Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.94□□□□□ -2.26
TREX1Q9NSU2 RNU6-1069P-201ENST00000516612 133 ntBASIC0.94□□□□□ -2.26
TREX1Q9NSU2 RNA5SP102-201ENST00000516865 106 ntBASIC0.94□□□□□ -2.26
TREX1Q9NSU2 MIR4452-201ENST00000583004 71 ntBASIC0.94□□□□□ -2.26
TREX1Q9NSU2 AC073648.5-201ENST00000603502 305 ntBASIC0.94□□□□□ -2.26
TREX1Q9NSU2 AL391646.1-201ENST00000603860 190 ntBASIC0.94□□□□□ -2.26
TREX1Q9NSU2 SNRPGP20-201ENST00000604477 205 ntBASIC0.94□□□□□ -2.26
TREX1Q9NSU2 AC097065.2-201ENST00000608159 533 ntBASIC0.94□□□□□ -2.26
TREX1Q9NSU2 AL121757.2-201ENST00000611223 313 ntBASIC0.94□□□□□ -2.26
TREX1Q9NSU2 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.94□□□□□ -2.26
TREX1Q9NSU2 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.94□□□□□ -2.26
TREX1Q9NSU2 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.94□□□□□ -2.26
TREX1Q9NSU2 RNU6-1329P-201ENST00000365664 107 ntBASIC0.93□□□□□ -2.26
TREX1Q9NSU2 MIR515-2-201ENST00000384883 83 ntBASIC0.93□□□□□ -2.26
TREX1Q9NSU2 MIR515-1-201ENST00000384884 83 ntBASIC0.93□□□□□ -2.26
TREX1Q9NSU2 MIR521-1-201ENST00000384902 87 ntBASIC0.93□□□□□ -2.26
TREX1Q9NSU2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
TREX1Q9NSU2 RNA5SP109-201ENST00000391010 116 ntBASIC0.93□□□□□ -2.26
TREX1Q9NSU2 RPS3AP17-201ENST00000472594 777 ntBASIC0.93□□□□□ -2.26
TREX1Q9NSU2 RNA5SP401-201ENST00000515920 127 ntBASIC0.93□□□□□ -2.26
TREX1Q9NSU2 Y_RNA.695-201ENST00000516715 107 ntBASIC0.93□□□□□ -2.26
TREX1Q9NSU2 SUMO2P16-201ENST00000519475 264 ntBASIC0.93□□□□□ -2.26
TREX1Q9NSU2 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.93□□□□□ -2.26
TREX1Q9NSU2 MIR4424-201ENST00000585257 86 ntBASIC0.93□□□□□ -2.26
TREX1Q9NSU2 Y_RNA.118-201ENST00000363300 101 ntBASIC0.92□□□□□ -2.26
TREX1Q9NSU2 Y_RNA.296-201ENST00000364930 108 ntBASIC0.92□□□□□ -2.26
TREX1Q9NSU2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
TREX1Q9NSU2 RPL21P1-201ENST00000399532 476 ntBASIC0.92□□□□□ -2.26
TREX1Q9NSU2 MIR320B2-201ENST00000408479 138 ntBASIC0.92□□□□□ -2.26
TREX1Q9NSU2 AC004866.1-201ENST00000411748 78 ntBASIC0.92□□□□□ -2.26
TREX1Q9NSU2 RPS26P42-201ENST00000413485 326 ntBASIC0.92□□□□□ -2.26
TREX1Q9NSU2 AL353193.1-201ENST00000421444 268 ntBASIC0.92□□□□□ -2.26
TREX1Q9NSU2 RPS27P1-201ENST00000450552 247 ntBASIC0.92□□□□□ -2.26
TREX1Q9NSU2 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.92□□□□□ -2.26
TREX1Q9NSU2 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
TREX1Q9NSU2 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.92□□□□□ -2.26
TREX1Q9NSU2 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.92□□□□□ -2.26
TREX1Q9NSU2 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC0.92□□□□□ -2.26
TREX1Q9NSU2 FGF7P1-201ENST00000582820 288 ntBASIC0.92□□□□□ -2.26
TREX1Q9NSU2 AL929325.1-201ENST00000603096 117 ntBASIC0.92□□□□□ -2.26
TREX1Q9NSU2 AC087752.4-201ENST00000605911 462 ntBASIC0.92□□□□□ -2.26
TREX1Q9NSU2 AC103705.1-201ENST00000619013 241 ntBASIC0.92□□□□□ -2.26
TREX1Q9NSU2 MIR7111-201ENST00000619751 72 ntBASIC0.92□□□□□ -2.26
TREX1Q9NSU2 AC023510.2-201ENST00000622162 746 ntBASIC0.92□□□□□ -2.26
TREX1Q9NSU2 OR5AK4P-201ENST00000635912 903 ntBASIC0.92□□□□□ -2.26
TREX1Q9NSU2 MTND4P5-201ENST00000435821 1374 ntBASIC0.92□□□□□ -2.26
TREX1Q9NSU2 Y_RNA.1-201ENST00000352915 104 ntBASIC0.91□□□□□ -2.26
TREX1Q9NSU2 Y_RNA.287-201ENST00000364853 94 ntBASIC0.91□□□□□ -2.26
TREX1Q9NSU2 RNU6-534P-201ENST00000364877 106 ntBASIC0.91□□□□□ -2.26
TREX1Q9NSU2 RNU4-66P-201ENST00000365199 138 ntBASIC0.91□□□□□ -2.26
