Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 Y_RNA.393-201ENST00000383936 102 ntBASIC3.52□□□□□ -1.85
FOXD3Q9UJU5 Y_RNA.420-201ENST00000384043 110 ntBASIC3.52□□□□□ -1.85
FOXD3Q9UJU5 RNU1-89P-201ENST00000384592 164 ntBASIC3.52□□□□□ -1.85
FOXD3Q9UJU5 RNU1-101P-201ENST00000391171 127 ntBASIC3.52□□□□□ -1.85
FOXD3Q9UJU5 SNORA79-201ENST00000408376 140 ntBASIC3.52□□□□□ -1.85
FOXD3Q9UJU5 TBCAP1-201ENST00000436520 327 ntBASIC3.52□□□□□ -1.85
FOXD3Q9UJU5 RNU7-197P-201ENST00000458836 62 ntBASIC3.52□□□□□ -1.85
FOXD3Q9UJU5 AC080013.2-201ENST00000460866 323 ntBASIC3.52□□□□□ -1.85
FOXD3Q9UJU5 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.52□□□□□ -1.85
FOXD3Q9UJU5 RNU6-561P-201ENST00000516222 102 ntBASIC3.52□□□□□ -1.85
FOXD3Q9UJU5 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.52□□□□□ -1.85
FOXD3Q9UJU5 AC023043.3-201ENST00000593113 385 ntBASIC3.52□□□□□ -1.85
FOXD3Q9UJU5 AC039056.2-201ENST00000622261 511 ntBASIC3.52□□□□□ -1.85
FOXD3Q9UJU5 MIR6844-201ENST00000637122 62 ntBASIC3.52□□□□□ -1.85
FOXD3Q9UJU5 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.52□□□□□ -1.85
FOXD3Q9UJU5 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
FOXD3Q9UJU5 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
FOXD3Q9UJU5 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
FOXD3Q9UJU5 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
FOXD3Q9UJU5 Y_RNA.127-201ENST00000363386 109 ntBASIC3.51□□□□□ -1.85
FOXD3Q9UJU5 RNU6-117P-201ENST00000365415 107 ntBASIC3.51□□□□□ -1.85
FOXD3Q9UJU5 RNU6-546P-201ENST00000383991 107 ntBASIC3.51□□□□□ -1.85
FOXD3Q9UJU5 Y_RNA.521-201ENST00000384560 114 ntBASIC3.51□□□□□ -1.85
FOXD3Q9UJU5 RN7SKP156-201ENST00000410308 342 ntBASIC3.51□□□□□ -1.85
FOXD3Q9UJU5 RNU6-1328P-201ENST00000410938 106 ntBASIC3.51□□□□□ -1.85
FOXD3Q9UJU5 RNU2-55P-201ENST00000411146 174 ntBASIC3.51□□□□□ -1.85
FOXD3Q9UJU5 AL353705.1-201ENST00000433468 480 ntBASIC3.51□□□□□ -1.85
FOXD3Q9UJU5 AL500522.2-201ENST00000448562 343 ntBASIC3.51□□□□□ -1.85
FOXD3Q9UJU5 CYP2C59P-201ENST00000457790 269 ntBASIC3.51□□□□□ -1.85
FOXD3Q9UJU5 RN7SL323P-201ENST00000494712 295 ntBASIC3.51□□□□□ -1.85
FOXD3Q9UJU5 RNA5SP164-201ENST00000516533 110 ntBASIC3.51□□□□□ -1.85
FOXD3Q9UJU5 AC090115.4-201ENST00000609970 188 ntBASIC3.51□□□□□ -1.85
FOXD3Q9UJU5 AC013412.1-201ENST00000610687 192 ntBASIC3.51□□□□□ -1.85
FOXD3Q9UJU5 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.51□□□□□ -1.85
FOXD3Q9UJU5 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
FOXD3Q9UJU5 MIR7515-201ENST00000637837 67 ntBASIC3.51□□□□□ -1.85
FOXD3Q9UJU5 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
FOXD3Q9UJU5 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
FOXD3Q9UJU5 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
FOXD3Q9UJU5 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
FOXD3Q9UJU5 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
FOXD3Q9UJU5 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.5□□□□□ -1.85
FOXD3Q9UJU5 AC080128.1-201ENST00000474389 1917 ntBASIC3.5□□□□□ -1.85
FOXD3Q9UJU5 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
FOXD3Q9UJU5 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
FOXD3Q9UJU5 RNU4-13P-201ENST00000364019 141 ntBASIC3.5□□□□□ -1.85
FOXD3Q9UJU5 CD24P4-201ENST00000382840 243 ntBASIC3.5□□□□□ -1.85
FOXD3Q9UJU5 RNU6-418P-201ENST00000384035 107 ntBASIC3.5□□□□□ -1.85
FOXD3Q9UJU5 RNU6-768P-201ENST00000384683 107 ntBASIC3.5□□□□□ -1.85
FOXD3Q9UJU5 MIR95-201ENST00000385072 81 ntBASIC3.5□□□□□ -1.85
FOXD3Q9UJU5 SNORA75.5-201ENST00000391291 81 ntBASIC3.5□□□□□ -1.85
FOXD3Q9UJU5 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
FOXD3Q9UJU5 ARF4P2-201ENST00000430209 526 ntBASIC3.5□□□□□ -1.85
FOXD3Q9UJU5 AL357134.1-201ENST00000445848 426 ntBASIC3.5□□□□□ -1.85
FOXD3Q9UJU5 HMGN2P18-201ENST00000450680 270 ntBASIC3.5□□□□□ -1.85
FOXD3Q9UJU5 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.5□□□□□ -1.85
FOXD3Q9UJU5 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.5□□□□□ -1.85
FOXD3Q9UJU5 RNU6-971P-201ENST00000516920 106 ntBASIC3.5□□□□□ -1.85
FOXD3Q9UJU5 RNA5SP490-201ENST00000517141 136 ntBASIC3.5□□□□□ -1.85
FOXD3Q9UJU5 MIR3199-1-201ENST00000582434 88 ntBASIC3.5□□□□□ -1.85
FOXD3Q9UJU5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.5□□□□□ -1.85
FOXD3Q9UJU5 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
FOXD3Q9UJU5 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
FOXD3Q9UJU5 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
FOXD3Q9UJU5 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
FOXD3Q9UJU5 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
FOXD3Q9UJU5 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 Y_RNA.81-201ENST00000362997 102 ntBASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 SNORD45.3-201ENST00000363836 72 ntBASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 SNORA68.1-201ENST00000364537 132 ntBASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 SNORD116-14-201ENST00000383894 92 ntBASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 SNORD116-17-201ENST00000383929 92 ntBASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 SNORA72-201ENST00000384339 132 ntBASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 SNORD116-15-201ENST00000384445 92 ntBASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 SNORD116-19-201ENST00000384729 92 ntBASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 AL139247.1-201ENST00000422768 325 ntBASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 snoU13.22-201ENST00000459428 104 ntBASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 RPL27AP5-201ENST00000469428 449 ntBASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 RN7SL330P-201ENST00000469709 307 ntBASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 RNA5SP179-201ENST00000517284 121 ntBASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 AC107934.2-201ENST00000518653 310 ntBASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 AC027419.1-201ENST00000522976 328 ntBASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 AC015720.1-201ENST00000565251 277 ntBASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 AC091167.4-201ENST00000605079 184 ntBASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 AL021707.8-201ENST00000609428 183 ntBASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 AP001340.1-201ENST00000624405 217 ntBASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 MIR1248-201ENST00000629190 106 ntBASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 AC012442.3-202ENST00000636742 206 ntBASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 AC093908.1-201ENST00000623125 8092 ntBASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
FOXD3Q9UJU5 IPO8P1-201ENST00000455509 3109 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms