PHTF1Q9UMS5 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.55□□□□□ -2
PHTF1Q9UMS5 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC2.55□□□□□ -2
PHTF1Q9UMS5 AL445305.1-201ENST00000432577 575 ntBASIC2.55□□□□□ -2
PHTF1Q9UMS5 AL357134.1-201ENST00000445848 426 ntBASIC2.55□□□□□ -2
PHTF1Q9UMS5 snoU13.15-201ENST00000459407 104 ntBASIC2.55□□□□□ -2
PHTF1Q9UMS5 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.55□□□□□ -2
PHTF1Q9UMS5 RNU6-948P-201ENST00000516374 107 ntBASIC2.55□□□□□ -2
PHTF1Q9UMS5 Y_RNA.683-201ENST00000516508 93 ntBASIC2.55□□□□□ -2
PHTF1Q9UMS5 RNU1-117P-201ENST00000517041 158 ntBASIC2.55□□□□□ -2
PHTF1Q9UMS5 AC007229.1-201ENST00000590455 412 ntBASIC2.55□□□□□ -2
PHTF1Q9UMS5 U4.3-201ENST00000621047 82 ntBASIC2.55□□□□□ -2
PHTF1Q9UMS5 AC012640.5-201ENST00000623897 319 ntBASIC2.55□□□□□ -2
PHTF1Q9UMS5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.54□□□□□ -2
PHTF1Q9UMS5 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.54□□□□□ -2
PHTF1Q9UMS5 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.54□□□□□ -2
PHTF1Q9UMS5 RNU6-1164P-201ENST00000364428 107 ntBASIC2.54□□□□□ -2
PHTF1Q9UMS5 Y_RNA.314-201ENST00000365114 102 ntBASIC2.54□□□□□ -2
PHTF1Q9UMS5 SNORA22B-201ENST00000383876 138 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 177 ms