TREX1Q9NSU2 MIR532-201ENST00000385025 91 ntBASIC0.91□□□□□ -2.26
TREX1Q9NSU2 AL356776.1-201ENST00000406574 447 ntBASIC0.91□□□□□ -2.26
TREX1Q9NSU2 AL663109.1-201ENST00000411498 844 ntBASIC0.91□□□□□ -2.26
TREX1Q9NSU2 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.91□□□□□ -2.26
TREX1Q9NSU2 AC010154.1-201ENST00000425857 269 ntBASIC0.91□□□□□ -2.26
TREX1Q9NSU2 MTCO2P19-201ENST00000427513 598 ntBASIC0.91□□□□□ -2.26
TREX1Q9NSU2 MRPS10P2-201ENST00000431226 381 ntBASIC0.91□□□□□ -2.26
TREX1Q9NSU2 AC103851.1-201ENST00000506833 274 ntBASIC0.91□□□□□ -2.26
TREX1Q9NSU2 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.91□□□□□ -2.26
TREX1Q9NSU2 RNA5SP220-201ENST00000516298 104 ntBASIC0.91□□□□□ -2.26
TREX1Q9NSU2 RNU1-117P-201ENST00000517041 158 ntBASIC0.91□□□□□ -2.26
TREX1Q9NSU2 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
TREX1Q9NSU2 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.91□□□□□ -2.26
TREX1Q9NSU2 MIR3664-201ENST00000579074 99 ntBASIC0.91□□□□□ -2.26
TREX1Q9NSU2 AC136443.5-201ENST00000603741 370 ntBASIC0.91□□□□□ -2.26
TREX1Q9NSU2 AL078596.1-201ENST00000624856 447 ntBASIC0.91□□□□□ -2.26
TREX1Q9NSU2 AL133216.2-202ENST00000634512 349 ntBASIC0.91□□□□□ -2.26
TREX1Q9NSU2 AC068647.2-201ENST00000637380 353 ntBASIC0.91□□□□□ -2.26
TREX1Q9NSU2 ZNF204P-201ENST00000416749 2397 ntBASIC0.9□□□□□ -2.27
TREX1Q9NSU2 MIR96-201ENST00000362288 78 ntBASIC0.9□□□□□ -2.27
TREX1Q9NSU2 SNORD114-27-201ENST00000363766 70 ntBASIC0.9□□□□□ -2.27
TREX1Q9NSU2 RNU6-1187P-201ENST00000364771 110 ntBASIC0.9□□□□□ -2.27
TREX1Q9NSU2 Y_RNA.378-201ENST00000365652 113 ntBASIC0.9□□□□□ -2.27
TREX1Q9NSU2 RNU6-1080P-201ENST00000383982 107 ntBASIC0.9□□□□□ -2.27
TREX1Q9NSU2 RNU6-1103P-201ENST00000384150 107 ntBASIC0.9□□□□□ -2.27
TREX1Q9NSU2 RNU6-42P-201ENST00000384165 107 ntBASIC0.9□□□□□ -2.27
TREX1Q9NSU2 RNU6-933P-201ENST00000384424 107 ntBASIC0.9□□□□□ -2.27
TREX1Q9NSU2 RNY1P14-201ENST00000384426 108 ntBASIC0.9□□□□□ -2.27
TREX1Q9NSU2 RNY3P9-201ENST00000384727 106 ntBASIC0.9□□□□□ -2.27
TREX1Q9NSU2 MIR586-201ENST00000385035 97 ntBASIC0.9□□□□□ -2.27
TREX1Q9NSU2 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.9□□□□□ -2.27
TREX1Q9NSU2 RPS4XP11-201ENST00000446897 772 ntBASIC0.9□□□□□ -2.27
TREX1Q9NSU2 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.9□□□□□ -2.27
TREX1Q9NSU2 RNU6-956P-201ENST00000458868 103 ntBASIC0.9□□□□□ -2.27
TREX1Q9NSU2 SRRM1P2-201ENST00000464531 1192 ntBASIC0.9□□□□□ -2.27
TREX1Q9NSU2 BET1P1-201ENST00000482276 359 ntBASIC0.9□□□□□ -2.27
TREX1Q9NSU2 AF186996.7-201ENST00000492781 209 ntBASIC0.9□□□□□ -2.27
TREX1Q9NSU2 RNU1-142P-201ENST00000516682 145 ntBASIC0.9□□□□□ -2.27
TREX1Q9NSU2 MTND1P35-201ENST00000526739 508 ntBASIC0.9□□□□□ -2.27
TREX1Q9NSU2 SCOCP1-201ENST00000554676 349 ntBASIC0.9□□□□□ -2.27
TREX1Q9NSU2 AL157687.1-201ENST00000554853 619 ntBASIC0.9□□□□□ -2.27
TREX1Q9NSU2 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.9□□□□□ -2.27
TREX1Q9NSU2 MIR4742-201ENST00000581069 85 ntBASIC0.9□□□□□ -2.27
TREX1Q9NSU2 MIR5692C1-201ENST00000585309 91 ntBASIC0.9□□□□□ -2.27
TREX1Q9NSU2 AC146944.4-201ENST00000602697 718 ntBASIC0.9□□□□□ -2.27
TREX1Q9NSU2 AC009509.4-201ENST00000619202 509 ntBASIC0.9□□□□□ -2.27
TREX1Q9NSU2 AL391516.1-201ENST00000554380 2449 ntBASIC0.9□□□□□ -2.27
TREX1Q9NSU2 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
TREX1Q9NSU2 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
TREX1Q9NSU2 RNU6-1123P-201ENST00000362347 106 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms