Protein–RNA interactions for Protein: Q9P031

CCDC59, Thyroid transcription factor 1-associated protein 26, humanhuman

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59Q9P031 RNA5SP504-201ENST00000410676 117 ntBASIC0.96□□□□□ -2.26
CCDC59Q9P031 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.96□□□□□ -2.26
CCDC59Q9P031 CYCSP49-201ENST00000420810 319 ntBASIC0.96□□□□□ -2.26
CCDC59Q9P031 AC010424.1-201ENST00000506336 297 ntBASIC0.96□□□□□ -2.26
CCDC59Q9P031 AC103851.1-201ENST00000506833 274 ntBASIC0.96□□□□□ -2.26
CCDC59Q9P031 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.96□□□□□ -2.26
CCDC59Q9P031 AC006362.1-201ENST00000567392 174 ntBASIC0.96□□□□□ -2.26
CCDC59Q9P031 AC023043.2-201ENST00000589678 1026 ntBASIC0.96□□□□□ -2.26
CCDC59Q9P031 HSPE1P19-201ENST00000603327 295 ntBASIC0.96□□□□□ -2.26
CCDC59Q9P031 AC073413.2-201ENST00000604332 360 ntBASIC0.96□□□□□ -2.26
CCDC59Q9P031 AC022217.4-201ENST00000604389 163 ntBASIC0.96□□□□□ -2.26
CCDC59Q9P031 AL359075.3-201ENST00000613288 217 ntBASIC0.96□□□□□ -2.26
CCDC59Q9P031 FAM157A-202ENST00000615155 405 ntBASIC0.96□□□□□ -2.26
CCDC59Q9P031 AC073534.2-201ENST00000620377 381 ntBASIC0.96□□□□□ -2.26
CCDC59Q9P031 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.96□□□□□ -2.26
CCDC59Q9P031 MIR514A2-201ENST00000385131 88 ntBASIC0.95□□□□□ -2.26
CCDC59Q9P031 MIR514A3-201ENST00000385132 88 ntBASIC0.95□□□□□ -2.26
CCDC59Q9P031 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CCDC59Q9P031 AC005002.2-201ENST00000438228 269 ntBASIC0.95□□□□□ -2.26
CCDC59Q9P031 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.95□□□□□ -2.26
CCDC59Q9P031 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.95□□□□□ -2.26
CCDC59Q9P031 RNU1-41P-201ENST00000516161 162 ntBASIC0.95□□□□□ -2.26
CCDC59Q9P031 RNU1-48P-201ENST00000516400 162 ntBASIC0.95□□□□□ -2.26
CCDC59Q9P031 MTND1P5-201ENST00000517906 940 ntBASIC0.95□□□□□ -2.26
CCDC59Q9P031 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.95□□□□□ -2.26
CCDC59Q9P031 AC016957.1-201ENST00000534895 309 ntBASIC0.95□□□□□ -2.26
CCDC59Q9P031 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.95□□□□□ -2.26
CCDC59Q9P031 SNORD11B-201ENST00000607707 90 ntBASIC0.95□□□□□ -2.26
CCDC59Q9P031 AL133215.3-201ENST00000609801 448 ntBASIC0.95□□□□□ -2.26
CCDC59Q9P031 ELL2P3-201ENST00000457883 1602 ntBASIC0.95□□□□□ -2.26
CCDC59Q9P031 Y_RNA.111-201ENST00000363248 100 ntBASIC0.94□□□□□ -2.26
CCDC59Q9P031 SNORA70.7-201ENST00000384159 133 ntBASIC0.94□□□□□ -2.26
CCDC59Q9P031 SNORA25-201ENST00000384384 134 ntBASIC0.94□□□□□ -2.26
CCDC59Q9P031 RN7SKP200-201ENST00000410564 320 ntBASIC0.94□□□□□ -2.26
CCDC59Q9P031 TPT1P7-201ENST00000458300 517 ntBASIC0.94□□□□□ -2.26
CCDC59Q9P031 RPL39P38-201ENST00000467018 153 ntBASIC0.94□□□□□ -2.26
CCDC59Q9P031 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.94□□□□□ -2.26
CCDC59Q9P031 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.94□□□□□ -2.26
CCDC59Q9P031 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.94□□□□□ -2.26
CCDC59Q9P031 RNA5SP54-201ENST00000516951 92 ntBASIC0.94□□□□□ -2.26
CCDC59Q9P031 RNU6-835P-201ENST00000516974 104 ntBASIC0.94□□□□□ -2.26
CCDC59Q9P031 RNU6-165P-201ENST00000517170 99 ntBASIC0.94□□□□□ -2.26
CCDC59Q9P031 RNA5SP454-201ENST00000517231 127 ntBASIC0.94□□□□□ -2.26
CCDC59Q9P031 AC026371.1-201ENST00000551867 419 ntBASIC0.94□□□□□ -2.26
CCDC59Q9P031 DNAJC19P9-201ENST00000555084 351 ntBASIC0.94□□□□□ -2.26
CCDC59Q9P031 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.94□□□□□ -2.26
CCDC59Q9P031 AL022345.2-201ENST00000606307 135 ntBASIC0.94□□□□□ -2.26
CCDC59Q9P031 BX284668.6-201ENST00000606899 438 ntBASIC0.94□□□□□ -2.26
CCDC59Q9P031 AC004492.1-201ENST00000607036 742 ntBASIC0.94□□□□□ -2.26
CCDC59Q9P031 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.94□□□□□ -2.26
CCDC59Q9P031 AC027335.2-201ENST00000624030 375 ntBASIC0.94□□□□□ -2.26
CCDC59Q9P031 AC090582.1-201ENST00000636321 199 ntBASIC0.94□□□□□ -2.26
CCDC59Q9P031 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.94□□□□□ -2.26
CCDC59Q9P031 Y_RNA.77-201ENST00000362962 107 ntBASIC0.93□□□□□ -2.26
CCDC59Q9P031 SNORD50.1-201ENST00000362987 71 ntBASIC0.93□□□□□ -2.26
CCDC59Q9P031 RNU1-22P-201ENST00000363334 158 ntBASIC0.93□□□□□ -2.26
CCDC59Q9P031 SNORD113-7-201ENST00000363762 77 ntBASIC0.93□□□□□ -2.26
CCDC59Q9P031 RNU6-1187P-201ENST00000364771 110 ntBASIC0.93□□□□□ -2.26
CCDC59Q9P031 AL590002.1-201ENST00000406554 418 ntBASIC0.93□□□□□ -2.26
CCDC59Q9P031 RNU6-648P-201ENST00000410190 107 ntBASIC0.93□□□□□ -2.26
CCDC59Q9P031 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.93□□□□□ -2.26
CCDC59Q9P031 MTCO1P20-201ENST00000425366 358 ntBASIC0.93□□□□□ -2.26
CCDC59Q9P031 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.93□□□□□ -2.26
CCDC59Q9P031 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.93□□□□□ -2.26
CCDC59Q9P031 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.93□□□□□ -2.26
CCDC59Q9P031 AC083904.1-201ENST00000487828 231 ntBASIC0.93□□□□□ -2.26
CCDC59Q9P031 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.93□□□□□ -2.26
CCDC59Q9P031 AL390123.1-201ENST00000603216 237 ntBASIC0.93□□□□□ -2.26
CCDC59Q9P031 MIR8054-201ENST00000620877 86 ntBASIC0.93□□□□□ -2.26
CCDC59Q9P031 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.93□□□□□ -2.26
CCDC59Q9P031 AC097520.1-201ENST00000624435 385 ntBASIC0.93□□□□□ -2.26
CCDC59Q9P031 AC121333.1-201ENST00000567488 2709 ntBASIC0.93□□□□□ -2.26
CCDC59Q9P031 RNU6-522P-201ENST00000364497 107 ntBASIC0.92□□□□□ -2.26
CCDC59Q9P031 RNU6-245P-201ENST00000384020 107 ntBASIC0.92□□□□□ -2.26
CCDC59Q9P031 Y_RNA.481-201ENST00000384373 102 ntBASIC0.92□□□□□ -2.26
CCDC59Q9P031 MIR32-201ENST00000384965 70 ntBASIC0.92□□□□□ -2.26
CCDC59Q9P031 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
CCDC59Q9P031 DEFB108C-201ENST00000400154 252 ntBASIC0.92□□□□□ -2.26
CCDC59Q9P031 RNU6-1186P-201ENST00000410429 97 ntBASIC0.92□□□□□ -2.26
CCDC59Q9P031 AC245047.3-201ENST00000429428 127 ntBASIC0.92□□□□□ -2.26
CCDC59Q9P031 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.92□□□□□ -2.26
CCDC59Q9P031 AC079354.2-201ENST00000453523 154 ntBASIC0.92□□□□□ -2.26
CCDC59Q9P031 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.92□□□□□ -2.26
CCDC59Q9P031 RNU7-187P-201ENST00000458985 68 ntBASIC0.92□□□□□ -2.26
CCDC59Q9P031 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.92□□□□□ -2.26
CCDC59Q9P031 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.92□□□□□ -2.26
CCDC59Q9P031 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.92□□□□□ -2.26
CCDC59Q9P031 MIR3974-201ENST00000637126 96 ntBASIC0.92□□□□□ -2.26
CCDC59Q9P031 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
CCDC59Q9P031 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
CCDC59Q9P031 Y_RNA.231-201ENST00000364358 102 ntBASIC0.91□□□□□ -2.26
CCDC59Q9P031 SNORD87-201ENST00000364849 89 ntBASIC0.91□□□□□ -2.26
CCDC59Q9P031 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
CCDC59Q9P031 RNU6-790P-201ENST00000384479 105 ntBASIC0.91□□□□□ -2.26
CCDC59Q9P031 RNU6-440P-201ENST00000390882 105 ntBASIC0.91□□□□□ -2.26
CCDC59Q9P031 Z82188.1-201ENST00000436709 154 ntBASIC0.91□□□□□ -2.26
CCDC59Q9P031 AL353572.1-201ENST00000442490 417 ntBASIC0.91□□□□□ -2.26
CCDC59Q9P031 RPL39P28-201ENST00000465655 155 ntBASIC0.91□□□□□ -2.26
CCDC59Q9P031 AC092991.1-201ENST00000477176 376 ntBASIC0.91□□□□□ -2.26
CCDC59Q9P031 SNORD116-28-201ENST00000516123 91 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms