Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HCN3Q9P1Z3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HCN3Q9P1Z3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
HCN3Q9P1Z3 RNU1-62P-201ENST00000362599 164 ntBASIC2.23□□□□□ -2.05
HCN3Q9P1Z3 Y_RNA.463-201ENST00000384271 102 ntBASIC2.23□□□□□ -2.05
HCN3Q9P1Z3 RNU6-160P-201ENST00000384591 107 ntBASIC2.23□□□□□ -2.05
HCN3Q9P1Z3 MIR518A2-201ENST00000384966 87 ntBASIC2.23□□□□□ -2.05
HCN3Q9P1Z3 SNORD23.1-201ENST00000408212 104 ntBASIC2.23□□□□□ -2.05
HCN3Q9P1Z3 RNU6-1001P-201ENST00000411265 100 ntBASIC2.23□□□□□ -2.05
HCN3Q9P1Z3 BX510359.4-201ENST00000423750 193 ntBASIC2.23□□□□□ -2.05
HCN3Q9P1Z3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.23□□□□□ -2.05
HCN3Q9P1Z3 AC007395.1-201ENST00000451333 677 ntBASIC2.23□□□□□ -2.05
HCN3Q9P1Z3 AC107222.1-201ENST00000510899 637 ntBASIC2.23□□□□□ -2.05
HCN3Q9P1Z3 RNU1-41P-201ENST00000516161 162 ntBASIC2.23□□□□□ -2.05
HCN3Q9P1Z3 RNU1-48P-201ENST00000516400 162 ntBASIC2.23□□□□□ -2.05
HCN3Q9P1Z3 RNA5SP281-201ENST00000516504 135 ntBASIC2.23□□□□□ -2.05
HCN3Q9P1Z3 SNORD116.3-201ENST00000517176 78 ntBASIC2.23□□□□□ -2.05
HCN3Q9P1Z3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.23□□□□□ -2.05
HCN3Q9P1Z3 AC009127.3-201ENST00000570531 403 ntBASIC2.23□□□□□ -2.05
HCN3Q9P1Z3 MZT1P2-201ENST00000604387 248 ntBASIC2.23□□□□□ -2.05
HCN3Q9P1Z3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.23□□□□□ -2.05
HCN3Q9P1Z3 AC087588.2-201ENST00000617667 426 ntBASIC2.23□□□□□ -2.05
HCN3Q9P1Z3 AC012640.5-201ENST00000623897 319 ntBASIC2.23□□□□□ -2.05
HCN3Q9P1Z3 AL078596.1-201ENST00000624856 447 ntBASIC2.23□□□□□ -2.05
HCN3Q9P1Z3 LINC02555-201ENST00000563933 1951 ntBASIC2.23□□□□□ -2.05
HCN3Q9P1Z3 AC005336.3-201ENST00000623833 2679 ntBASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 RNU6-1164P-201ENST00000364428 107 ntBASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 SNORD87-201ENST00000364849 89 ntBASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 Y_RNA.415-201ENST00000384012 112 ntBASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 Y_RNA.460-201ENST00000384255 102 ntBASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 MIR504-201ENST00000385065 83 ntBASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 SNORA40.19-201ENST00000390846 128 ntBASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 RNU11-3P-201ENST00000391111 133 ntBASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 EIF1P2-201ENST00000428233 350 ntBASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 AC096644.2-201ENST00000429278 159 ntBASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 AC114982.1-201ENST00000469402 321 ntBASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 RNA5SP82-201ENST00000516707 92 ntBASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 SNORA31.25-201ENST00000517242 134 ntBASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 AC091144.1-201ENST00000519573 138 ntBASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 MYL12BP1-201ENST00000569826 507 ntBASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 MIR4529-201ENST00000578110 78 ntBASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 MIR4524B-201ENST00000581569 115 ntBASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 CYP2C61P-201ENST00000604072 290 ntBASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 AC067747.1-201ENST00000608026 250 ntBASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 AL590240.4-201ENST00000616908 390 ntBASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 AL359314.1-201ENST00000616913 261 ntBASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 AL590808.1-201ENST00000618696 141 ntBASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 MTND5P35-201ENST00000557537 1720 ntBASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.22□□□□□ -2.05
HCN3Q9P1Z3 AC006026.1-201ENST00000444025 1803 ntBASIC2.21□□□□□ -2.05
HCN3Q9P1Z3 MIR21-201ENST00000362134 72 ntBASIC2.21□□□□□ -2.06
HCN3Q9P1Z3 MIR369-201ENST00000362155 70 ntBASIC2.21□□□□□ -2.06
HCN3Q9P1Z3 RNU6-23P-201ENST00000363283 107 ntBASIC2.21□□□□□ -2.06
HCN3Q9P1Z3 SNORD114-6-201ENST00000364393 72 ntBASIC2.21□□□□□ -2.06
HCN3Q9P1Z3 Y_RNA.813-201ENST00000364639 102 ntBASIC2.21□□□□□ -2.06
HCN3Q9P1Z3 Y_RNA.535-201ENST00000384612 99 ntBASIC2.21□□□□□ -2.06
HCN3Q9P1Z3 Y_RNA.592-201ENST00000410274 109 ntBASIC2.21□□□□□ -2.06
HCN3Q9P1Z3 RNU4-53P-201ENST00000410828 140 ntBASIC2.21□□□□□ -2.06
HCN3Q9P1Z3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.21□□□□□ -2.06
HCN3Q9P1Z3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.21□□□□□ -2.06
HCN3Q9P1Z3 AC074290.1-201ENST00000448883 135 ntBASIC2.21□□□□□ -2.06
HCN3Q9P1Z3 AC016717.1-201ENST00000448918 286 ntBASIC2.21□□□□□ -2.06
HCN3Q9P1Z3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.21□□□□□ -2.06
HCN3Q9P1Z3 HMGN2P9-201ENST00000476875 229 ntBASIC2.21□□□□□ -2.06
HCN3Q9P1Z3 HMGN1P13-201ENST00000505795 138 ntBASIC2.21□□□□□ -2.06
HCN3Q9P1Z3 Y_RNA.683-201ENST00000516508 93 ntBASIC2.21□□□□□ -2.06
HCN3Q9P1Z3 RNU6-107P-201ENST00000516643 102 ntBASIC2.21□□□□□ -2.06
HCN3Q9P1Z3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.21□□□□□ -2.06
HCN3Q9P1Z3 MIR4769-201ENST00000584126 77 ntBASIC2.21□□□□□ -2.06
HCN3Q9P1Z3 AC125232.2-201ENST00000592457 143 ntBASIC2.21□□□□□ -2.06
HCN3Q9P1Z3 AC090971.5-201ENST00000621102 293 ntBASIC2.21□□□□□ -2.06
HCN3Q9P1Z3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
HCN3Q9P1Z3 AC016717.2-201ENST00000609089 5141 ntBASIC2.2□□□□□ -2.06
HCN3Q9P1Z3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.2□□□□□ -2.06
HCN3Q9P1Z3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
HCN3Q9P1Z3 RNU6-1115P-201ENST00000362490 106 ntBASIC2.2□□□□□ -2.06
HCN3Q9P1Z3 RNA5SP361-201ENST00000362686 118 ntBASIC2.2□□□□□ -2.06
HCN3Q9P1Z3 MIR597-201ENST00000384968 97 ntBASIC2.2□□□□□ -2.06
HCN3Q9P1Z3 MIR586-201ENST00000385035 97 ntBASIC2.2□□□□□ -2.06
HCN3Q9P1Z3 MIR628-201ENST00000385229 95 ntBASIC2.2□□□□□ -2.06
HCN3Q9P1Z3 Y_RNA.595-201ENST00000410403 105 ntBASIC2.2□□□□□ -2.06
HCN3Q9P1Z3 AL135786.1-201ENST00000415892 214 ntBASIC2.2□□□□□ -2.06
HCN3Q9P1Z3 RPS15AP28-201ENST00000435088 386 ntBASIC2.2□□□□□ -2.06
HCN3Q9P1Z3 AC011753.1-201ENST00000451001 220 ntBASIC2.2□□□□□ -2.06
HCN3Q9P1Z3 snoU13.26-201ENST00000459452 105 ntBASIC2.2□□□□□ -2.06
HCN3Q9P1Z3 AC010531.2-201ENST00000465012 153 ntBASIC2.2□□□□□ -2.06
HCN3Q9P1Z3 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.2□□□□□ -2.06
HCN3Q9P1Z3 RNU6-976P-201ENST00000516086 111 ntBASIC2.2□□□□□ -2.06
HCN3Q9P1Z3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC2.2□□□□□ -2.06
HCN3Q9P1Z3 SNORD53-201ENST00000579969 78 ntBASIC2.2□□□□□ -2.06
HCN3Q9P1Z3 AL080274.1-201ENST00000605565 220 ntBASIC2.2□□□□□ -2.06
HCN3Q9P1Z3 AL160413.1-201ENST00000622780 310 ntBASIC2.2□□□□□ -2.06
HCN3Q9P1Z3 AC068205.3-201ENST00000636385 468 ntBASIC2.2□□□□□ -2.06
HCN3Q9P1Z3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
HCN3Q9P1Z3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms