Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC016907.1-201ENST00000419483 435 ntBASIC1.26□□□□□ -2.21
CDH9Q9ULB4 TIMM9P3-201ENST00000428659 274 ntBASIC1.26□□□□□ -2.21
CDH9Q9ULB4 DLGAP5P1-201ENST00000430307 464 ntBASIC1.26□□□□□ -2.21
CDH9Q9ULB4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.26□□□□□ -2.21
CDH9Q9ULB4 AC015922.2-201ENST00000435593 184 ntBASIC1.26□□□□□ -2.21
CDH9Q9ULB4 AC073910.1-201ENST00000445047 438 ntBASIC1.26□□□□□ -2.21
CDH9Q9ULB4 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.26□□□□□ -2.21
CDH9Q9ULB4 AC091885.1-201ENST00000506658 268 ntBASIC1.26□□□□□ -2.21
CDH9Q9ULB4 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
CDH9Q9ULB4 AC024909.2-201ENST00000553035 286 ntBASIC1.26□□□□□ -2.21
CDH9Q9ULB4 RMST_3.1-201ENST00000611651 109 ntBASIC1.26□□□□□ -2.21
CDH9Q9ULB4 AL359880.1-201ENST00000621879 266 ntBASIC1.26□□□□□ -2.21
CDH9Q9ULB4 AC124864.2-201ENST00000624736 186 ntBASIC1.26□□□□□ -2.21
CDH9Q9ULB4 snoU2-30.2-201ENST00000362805 70 ntBASIC1.25□□□□□ -2.21
CDH9Q9ULB4 RNU6-331P-201ENST00000384724 107 ntBASIC1.25□□□□□ -2.21
CDH9Q9ULB4 MIR514A2-201ENST00000385131 88 ntBASIC1.25□□□□□ -2.21
CDH9Q9ULB4 MIR514A3-201ENST00000385132 88 ntBASIC1.25□□□□□ -2.21
CDH9Q9ULB4 COX6CP10-201ENST00000416832 224 ntBASIC1.25□□□□□ -2.21
CDH9Q9ULB4 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.25□□□□□ -2.21
CDH9Q9ULB4 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.25□□□□□ -2.21
CDH9Q9ULB4 MTCO3P8-201ENST00000453691 755 ntBASIC1.25□□□□□ -2.21
CDH9Q9ULB4 AC007215.1-201ENST00000464893 276 ntBASIC1.25□□□□□ -2.21
CDH9Q9ULB4 AC019288.1-201ENST00000557918 224 ntBASIC1.25□□□□□ -2.21
CDH9Q9ULB4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.25□□□□□ -2.21
CDH9Q9ULB4 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.25□□□□□ -2.21
CDH9Q9ULB4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.25□□□□□ -2.21
CDH9Q9ULB4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.25□□□□□ -2.21
CDH9Q9ULB4 AC091895.1-201ENST00000624494 256 ntBASIC1.25□□□□□ -2.21
CDH9Q9ULB4 OR5AK4P-201ENST00000635912 903 ntBASIC1.25□□□□□ -2.21
CDH9Q9ULB4 MIR6863-201ENST00000636112 90 ntBASIC1.25□□□□□ -2.21
CDH9Q9ULB4 MTND4P5-201ENST00000435821 1374 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 RNU6-1322P-201ENST00000364309 107 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 RNU6-522P-201ENST00000364497 107 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 SNORA69-201ENST00000383895 132 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 RNU6-214P-201ENST00000384130 107 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 MIR515-2-201ENST00000384883 83 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 MIR515-1-201ENST00000384884 83 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 MIR549A-201ENST00000385268 96 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 MTCO3P40-201ENST00000392516 676 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 RNU6-325P-201ENST00000411132 105 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 AC004866.1-201ENST00000411748 78 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 EIF1P1-201ENST00000421436 341 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 AL589823.1-201ENST00000429577 183 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 MRPS10P2-201ENST00000431226 381 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.24□□□□□ -2.21
CDH9Q9ULB4 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.24□□□□□ -2.21
CDH9Q9ULB4 RNU6-1208P-201ENST00000459588 107 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 RPL31P58-201ENST00000469001 379 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 RPL30P7-201ENST00000479312 323 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.24□□□□□ -2.21
