Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 AL137100.2-201ENST00000555786 315 ntBASIC0.11□□□□□ -2.39
CTNNBIP1Q9NSA3 MIR4711-201ENST00000578274 70 ntBASIC0.11□□□□□ -2.39
CTNNBIP1Q9NSA3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.11□□□□□ -2.39
CTNNBIP1Q9NSA3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
CTNNBIP1Q9NSA3 AC009159.2-201ENST00000617603 606 ntBASIC0.11□□□□□ -2.39
CTNNBIP1Q9NSA3 SEPT14P17-201ENST00000617978 177 ntBASIC0.11□□□□□ -2.39
CTNNBIP1Q9NSA3 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.11□□□□□ -2.39
CTNNBIP1Q9NSA3 AL138960.2-201ENST00000625145 535 ntBASIC0.11□□□□□ -2.39
CTNNBIP1Q9NSA3 AC100810.6-201ENST00000638068 285 ntBASIC0.11□□□□□ -2.39
CTNNBIP1Q9NSA3 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
CTNNBIP1Q9NSA3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
CTNNBIP1Q9NSA3 RNA5SP264-201ENST00000363115 107 ntBASIC0.1□□□□□ -2.39
CTNNBIP1Q9NSA3 SNORA20.2-201ENST00000383922 131 ntBASIC0.1□□□□□ -2.39
CTNNBIP1Q9NSA3 MIR140-201ENST00000385282 100 ntBASIC0.1□□□□□ -2.39
CTNNBIP1Q9NSA3 MRPS18CP6-201ENST00000423587 223 ntBASIC0.1□□□□□ -2.39
CTNNBIP1Q9NSA3 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.1□□□□□ -2.39
CTNNBIP1Q9NSA3 CALM2P4-201ENST00000430810 426 ntBASIC0.1□□□□□ -2.39
CTNNBIP1Q9NSA3 AC093019.1-201ENST00000443135 252 ntBASIC0.1□□□□□ -2.39
CTNNBIP1Q9NSA3 AC010493.1-201ENST00000513479 292 ntBASIC0.1□□□□□ -2.39
CTNNBIP1Q9NSA3 AC069431.2-201ENST00000604149 1099 ntBASIC0.1□□□□□ -2.39
CTNNBIP1Q9NSA3 AC138749.5-201ENST00000611461 208 ntBASIC0.1□□□□□ -2.39
CTNNBIP1Q9NSA3 U6.73-201ENST00000619194 103 ntBASIC0.1□□□□□ -2.39
CTNNBIP1Q9NSA3 AL049777.1-201ENST00000622740 518 ntBASIC0.1□□□□□ -2.39
CTNNBIP1Q9NSA3 U8.16-201ENST00000391279 133 ntBASIC0.09□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.09□□□□□ -2.4
CTNNBIP1Q9NSA3 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.09□□□□□ -2.4
CTNNBIP1Q9NSA3 AC004854.1-201ENST00000440356 349 ntBASIC0.09□□□□□ -2.4
CTNNBIP1Q9NSA3 Y_RNA.672-201ENST00000516289 104 ntBASIC0.09□□□□□ -2.4
CTNNBIP1Q9NSA3 RSL24D1P11-201ENST00000591045 491 ntBASIC0.09□□□□□ -2.4
CTNNBIP1Q9NSA3 AC025449.1-201ENST00000603896 529 ntBASIC0.09□□□□□ -2.4
CTNNBIP1Q9NSA3 SNRPGP20-201ENST00000604477 205 ntBASIC0.09□□□□□ -2.4
CTNNBIP1Q9NSA3 AC002044.1-201ENST00000606707 158 ntBASIC0.09□□□□□ -2.4
CTNNBIP1Q9NSA3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.09□□□□□ -2.4
CTNNBIP1Q9NSA3 AL138726.1-201ENST00000614873 333 ntBASIC0.09□□□□□ -2.4
CTNNBIP1Q9NSA3 AC007014.2-201ENST00000615581 479 ntBASIC0.09□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU5F-6P-201ENST00000362979 116 ntBASIC0.08□□□□□ -2.4
CTNNBIP1Q9NSA3 RNY1P8-201ENST00000383970 114 ntBASIC0.08□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU6-434P-201ENST00000384376 107 ntBASIC0.08□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU6-393P-201ENST00000384475 107 ntBASIC0.08□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU6-1242P-201ENST00000391052 103 ntBASIC0.08□□□□□ -2.4
CTNNBIP1Q9NSA3 MIR936-201ENST00000401264 98 ntBASIC0.08□□□□□ -2.4
CTNNBIP1Q9NSA3 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU4-46P-201ENST00000410818 138 ntBASIC0.08□□□□□ -2.4
CTNNBIP1Q9NSA3 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.08□□□□□ -2.4
CTNNBIP1Q9NSA3 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.08□□□□□ -2.4
CTNNBIP1Q9NSA3 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.08□□□□□ -2.4
CTNNBIP1Q9NSA3 AC093850.1-201ENST00000454121 251 ntBASIC0.08□□□□□ -2.4
CTNNBIP1Q9NSA3 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.08□□□□□ -2.4
CTNNBIP1Q9NSA3 MIR4298-201ENST00000584380 73 ntBASIC0.08□□□□□ -2.4
CTNNBIP1Q9NSA3 AC068790.2-201ENST00000602601 557 ntBASIC0.08□□□□□ -2.4
CTNNBIP1Q9NSA3 AC009878.1-201ENST00000621819 340 ntBASIC0.08□□□□□ -2.4
CTNNBIP1Q9NSA3 MIR103A2-201ENST00000362154 78 ntBASIC0.07□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU1-133P-201ENST00000364867 167 ntBASIC0.07□□□□□ -2.4
CTNNBIP1Q9NSA3 Y_RNA.367-201ENST00000365544 101 ntBASIC0.07□□□□□ -2.4
CTNNBIP1Q9NSA3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.07□□□□□ -2.4
CTNNBIP1Q9NSA3 SNORA67.2-201ENST00000384300 149 ntBASIC0.07□□□□□ -2.4
CTNNBIP1Q9NSA3 RNA5SP247-201ENST00000411181 105 ntBASIC0.07□□□□□ -2.4
CTNNBIP1Q9NSA3 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.07□□□□□ -2.4
CTNNBIP1Q9NSA3 AL596276.1-201ENST00000434465 418 ntBASIC0.07□□□□□ -2.4
CTNNBIP1Q9NSA3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.07□□□□□ -2.4
CTNNBIP1Q9NSA3 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.07□□□□□ -2.4
CTNNBIP1Q9NSA3 EPS15P1-201ENST00000448836 336 ntBASIC0.07□□□□□ -2.4
CTNNBIP1Q9NSA3 MTND2P31-201ENST00000512602 616 ntBASIC0.07□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU2-69P-201ENST00000516061 100 ntBASIC0.07□□□□□ -2.4
CTNNBIP1Q9NSA3 AC069113.1-201ENST00000517763 267 ntBASIC0.07□□□□□ -2.4
CTNNBIP1Q9NSA3 AC087854.1-201ENST00000519706 414 ntBASIC0.07□□□□□ -2.4
CTNNBIP1Q9NSA3 PCMTD1P2-201ENST00000565017 355 ntBASIC0.07□□□□□ -2.4
CTNNBIP1Q9NSA3 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.07□□□□□ -2.4
CTNNBIP1Q9NSA3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.07□□□□□ -2.4
CTNNBIP1Q9NSA3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.06□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU6-266P-201ENST00000364225 107 ntBASIC0.06□□□□□ -2.4
CTNNBIP1Q9NSA3 RNA5SP299-201ENST00000391203 116 ntBASIC0.06□□□□□ -2.4
CTNNBIP1Q9NSA3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.06□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.06□□□□□ -2.4
CTNNBIP1Q9NSA3 RNA5SP193-201ENST00000410353 107 ntBASIC0.06□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU6-177P-201ENST00000411257 104 ntBASIC0.06□□□□□ -2.4
CTNNBIP1Q9NSA3 AL663109.1-201ENST00000411498 844 ntBASIC0.06□□□□□ -2.4
CTNNBIP1Q9NSA3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.06□□□□□ -2.4
CTNNBIP1Q9NSA3 AC105313.1-201ENST00000509121 353 ntBASIC0.06□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU7-12P-201ENST00000516030 62 ntBASIC0.06□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU6-1223P-201ENST00000517124 104 ntBASIC0.06□□□□□ -2.4
CTNNBIP1Q9NSA3 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.06□□□□□ -2.4
CTNNBIP1Q9NSA3 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.06□□□□□ -2.4
CTNNBIP1Q9NSA3 MIR3192-201ENST00000584920 77 ntBASIC0.06□□□□□ -2.4
CTNNBIP1Q9NSA3 AC005771.1-201ENST00000585581 349 ntBASIC0.06□□□□□ -2.4
CTNNBIP1Q9NSA3 MIR8070-201ENST00000616510 88 ntBASIC0.06□□□□□ -2.4
CTNNBIP1Q9NSA3 AL390237.1-201ENST00000404226 1415 ntBASIC0.05□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU6-501P-201ENST00000364072 100 ntBASIC0.05□□□□□ -2.4
CTNNBIP1Q9NSA3 Y_RNA.265-201ENST00000364677 108 ntBASIC0.05□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU6-169P-201ENST00000365336 107 ntBASIC0.05□□□□□ -2.4
CTNNBIP1Q9NSA3 SNORD105-201ENST00000386910 85 ntBASIC0.05□□□□□ -2.4
CTNNBIP1Q9NSA3 MIR320B2-201ENST00000408479 138 ntBASIC0.05□□□□□ -2.4
CTNNBIP1Q9NSA3 RNA5SP494-201ENST00000410653 129 ntBASIC0.05□□□□□ -2.4
CTNNBIP1Q9NSA3 RPS20P10-201ENST00000451209 253 ntBASIC0.05□□□□□ -2.4
CTNNBIP1Q9NSA3 AC007215.1-201ENST00000464893 276 ntBASIC0.05□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU6-410P-201ENST00000517006 107 ntBASIC0.05□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU6-323P-201ENST00000521915 107 ntBASIC0.05□□□□□ -2.4
CTNNBIP1Q9NSA3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.05□□□□□ -2.4
CTNNBIP1Q9NSA3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
CTNNBIP1Q9NSA3 RNU5B-2P-201ENST00000363036 113 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 184.9 ms