Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AL034555.1-201ENST00000604816 211 ntBASIC2.82□□□□□ -1.96
DKK3Q9UBP4 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.82□□□□□ -1.96
DKK3Q9UBP4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.82□□□□□ -1.96
DKK3Q9UBP4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.82□□□□□ -1.96
DKK3Q9UBP4 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
DKK3Q9UBP4 AC092593.1-201ENST00000515413 1815 ntBASIC2.82□□□□□ -1.96
DKK3Q9UBP4 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.81□□□□□ -1.96
DKK3Q9UBP4 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.81□□□□□ -1.96
DKK3Q9UBP4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.81□□□□□ -1.96
DKK3Q9UBP4 SNORA68.1-201ENST00000364537 132 ntBASIC2.81□□□□□ -1.96
DKK3Q9UBP4 SNORA70B-201ENST00000384210 135 ntBASIC2.81□□□□□ -1.96
DKK3Q9UBP4 MIR9-1-201ENST00000385198 89 ntBASIC2.81□□□□□ -1.96
DKK3Q9UBP4 RNU6-1001P-201ENST00000411265 100 ntBASIC2.81□□□□□ -1.96
DKK3Q9UBP4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.81□□□□□ -1.96
DKK3Q9UBP4 AC104389.3-201ENST00000445629 235 ntBASIC2.81□□□□□ -1.96
DKK3Q9UBP4 AC007395.1-201ENST00000451333 677 ntBASIC2.81□□□□□ -1.96
DKK3Q9UBP4 RNU7-26P-201ENST00000458980 63 ntBASIC2.81□□□□□ -1.96
DKK3Q9UBP4 AP001324.2-201ENST00000461163 319 ntBASIC2.81□□□□□ -1.96
DKK3Q9UBP4 AP004217.1-201ENST00000480579 346 ntBASIC2.81□□□□□ -1.96
DKK3Q9UBP4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.81□□□□□ -1.96
DKK3Q9UBP4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.81□□□□□ -1.96
DKK3Q9UBP4 Y_RNA.676-201ENST00000516393 96 ntBASIC2.81□□□□□ -1.96
DKK3Q9UBP4 AK6P2-201ENST00000549020 471 ntBASIC2.81□□□□□ -1.96
DKK3Q9UBP4 MIR4658-201ENST00000584344 65 ntBASIC2.81□□□□□ -1.96
DKK3Q9UBP4 AC012433.1-201ENST00000588916 398 ntBASIC2.81□□□□□ -1.96
DKK3Q9UBP4 AC011476.5-201ENST00000615594 130 ntBASIC2.81□□□□□ -1.96
DKK3Q9UBP4 AC141273.2-201ENST00000618989 130 ntBASIC2.81□□□□□ -1.96
DKK3Q9UBP4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.81□□□□□ -1.96
DKK3Q9UBP4 AL109809.4-201ENST00000603520 2185 ntBASIC2.81□□□□□ -1.96
DKK3Q9UBP4 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.81□□□□□ -1.96
DKK3Q9UBP4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.81□□□□□ -1.96
DKK3Q9UBP4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
DKK3Q9UBP4 MIR26A1-201ENST00000362205 77 ntBASIC2.8□□□□□ -1.96
DKK3Q9UBP4 RNU6-937P-201ENST00000384325 106 ntBASIC2.8□□□□□ -1.96
DKK3Q9UBP4 RNU6-1072P-201ENST00000384703 107 ntBASIC2.8□□□□□ -1.96
DKK3Q9UBP4 RNU6-443P-201ENST00000384780 107 ntBASIC2.8□□□□□ -1.96
DKK3Q9UBP4 MIR181B1-201ENST00000385240 110 ntBASIC2.8□□□□□ -1.96
DKK3Q9UBP4 CBX3P9-201ENST00000402326 552 ntBASIC2.8□□□□□ -1.96
DKK3Q9UBP4 AL138827.1-201ENST00000402666 306 ntBASIC2.8□□□□□ -1.96
DKK3Q9UBP4 MIR548H3-201ENST00000408771 118 ntBASIC2.8□□□□□ -1.96
DKK3Q9UBP4 RNA5SP201-201ENST00000410316 124 ntBASIC2.8□□□□□ -1.96
DKK3Q9UBP4 RNA5SP21-201ENST00000410917 96 ntBASIC2.8□□□□□ -1.96
DKK3Q9UBP4 RNU5A-5P-201ENST00000411054 116 ntBASIC2.8□□□□□ -1.96
DKK3Q9UBP4 AL451074.5-201ENST00000415894 435 ntBASIC2.8□□□□□ -1.96
DKK3Q9UBP4 AC005002.2-201ENST00000438228 269 ntBASIC2.8□□□□□ -1.96
DKK3Q9UBP4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.8□□□□□ -1.96
DKK3Q9UBP4 RN7SKP132-201ENST00000516001 208 ntBASIC2.8□□□□□ -1.96
DKK3Q9UBP4 RNU6-496P-201ENST00000516145 99 ntBASIC2.8□□□□□ -1.96
DKK3Q9UBP4 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.8□□□□□ -1.96
DKK3Q9UBP4 AC073410.2-201ENST00000603240 332 ntBASIC2.8□□□□□ -1.96
DKK3Q9UBP4 AC010999.1-201ENST00000611856 324 ntBASIC2.8□□□□□ -1.96
