Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 AC010493.1-201ENST00000513479 292 ntBASIC0.78□□□□□ -2.28
SDHAF3Q9NRP4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.78□□□□□ -2.28
SDHAF3Q9NRP4 AC024995.1-201ENST00000523014 93 ntBASIC0.78□□□□□ -2.28
SDHAF3Q9NRP4 AC104576.1-201ENST00000524225 88 ntBASIC0.78□□□□□ -2.28
SDHAF3Q9NRP4 CBX3P8-201ENST00000532412 525 ntBASIC0.78□□□□□ -2.28
SDHAF3Q9NRP4 AL391840.1-201ENST00000571144 367 ntBASIC0.78□□□□□ -2.28
SDHAF3Q9NRP4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.78□□□□□ -2.28
SDHAF3Q9NRP4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.78□□□□□ -2.28
SDHAF3Q9NRP4 AC008088.1-201ENST00000580993 280 ntBASIC0.78□□□□□ -2.28
SDHAF3Q9NRP4 MIR4424-201ENST00000585257 86 ntBASIC0.78□□□□□ -2.28
SDHAF3Q9NRP4 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.78□□□□□ -2.28
SDHAF3Q9NRP4 Z94722.1-201ENST00000604328 474 ntBASIC0.78□□□□□ -2.28
SDHAF3Q9NRP4 AL359697.1-201ENST00000624879 587 ntBASIC0.78□□□□□ -2.28
SDHAF3Q9NRP4 Y_RNA.123-201ENST00000363338 102 ntBASIC0.77□□□□□ -2.29
SDHAF3Q9NRP4 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
SDHAF3Q9NRP4 RNU6-996P-201ENST00000365438 107 ntBASIC0.77□□□□□ -2.29
SDHAF3Q9NRP4 MIR487A-201ENST00000385009 80 ntBASIC0.77□□□□□ -2.29
SDHAF3Q9NRP4 RNA5SP323-201ENST00000391094 133 ntBASIC0.77□□□□□ -2.29
SDHAF3Q9NRP4 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.77□□□□□ -2.29
SDHAF3Q9NRP4 AL606490.4-201ENST00000423117 127 ntBASIC0.77□□□□□ -2.29
SDHAF3Q9NRP4 AC005002.2-201ENST00000438228 269 ntBASIC0.77□□□□□ -2.29
SDHAF3Q9NRP4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.77□□□□□ -2.29
SDHAF3Q9NRP4 RNU7-63P-201ENST00000459054 62 ntBASIC0.77□□□□□ -2.29
SDHAF3Q9NRP4 RNU7-57P-201ENST00000459540 60 ntBASIC0.77□□□□□ -2.29
SDHAF3Q9NRP4 AC007215.1-201ENST00000464893 276 ntBASIC0.77□□□□□ -2.29
SDHAF3Q9NRP4 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.77□□□□□ -2.29
SDHAF3Q9NRP4 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.77□□□□□ -2.29
SDHAF3Q9NRP4 AC136628.3-201ENST00000521868 290 ntBASIC0.77□□□□□ -2.29
SDHAF3Q9NRP4 MTND4P7-201ENST00000523876 130 ntBASIC0.77□□□□□ -2.29
SDHAF3Q9NRP4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.77□□□□□ -2.29
SDHAF3Q9NRP4 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.77□□□□□ -2.29
SDHAF3Q9NRP4 AC072046.2-201ENST00000618366 268 ntBASIC0.77□□□□□ -2.29
SDHAF3Q9NRP4 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.77□□□□□ -2.29
SDHAF3Q9NRP4 AC008163.1-202ENST00000636004 2889 ntBASIC0.76□□□□□ -2.29
SDHAF3Q9NRP4 OR4G1P-203ENST00000641984 1631 ntBASIC0.76□□□□□ -2.29
SDHAF3Q9NRP4 MIR96-201ENST00000362288 78 ntBASIC0.76□□□□□ -2.29
SDHAF3Q9NRP4 Y_RNA.191-201ENST00000363972 113 ntBASIC0.76□□□□□ -2.29
SDHAF3Q9NRP4 RNU1-93P-201ENST00000364704 169 ntBASIC0.76□□□□□ -2.29
SDHAF3Q9NRP4 MIR450B-201ENST00000401182 78 ntBASIC0.76□□□□□ -2.29
SDHAF3Q9NRP4 MIR1253-201ENST00000408273 105 ntBASIC0.76□□□□□ -2.29
SDHAF3Q9NRP4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.76□□□□□ -2.29
SDHAF3Q9NRP4 RAB28P5-201ENST00000427490 651 ntBASIC0.76□□□□□ -2.29
SDHAF3Q9NRP4 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.76□□□□□ -2.29
SDHAF3Q9NRP4 RN7SKP49-201ENST00000516675 260 ntBASIC0.76□□□□□ -2.29
SDHAF3Q9NRP4 AC025647.1-201ENST00000517879 253 ntBASIC0.76□□□□□ -2.29
SDHAF3Q9NRP4 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.76□□□□□ -2.29
SDHAF3Q9NRP4 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.76□□□□□ -2.29
SDHAF3Q9NRP4 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.76□□□□□ -2.29
SDHAF3Q9NRP4 FAM71BP1-201ENST00000604431 523 ntBASIC0.76□□□□□ -2.29
SDHAF3Q9NRP4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.76□□□□□ -2.29
SDHAF3Q9NRP4 SCARNA4-201ENST00000629045 128 ntBASIC0.76□□□□□ -2.29
SDHAF3Q9NRP4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.76□□□□□ -2.29
SDHAF3Q9NRP4 MTND4P5-201ENST00000435821 1374 ntBASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 Y_RNA.381-201ENST00000365666 102 ntBASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 RNU6-505P-201ENST00000384427 107 ntBASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 MIR19B1-201ENST00000384829 87 ntBASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 MIR100-201ENST00000385259 80 ntBASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 RNU6-1158P-201ENST00000391167 107 ntBASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 RNA5SP504-201ENST00000410676 117 ntBASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 AC006461.1-201ENST00000412637 326 ntBASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 RNU6-351P-201ENST00000516097 100 ntBASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 Y_RNA.676-201ENST00000516393 96 ntBASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 SNORA70.22-201ENST00000517160 124 ntBASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 RNU7-128P-201ENST00000517247 62 ntBASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 MTCO2P4-201ENST00000517968 247 ntBASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 AC025423.5-201ENST00000550230 219 ntBASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 SCOCP1-201ENST00000554676 349 ntBASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 MIR4698-201ENST00000577795 80 ntBASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 AC040904.1-201ENST00000590850 223 ntBASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 AC146944.4-201ENST00000602697 718 ntBASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 MIR8054-201ENST00000620877 86 ntBASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 AC008873.1-201ENST00000625051 138 ntBASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 AC005609.4-201ENST00000625071 447 ntBASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 snoZ196.1-201ENST00000625269 89 ntBASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 FER-210ENST00000628534 558 ntTSL 5 BASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 OR5AK4P-201ENST00000635912 903 ntBASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
SDHAF3Q9NRP4 RNU6-1329P-201ENST00000365664 107 ntBASIC0.74□□□□□ -2.29
SDHAF3Q9NRP4 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.74□□□□□ -2.29
SDHAF3Q9NRP4 MIR499A-201ENST00000384903 122 ntBASIC0.74□□□□□ -2.29
SDHAF3Q9NRP4 AL606923.1-201ENST00000406616 190 ntBASIC0.74□□□□□ -2.29
SDHAF3Q9NRP4 AL663109.1-201ENST00000411498 844 ntBASIC0.74□□□□□ -2.29
SDHAF3Q9NRP4 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.74□□□□□ -2.29
SDHAF3Q9NRP4 MTND1P27-201ENST00000451117 902 ntBASIC0.74□□□□□ -2.29
SDHAF3Q9NRP4 MTCO2P18-201ENST00000457151 658 ntBASIC0.74□□□□□ -2.29
SDHAF3Q9NRP4 U8.21-201ENST00000459536 136 ntBASIC0.74□□□□□ -2.29
SDHAF3Q9NRP4 AC048334.1-201ENST00000477975 159 ntBASIC0.74□□□□□ -2.29
SDHAF3Q9NRP4 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC0.74□□□□□ -2.29
SDHAF3Q9NRP4 SNORA31.2-201ENST00000516019 134 ntBASIC0.74□□□□□ -2.29
SDHAF3Q9NRP4 RNU6-189P-201ENST00000516120 101 ntBASIC0.74□□□□□ -2.29
SDHAF3Q9NRP4 RNU6-1038P-201ENST00000516516 104 ntBASIC0.74□□□□□ -2.29
SDHAF3Q9NRP4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.74□□□□□ -2.29
SDHAF3Q9NRP4 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.74□□□□□ -2.29
SDHAF3Q9NRP4 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
SDHAF3Q9NRP4 AL118558.2-201ENST00000556294 238 ntBASIC0.74□□□□□ -2.29
SDHAF3Q9NRP4 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 188.5 ms