CDH9Q9ULB4 HMGN1P7-201ENST00000491722 313 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 AF186996.7-201ENST00000492781 209 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 AC093852.1-201ENST00000503587 266 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 AC092436.3-201ENST00000511788 257 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 RNU6-1146P-201ENST00000516282 102 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
CDH9Q9ULB4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.24□□□□□ -2.21
CDH9Q9ULB4 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.24□□□□□ -2.21
CDH9Q9ULB4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.24□□□□□ -2.21
CDH9Q9ULB4 NDUFAF4P1-201ENST00000559425 519 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 SNRPGP20-201ENST00000604477 205 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 AC092807.2-201ENST00000609367 243 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 MIR8076-201ENST00000611401 83 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 AC091812.1-201ENST00000432235 1948 ntBASIC1.24□□□□□ -2.21
CDH9Q9ULB4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
CDH9Q9ULB4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.23□□□□□ -2.21
CDH9Q9ULB4 RNU4-40P-201ENST00000364351 143 ntBASIC1.23□□□□□ -2.21
CDH9Q9ULB4 RNU6-534P-201ENST00000364877 106 ntBASIC1.23□□□□□ -2.21
CDH9Q9ULB4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.23□□□□□ -2.21
CDH9Q9ULB4 RNU6-939P-201ENST00000384634 107 ntBASIC1.23□□□□□ -2.21
CDH9Q9ULB4 Y_RNA.559-201ENST00000384686 107 ntBASIC1.23□□□□□ -2.21
CDH9Q9ULB4 MIR586-201ENST00000385035 97 ntBASIC1.23□□□□□ -2.21
CDH9Q9ULB4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
CDH9Q9ULB4 RNU6-908P-201ENST00000410160 94 ntBASIC1.23□□□□□ -2.21
CDH9Q9ULB4 HMGN2P34-201ENST00000437647 269 ntBASIC1.23□□□□□ -2.21
CDH9Q9ULB4 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC1.23□□□□□ -2.21
CDH9Q9ULB4 AC074290.1-201ENST00000448883 135 ntBASIC1.23□□□□□ -2.21
CDH9Q9ULB4 SRRM1P2-201ENST00000464531 1192 ntBASIC1.23□□□□□ -2.21
CDH9Q9ULB4 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.23□□□□□ -2.21
CDH9Q9ULB4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.23□□□□□ -2.21
CDH9Q9ULB4 Y_RNA.676-201ENST00000516393 96 ntBASIC1.23□□□□□ -2.21
CDH9Q9ULB4 Y_RNA.693-201ENST00000516641 110 ntBASIC1.23□□□□□ -2.21
CDH9Q9ULB4 AC090821.2-201ENST00000523552 176 ntBASIC1.23□□□□□ -2.21
CDH9Q9ULB4 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.23□□□□□ -2.21
CDH9Q9ULB4 MIR4709-201ENST00000577272 72 ntBASIC1.23□□□□□ -2.21
CDH9Q9ULB4 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.23□□□□□ -2.21
CDH9Q9ULB4 CPDP1-201ENST00000579660 283 ntBASIC1.23□□□□□ -2.21
CDH9Q9ULB4 AL158209.2-201ENST00000619266 216 ntBASIC1.23□□□□□ -2.21
CDH9Q9ULB4 SNORA33-201ENST00000363664 130 ntBASIC1.22□□□□□ -2.21
CDH9Q9ULB4 RNU6-1305P-201ENST00000364353 104 ntBASIC1.22□□□□□ -2.21
CDH9Q9ULB4 SNORA25.8-201ENST00000364831 128 ntBASIC1.22□□□□□ -2.21
CDH9Q9ULB4 SNORA4.2-201ENST00000365313 147 ntBASIC1.22□□□□□ -2.21
CDH9Q9ULB4 RNU6-784P-201ENST00000384330 106 ntBASIC1.22□□□□□ -2.21
CDH9Q9ULB4 EIF4E2P1-201ENST00000393781 255 ntBASIC1.22□□□□□ -2.21
CDH9Q9ULB4 MTND3P16-201ENST00000452205 344 ntBASIC1.22□□□□□ -2.21
CDH9Q9ULB4 MTCO1P29-201ENST00000496868 288 ntBASIC1.22□□□□□ -2.21
CDH9Q9ULB4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.22□□□□□ -2.21
CDH9Q9ULB4 RN7SKP179-201ENST00000516126 217 ntBASIC1.22□□□□□ -2.21
CDH9Q9ULB4 RAB11AP2-201ENST00000545905 639 ntBASIC1.22□□□□□ -2.21
CDH9Q9ULB4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms