Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
NDE1Q9NXR1 Y_RNA.80-201ENST00000362996 102 ntBASIC1.9□□□□□ -2.11
NDE1Q9NXR1 U8.2-201ENST00000363156 134 ntBASIC1.9□□□□□ -2.11
NDE1Q9NXR1 Y_RNA.485-201ENST00000384395 102 ntBASIC1.9□□□□□ -2.11
NDE1Q9NXR1 USP9YP16-201ENST00000430287 407 ntBASIC1.9□□□□□ -2.11
NDE1Q9NXR1 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.9□□□□□ -2.11
NDE1Q9NXR1 USP9YP23-201ENST00000455085 407 ntBASIC1.9□□□□□ -2.11
NDE1Q9NXR1 CYP2C59P-201ENST00000457790 269 ntBASIC1.9□□□□□ -2.11
NDE1Q9NXR1 AC018868.1-201ENST00000491307 315 ntBASIC1.9□□□□□ -2.11
NDE1Q9NXR1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.9□□□□□ -2.11
NDE1Q9NXR1 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.9□□□□□ -2.11
NDE1Q9NXR1 SNORA48.11-201ENST00000517015 89 ntBASIC1.9□□□□□ -2.11
NDE1Q9NXR1 RNU6-58P-201ENST00000517143 103 ntBASIC1.9□□□□□ -2.11
NDE1Q9NXR1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.9□□□□□ -2.11
NDE1Q9NXR1 MIR5695-201ENST00000579717 85 ntBASIC1.9□□□□□ -2.11
NDE1Q9NXR1 AL627230.6-201ENST00000611129 280 ntBASIC1.9□□□□□ -2.11
NDE1Q9NXR1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.9□□□□□ -2.11
NDE1Q9NXR1 MIR1248-201ENST00000629190 106 ntBASIC1.9□□□□□ -2.11
NDE1Q9NXR1 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
NDE1Q9NXR1 RNU6-873P-201ENST00000363833 107 ntBASIC1.89□□□□□ -2.11
NDE1Q9NXR1 RNA5SP240-201ENST00000365355 128 ntBASIC1.89□□□□□ -2.11
NDE1Q9NXR1 RNU6-546P-201ENST00000383991 107 ntBASIC1.89□□□□□ -2.11
NDE1Q9NXR1 Y_RNA.428-201ENST00000384078 102 ntBASIC1.89□□□□□ -2.11
NDE1Q9NXR1 Y_RNA.557-201ENST00000384680 107 ntBASIC1.89□□□□□ -2.11
NDE1Q9NXR1 MIR625-201ENST00000385047 85 ntBASIC1.89□□□□□ -2.11
NDE1Q9NXR1 MIR504-201ENST00000385065 83 ntBASIC1.89□□□□□ -2.11
NDE1Q9NXR1 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.89□□□□□ -2.11
NDE1Q9NXR1 PMCHL1-202ENST00000423102 261 ntBASIC1.89□□□□□ -2.11
NDE1Q9NXR1 MTCO3P8-201ENST00000453691 755 ntBASIC1.89□□□□□ -2.11
NDE1Q9NXR1 ANXA2P1-201ENST00000505539 926 ntBASIC1.89□□□□□ -2.11
NDE1Q9NXR1 RNU6-237P-201ENST00000515985 71 ntBASIC1.89□□□□□ -2.11
NDE1Q9NXR1 RNU6-976P-201ENST00000516086 111 ntBASIC1.89□□□□□ -2.11
NDE1Q9NXR1 RNU6-1098P-201ENST00000516772 96 ntBASIC1.89□□□□□ -2.11
NDE1Q9NXR1 SNORD116.3-201ENST00000517176 78 ntBASIC1.89□□□□□ -2.11
NDE1Q9NXR1 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.89□□□□□ -2.11
NDE1Q9NXR1 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.89□□□□□ -2.11
NDE1Q9NXR1 AC092447.9-201ENST00000603395 144 ntBASIC1.89□□□□□ -2.11
NDE1Q9NXR1 AC137590.2-201ENST00000619709 240 ntBASIC1.89□□□□□ -2.11
NDE1Q9NXR1 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
NDE1Q9NXR1 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.89□□□□□ -2.11
NDE1Q9NXR1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
NDE1Q9NXR1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.88□□□□□ -2.11
NDE1Q9NXR1 RNU4-42P-201ENST00000364738 142 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 RNU1-91P-201ENST00000364746 163 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 Y_RNA.364-201ENST00000365532 101 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 Y_RNA.395-201ENST00000383945 109 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 RNY1P14-201ENST00000384426 108 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 MIR10B-201ENST00000385011 110 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 MIR1294-201ENST00000408503 142 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 Y_RNA.605-201ENST00000410577 105 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 AL160004.2-201ENST00000432935 350 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 AC004386.2-201ENST00000441858 148 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.88□□□□□ -2.11
NDE1Q9NXR1 snoU13.26-201ENST00000459452 105 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 Y_RNA.631-201ENST00000459607 101 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 HMGB3P17-201ENST00000504195 649 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.88□□□□□ -2.11
NDE1Q9NXR1 ATP5EP1-201ENST00000510257 156 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.88□□□□□ -2.11
NDE1Q9NXR1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.88□□□□□ -2.11
NDE1Q9NXR1 SNORA4.4-201ENST00000515921 135 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 RNU2-44P-201ENST00000516795 194 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 SNORA31.25-201ENST00000517242 134 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 RNU2-19P-201ENST00000517288 84 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 AC020661.2-201ENST00000560114 134 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.88□□□□□ -2.11
NDE1Q9NXR1 AC024614.2-201ENST00000577584 372 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 MIR4524B-201ENST00000581569 115 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 MIR3171-201ENST00000584270 74 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 AC007229.1-201ENST00000590455 412 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 AL356055.1-201ENST00000602528 446 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 CYP2C61P-201ENST00000604072 290 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 AC006157.1-201ENST00000611750 366 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 AC064859.1-201ENST00000624741 174 ntBASIC1.88□□□□□ -2.11
NDE1Q9NXR1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.88□□□□□ -2.11
NDE1Q9NXR1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.88□□□□□ -2.11
NDE1Q9NXR1 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
NDE1Q9NXR1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
NDE1Q9NXR1 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.87□□□□□ -2.11
NDE1Q9NXR1 RNA5SP361-201ENST00000362686 118 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 Y_RNA.112-201ENST00000363250 102 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 RNU6-727P-201ENST00000363592 107 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 RNU4-76P-201ENST00000364509 141 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 Y_RNA.252-201ENST00000364556 101 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 SNORA25B-201ENST00000365507 128 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 SNORA69.1-201ENST00000390904 137 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 RNU6-159P-201ENST00000391080 106 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 MIR548P-201ENST00000408336 84 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 RNU2-48P-201ENST00000410694 191 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 RNU6-1001P-201ENST00000411265 100 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 RNA5SP270-201ENST00000411361 118 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 AC018865.2-201ENST00000423631 129 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
NDE1Q9NXR1 AC099799.1-201ENST00000439809 192 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.87□□□□□ -2.11
NDE1Q9NXR1 AL035666.1-201ENST00000446195 348 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.87□□□□□ -2.11
NDE1Q9NXR1 MRPS17P9-201ENST00000511924 393 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 RNU6-1114P-201ENST00000516022 107 ntBASIC1.87□□□□□ -2.11
NDE1Q9NXR1 SNORA25.14-201ENST00000516481 132 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms