Protein–RNA interactions for Protein: Q9NY59

SMPD3, Sphingomyelin phosphodiesterase 3, humanhuman

Predicted RBP Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3Q9NY59 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.36□□□□□ -2.19
SMPD3Q9NY59 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.36□□□□□ -2.19
SMPD3Q9NY59 MTCO3P8-201ENST00000453691 755 ntBASIC1.36□□□□□ -2.19
SMPD3Q9NY59 AC007215.1-201ENST00000464893 276 ntBASIC1.36□□□□□ -2.19
SMPD3Q9NY59 MTCYBP18-201ENST00000501056 747 ntBASIC1.36□□□□□ -2.19
SMPD3Q9NY59 ACA59.1-201ENST00000515966 143 ntBASIC1.36□□□□□ -2.19
SMPD3Q9NY59 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.36□□□□□ -2.19
SMPD3Q9NY59 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.36□□□□□ -2.19
SMPD3Q9NY59 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.36□□□□□ -2.19
SMPD3Q9NY59 RAB11AP2-201ENST00000545905 639 ntBASIC1.36□□□□□ -2.19
SMPD3Q9NY59 AC084364.2-201ENST00000546924 395 ntBASIC1.36□□□□□ -2.19
SMPD3Q9NY59 AC005668.1-201ENST00000571142 476 ntBASIC1.36□□□□□ -2.19
SMPD3Q9NY59 AL158827.2-201ENST00000602494 330 ntBASIC1.36□□□□□ -2.19
SMPD3Q9NY59 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.36□□□□□ -2.19
SMPD3Q9NY59 AL691447.3-201ENST00000635020 330 ntBASIC1.36□□□□□ -2.19
SMPD3Q9NY59 AC100810.6-201ENST00000638068 285 ntBASIC1.36□□□□□ -2.19
SMPD3Q9NY59 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.36□□□□□ -2.19
SMPD3Q9NY59 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.36□□□□□ -2.19
SMPD3Q9NY59 MTND5P35-201ENST00000557537 1720 ntBASIC1.35□□□□□ -2.19
SMPD3Q9NY59 SNORD116-11-201ENST00000383882 92 ntBASIC1.35□□□□□ -2.19
SMPD3Q9NY59 RNU6-418P-201ENST00000384035 107 ntBASIC1.35□□□□□ -2.19
SMPD3Q9NY59 Y_RNA.453-201ENST00000384223 109 ntBASIC1.35□□□□□ -2.19
SMPD3Q9NY59 MIR515-2-201ENST00000384883 83 ntBASIC1.35□□□□□ -2.19
SMPD3Q9NY59 MIR515-1-201ENST00000384884 83 ntBASIC1.35□□□□□ -2.19
SMPD3Q9NY59 SNORA40.18-201ENST00000391200 128 ntBASIC1.35□□□□□ -2.19
SMPD3Q9NY59 AL358453.1-201ENST00000422522 250 ntBASIC1.35□□□□□ -2.19
SMPD3Q9NY59 AC079354.2-201ENST00000453523 154 ntBASIC1.35□□□□□ -2.19
SMPD3Q9NY59 AC114982.1-201ENST00000469402 321 ntBASIC1.35□□□□□ -2.19
SMPD3Q9NY59 RPL30P7-201ENST00000479312 323 ntBASIC1.35□□□□□ -2.19
SMPD3Q9NY59 RNU6-1314P-201ENST00000517139 104 ntBASIC1.35□□□□□ -2.19
SMPD3Q9NY59 RRN3P3-201ENST00000549207 578 ntBASIC1.35□□□□□ -2.19
SMPD3Q9NY59 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.35□□□□□ -2.19
SMPD3Q9NY59 SNORA59B-202ENST00000578183 701 ntBASIC1.35□□□□□ -2.19
SMPD3Q9NY59 MIR3942-201ENST00000585264 109 ntBASIC1.35□□□□□ -2.19
SMPD3Q9NY59 AC019193.3-201ENST00000609144 554 ntBASIC1.35□□□□□ -2.19
SMPD3Q9NY59 AC009318.2-201ENST00000610917 651 ntBASIC1.35□□□□□ -2.19
SMPD3Q9NY59 Y_RNA.157-201ENST00000363638 102 ntBASIC1.34□□□□□ -2.19
SMPD3Q9NY59 RNU4-9P-201ENST00000364951 139 ntBASIC1.34□□□□□ -2.19
SMPD3Q9NY59 SNORD115-47-201ENST00000391226 86 ntBASIC1.34□□□□□ -2.19
SMPD3Q9NY59 SNORA26.9-201ENST00000391322 122 ntBASIC1.34□□□□□ -2.19
SMPD3Q9NY59 AC004866.1-201ENST00000411748 78 ntBASIC1.34□□□□□ -2.19
SMPD3Q9NY59 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.34□□□□□ -2.19
SMPD3Q9NY59 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.34□□□□□ -2.19
SMPD3Q9NY59 RPS27P16-201ENST00000425758 201 ntBASIC1.34□□□□□ -2.19
SMPD3Q9NY59 NFU1P2-201ENST00000448700 469 ntBASIC1.34□□□□□ -2.19
SMPD3Q9NY59 AC074290.1-201ENST00000448883 135 ntBASIC1.34□□□□□ -2.19
SMPD3Q9NY59 snoU13.27-201ENST00000459278 104 ntBASIC1.34□□□□□ -2.19
SMPD3Q9NY59 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.34□□□□□ -2.19
SMPD3Q9NY59 Y_RNA.655-201ENST00000515919 96 ntBASIC1.34□□□□□ -2.19
SMPD3Q9NY59 RNU6-1041P-201ENST00000516254 102 ntBASIC1.34□□□□□ -2.19
SMPD3Q9NY59 RNU6-295P-201ENST00000516901 104 ntBASIC1.34□□□□□ -2.19
SMPD3Q9NY59 RNU6-273P-201ENST00000516937 96 ntBASIC1.34□□□□□ -2.19
SMPD3Q9NY59 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.34□□□□□ -2.19
SMPD3Q9NY59 MIR3937-201ENST00000580135 106 ntBASIC1.34□□□□□ -2.19
SMPD3Q9NY59 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.34□□□□□ -2.19
SMPD3Q9NY59 AC124303.1-201ENST00000605703 360 ntBASIC1.34□□□□□ -2.19
SMPD3Q9NY59 MIR3662-201ENST00000637030 95 ntBASIC1.34□□□□□ -2.19
SMPD3Q9NY59 ZNF204P-201ENST00000416749 2397 ntBASIC1.34□□□□□ -2.2
SMPD3Q9NY59 BX322639.1-202ENST00000423987 2213 ntBASIC1.34□□□□□ -2.2
SMPD3Q9NY59 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SMPD3Q9NY59 U8.10-201ENST00000384260 133 ntBASIC1.33□□□□□ -2.2
SMPD3Q9NY59 MIR487A-201ENST00000385009 80 ntBASIC1.33□□□□□ -2.2
SMPD3Q9NY59 AL117342.1-201ENST00000404861 406 ntBASIC1.33□□□□□ -2.2
SMPD3Q9NY59 MIR1261-201ENST00000408659 82 ntBASIC1.33□□□□□ -2.2
SMPD3Q9NY59 AL161935.2-201ENST00000414627 60 ntBASIC1.33□□□□□ -2.2
SMPD3Q9NY59 EIF1P1-201ENST00000421436 341 ntBASIC1.33□□□□□ -2.2
SMPD3Q9NY59 SDAD1P3-201ENST00000427380 333 ntBASIC1.33□□□□□ -2.2
SMPD3Q9NY59 MTND1P34-201ENST00000438556 671 ntBASIC1.33□□□□□ -2.2
SMPD3Q9NY59 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.33□□□□□ -2.2
SMPD3Q9NY59 HMGN2P9-201ENST00000476875 229 ntBASIC1.33□□□□□ -2.2
SMPD3Q9NY59 AC011406.1-201ENST00000512440 370 ntBASIC1.33□□□□□ -2.2
SMPD3Q9NY59 RNU6-864P-201ENST00000516256 108 ntBASIC1.33□□□□□ -2.2
SMPD3Q9NY59 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.33□□□□□ -2.2
SMPD3Q9NY59 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
SMPD3Q9NY59 AC015688.6-201ENST00000577737 104 ntBASIC1.33□□□□□ -2.2
SMPD3Q9NY59 AP003465.2-201ENST00000602571 373 ntBASIC1.33□□□□□ -2.2
SMPD3Q9NY59 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.33□□□□□ -2.2
SMPD3Q9NY59 MIR8081-201ENST00000611533 95 ntBASIC1.33□□□□□ -2.2
SMPD3Q9NY59 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.33□□□□□ -2.2
SMPD3Q9NY59 AC006504.8-201ENST00000621046 635 ntBASIC1.33□□□□□ -2.2
SMPD3Q9NY59 MIR3688-2-201ENST00000636963 87 ntBASIC1.33□□□□□ -2.2
SMPD3Q9NY59 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
SMPD3Q9NY59 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SMPD3Q9NY59 RNU6-1305P-201ENST00000364353 104 ntBASIC1.32□□□□□ -2.2
SMPD3Q9NY59 RNU6-1013P-201ENST00000384180 107 ntBASIC1.32□□□□□ -2.2
SMPD3Q9NY59 RNU6-1235P-201ENST00000384559 107 ntBASIC1.32□□□□□ -2.2
SMPD3Q9NY59 MIR32-201ENST00000384965 70 ntBASIC1.32□□□□□ -2.2
SMPD3Q9NY59 MIR504-201ENST00000385065 83 ntBASIC1.32□□□□□ -2.2
SMPD3Q9NY59 MIR517C-201ENST00000385103 95 ntBASIC1.32□□□□□ -2.2
SMPD3Q9NY59 MIR548B-201ENST00000385247 97 ntBASIC1.32□□□□□ -2.2
SMPD3Q9NY59 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
SMPD3Q9NY59 U8.13-201ENST00000390842 128 ntBASIC1.32□□□□□ -2.2
SMPD3Q9NY59 MRPL35P1-201ENST00000404272 572 ntBASIC1.32□□□□□ -2.2
SMPD3Q9NY59 MIR1323-201ENST00000408090 73 ntBASIC1.32□□□□□ -2.2
SMPD3Q9NY59 AC060773.1-201ENST00000421698 310 ntBASIC1.32□□□□□ -2.2
SMPD3Q9NY59 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.32□□□□□ -2.2
SMPD3Q9NY59 MTND4LP16-201ENST00000440828 295 ntBASIC1.32□□□□□ -2.2
SMPD3Q9NY59 RNU6-498P-201ENST00000459468 107 ntBASIC1.32□□□□□ -2.2
SMPD3Q9NY59 RNU6-1146P-201ENST00000516282 102 ntBASIC1.32□□□□□ -2.2
SMPD3Q9NY59 RNU6-948P-201ENST00000516374 107 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 288.1 ms