DKK3Q9UBP4 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.8□□□□□ -1.96
DKK3Q9UBP4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
DKK3Q9UBP4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
DKK3Q9UBP4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.8□□□□□ -1.96
DKK3Q9UBP4 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.8□□□□□ -1.96
DKK3Q9UBP4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
DKK3Q9UBP4 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.8□□□□□ -1.96
DKK3Q9UBP4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
DKK3Q9UBP4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
DKK3Q9UBP4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.79□□□□□ -1.96
DKK3Q9UBP4 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
DKK3Q9UBP4 AL391987.6-201ENST00000305671 199 ntBASIC2.79□□□□□ -1.96
DKK3Q9UBP4 Y_RNA.20-201ENST00000362479 113 ntBASIC2.79□□□□□ -1.96
DKK3Q9UBP4 RNU6-1210P-201ENST00000363775 107 ntBASIC2.79□□□□□ -1.96
DKK3Q9UBP4 RNU6-873P-201ENST00000363833 107 ntBASIC2.79□□□□□ -1.96
DKK3Q9UBP4 SNORA20.1-201ENST00000364790 130 ntBASIC2.79□□□□□ -1.96
DKK3Q9UBP4 Y_RNA.416-201ENST00000384014 113 ntBASIC2.79□□□□□ -1.96
DKK3Q9UBP4 RNU6-1026P-201ENST00000384465 108 ntBASIC2.79□□□□□ -1.96
DKK3Q9UBP4 RNU1-57P-201ENST00000384491 166 ntBASIC2.79□□□□□ -1.96
DKK3Q9UBP4 MIR186-201ENST00000384988 86 ntBASIC2.79□□□□□ -1.96
DKK3Q9UBP4 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.79□□□□□ -1.96
DKK3Q9UBP4 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.79□□□□□ -1.96
DKK3Q9UBP4 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.79□□□□□ -1.96
DKK3Q9UBP4 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.79□□□□□ -1.96
DKK3Q9UBP4 MTND4LP30-201ENST00000454092 297 ntBASIC2.79□□□□□ -1.96
DKK3Q9UBP4 RPS3P1-201ENST00000456781 192 ntBASIC2.79□□□□□ -1.96
DKK3Q9UBP4 HMGB3P3-201ENST00000510526 400 ntBASIC2.79□□□□□ -1.96
DKK3Q9UBP4 AC079600.2-201ENST00000550076 130 ntBASIC2.79□□□□□ -1.96
DKK3Q9UBP4 MIR4319-201ENST00000577285 85 ntBASIC2.79□□□□□ -1.96
DKK3Q9UBP4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.79□□□□□ -1.96
DKK3Q9UBP4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.79□□□□□ -1.96
DKK3Q9UBP4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
DKK3Q9UBP4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.79□□□□□ -1.96
DKK3Q9UBP4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.78□□□□□ -1.96
DKK3Q9UBP4 ZNF658B-202ENST00000615961 3375 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
DKK3Q9UBP4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.78□□□□□ -1.96
DKK3Q9UBP4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
DKK3Q9UBP4 RNU1-62P-201ENST00000362599 164 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 RNU4-15P-201ENST00000362613 141 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 SNORD113-8-201ENST00000363497 74 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 SNORA38-201ENST00000363946 132 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 Y_RNA.230-201ENST00000364348 109 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 Y_RNA.237-201ENST00000364439 102 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 RNU6-926P-201ENST00000384075 107 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 SNORD58.1-201ENST00000391313 66 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 MIR208B-201ENST00000401172 77 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 MIR320B2-201ENST00000408479 138 ntBASIC2.78□□□□□ -1.96
DKK3Q9UBP4 Y_RNA.595-201ENST00000410403 105 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms