Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 SNORA38-201ENST00000363946 132 ntBASIC3.02□□□□□ -1.93
USP25Q9UHP3 RNU6-879P-201ENST00000364328 108 ntBASIC3.02□□□□□ -1.93
USP25Q9UHP3 SNORD63-201ENST00000384262 68 ntBASIC3.02□□□□□ -1.93
USP25Q9UHP3 RNU6-1072P-201ENST00000384703 107 ntBASIC3.02□□□□□ -1.93
USP25Q9UHP3 RNU6-443P-201ENST00000384780 107 ntBASIC3.02□□□□□ -1.93
USP25Q9UHP3 MIR95-201ENST00000385072 81 ntBASIC3.02□□□□□ -1.93
USP25Q9UHP3 AC012306.1-201ENST00000423267 114 ntBASIC3.02□□□□□ -1.93
USP25Q9UHP3 CR769767.1-201ENST00000436337 346 ntBASIC3.02□□□□□ -1.93
USP25Q9UHP3 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.02□□□□□ -1.93
USP25Q9UHP3 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.02□□□□□ -1.93
USP25Q9UHP3 AC098869.1-201ENST00000481627 292 ntBASIC3.02□□□□□ -1.93
USP25Q9UHP3 RNU6-567P-201ENST00000516746 107 ntBASIC3.02□□□□□ -1.93
USP25Q9UHP3 MIR3128-201ENST00000581957 66 ntBASIC3.02□□□□□ -1.93
USP25Q9UHP3 AL034555.1-201ENST00000604816 211 ntBASIC3.02□□□□□ -1.93
USP25Q9UHP3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.02□□□□□ -1.93
USP25Q9UHP3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
USP25Q9UHP3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.01□□□□□ -1.93
USP25Q9UHP3 snoU2_19.1-201ENST00000362361 80 ntBASIC3.01□□□□□ -1.93
USP25Q9UHP3 Y_RNA.60-201ENST00000362831 98 ntBASIC3.01□□□□□ -1.93
USP25Q9UHP3 RNU6-1159P-201ENST00000362933 107 ntBASIC3.01□□□□□ -1.93
USP25Q9UHP3 Y_RNA.143-201ENST00000363520 106 ntBASIC3.01□□□□□ -1.93
USP25Q9UHP3 SNORA18.3-201ENST00000384122 132 ntBASIC3.01□□□□□ -1.93
USP25Q9UHP3 RNU6-281P-201ENST00000384212 103 ntBASIC3.01□□□□□ -1.93
USP25Q9UHP3 SNORA44-201ENST00000384584 132 ntBASIC3.01□□□□□ -1.93
USP25Q9UHP3 RNU6-541P-201ENST00000384709 110 ntBASIC3.01□□□□□ -1.93
USP25Q9UHP3 MIR9-1-201ENST00000385198 89 ntBASIC3.01□□□□□ -1.93
USP25Q9UHP3 Y_RNA.581-201ENST00000391017 97 ntBASIC3.01□□□□□ -1.93
USP25Q9UHP3 RNA5SP181-201ENST00000410246 98 ntBASIC3.01□□□□□ -1.93
USP25Q9UHP3 SUMO1P4-201ENST00000429430 302 ntBASIC3.01□□□□□ -1.93
USP25Q9UHP3 AC087499.2-201ENST00000432861 149 ntBASIC3.01□□□□□ -1.93
USP25Q9UHP3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.01□□□□□ -1.93
USP25Q9UHP3 AC107222.1-201ENST00000510899 637 ntBASIC3.01□□□□□ -1.93
USP25Q9UHP3 RPL23AP94-201ENST00000512518 302 ntBASIC3.01□□□□□ -1.93
USP25Q9UHP3 SNORA31.15-201ENST00000516771 132 ntBASIC3.01□□□□□ -1.93
USP25Q9UHP3 RNA5SP54-201ENST00000516951 92 ntBASIC3.01□□□□□ -1.93
USP25Q9UHP3 AC012433.1-201ENST00000588916 398 ntBASIC3.01□□□□□ -1.93
USP25Q9UHP3 AL442067.1-201ENST00000613261 223 ntBASIC3.01□□□□□ -1.93
USP25Q9UHP3 AC141273.2-201ENST00000618989 130 ntBASIC3.01□□□□□ -1.93
USP25Q9UHP3 MTND5P6-201ENST00000422338 1798 ntBASIC3□□□□□ -1.93
USP25Q9UHP3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3□□□□□ -1.93
USP25Q9UHP3 RNA5SP361-201ENST00000362686 118 ntBASIC3□□□□□ -1.93
USP25Q9UHP3 Y_RNA.462-201ENST00000384268 102 ntBASIC3□□□□□ -1.93
USP25Q9UHP3 MIR215-201ENST00000384858 110 ntBASIC3□□□□□ -1.93
USP25Q9UHP3 MIR487A-201ENST00000385009 80 ntBASIC3□□□□□ -1.93
USP25Q9UHP3 MT-TR-201ENST00000387439 65 ntBASIC3□□□□□ -1.93
USP25Q9UHP3 MIR548H3-201ENST00000408771 118 ntBASIC3□□□□□ -1.93
USP25Q9UHP3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3□□□□□ -1.93
USP25Q9UHP3 RPS12P2-201ENST00000439728 269 ntBASIC3□□□□□ -1.93
USP25Q9UHP3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3□□□□□ -1.93
USP25Q9UHP3 Z98949.2-201ENST00000440996 144 ntBASIC3□□□□□ -1.93
USP25Q9UHP3 AL135938.1-201ENST00000443141 297 ntBASIC3□□□□□ -1.93
USP25Q9UHP3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3□□□□□ -1.93
USP25Q9UHP3 MTND4LP30-201ENST00000454092 297 ntBASIC3□□□□□ -1.93
USP25Q9UHP3 SNORA31.16-201ENST00000516773 139 ntBASIC3□□□□□ -1.93
USP25Q9UHP3 SNORA48.11-201ENST00000517015 89 ntBASIC3□□□□□ -1.93
USP25Q9UHP3 UBL5P4-201ENST00000562584 236 ntBASIC3□□□□□ -1.93
USP25Q9UHP3 MIR4446-201ENST00000578505 67 ntBASIC3□□□□□ -1.93
USP25Q9UHP3 MIR5194-201ENST00000582634 120 ntBASIC3□□□□□ -1.93
USP25Q9UHP3 AC005520.5-201ENST00000613926 164 ntBASIC3□□□□□ -1.93
USP25Q9UHP3 AC011476.5-201ENST00000615594 130 ntBASIC3□□□□□ -1.93
USP25Q9UHP3 AC005296.1-201ENST00000616145 209 ntBASIC3□□□□□ -1.93
USP25Q9UHP3 U4atac.1-201ENST00000618345 95 ntBASIC3□□□□□ -1.93
USP25Q9UHP3 AC078938.1-201ENST00000620993 318 ntBASIC3□□□□□ -1.93
USP25Q9UHP3 FO624990.1-201ENST00000636373 85 ntBASIC3□□□□□ -1.93
USP25Q9UHP3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
USP25Q9UHP3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
USP25Q9UHP3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3□□□□□ -1.93
USP25Q9UHP3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3□□□□□ -1.93
USP25Q9UHP3 ZNF271P-202ENST00000465539 1970 ntBASIC3□□□□□ -1.93
USP25Q9UHP3 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
USP25Q9UHP3 Y_RNA.20-201ENST00000362479 113 ntBASIC2.99□□□□□ -1.93
USP25Q9UHP3 RNU6-1145P-201ENST00000384246 107 ntBASIC2.99□□□□□ -1.93
USP25Q9UHP3 MIR329-1-201ENST00000385028 80 ntBASIC2.99□□□□□ -1.93
USP25Q9UHP3 SNORD12B-201ENST00000410433 91 ntBASIC2.99□□□□□ -1.93
USP25Q9UHP3 RNU6-1001P-201ENST00000411265 100 ntBASIC2.99□□□□□ -1.93
USP25Q9UHP3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.99□□□□□ -1.93
USP25Q9UHP3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.99□□□□□ -1.93
USP25Q9UHP3 snoU13.6-201ENST00000458785 104 ntBASIC2.99□□□□□ -1.93
USP25Q9UHP3 AC007215.1-201ENST00000464893 276 ntBASIC2.99□□□□□ -1.93
USP25Q9UHP3 RPL26P26-201ENST00000480251 434 ntBASIC2.99□□□□□ -1.93
USP25Q9UHP3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.99□□□□□ -1.93
USP25Q9UHP3 MIR5695-201ENST00000579717 85 ntBASIC2.99□□□□□ -1.93
USP25Q9UHP3 MIR4423-201ENST00000580922 80 ntBASIC2.99□□□□□ -1.93
USP25Q9UHP3 MIR4635-201ENST00000583759 79 ntBASIC2.99□□□□□ -1.93
USP25Q9UHP3 AL137847.3-201ENST00000611521 109 ntBASIC2.99□□□□□ -1.93
USP25Q9UHP3 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
USP25Q9UHP3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
USP25Q9UHP3 AC069528.2-201ENST00000624849 1991 ntBASIC2.98□□□□□ -1.93
USP25Q9UHP3 RNU5F-3P-201ENST00000363767 117 ntBASIC2.98□□□□□ -1.93
USP25Q9UHP3 SNORA80A-201ENST00000363922 136 ntBASIC2.98□□□□□ -1.93
USP25Q9UHP3 RNU6-280P-201ENST00000364145 104 ntBASIC2.98□□□□□ -1.93
USP25Q9UHP3 RNU1-112P-201ENST00000364401 164 ntBASIC2.98□□□□□ -1.93
USP25Q9UHP3 SNORA20.1-201ENST00000364790 130 ntBASIC2.98□□□□□ -1.93
USP25Q9UHP3 Y_RNA.416-201ENST00000384014 113 ntBASIC2.98□□□□□ -1.93
USP25Q9UHP3 MIR561-201ENST00000385216 97 ntBASIC2.98□□□□□ -1.93
USP25Q9UHP3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
USP25Q9UHP3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.98□□□□□ -1.93
USP25Q9UHP3 WARS2P1-201ENST00000429678 537 ntBASIC2.98□□□□□ -1.93
USP25Q9UHP3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.98□□□□□ -1.93
USP25Q9UHP3 RNU6-496P-201ENST00000516145 99 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms