Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
PDLIM7Q9NR12 RNU1-62P-201ENST00000362599 164 ntBASIC3.42□□□□□ -1.86
PDLIM7Q9NR12 RNU6-529P-201ENST00000363383 104 ntBASIC3.42□□□□□ -1.86
PDLIM7Q9NR12 Y_RNA.398-201ENST00000383952 99 ntBASIC3.42□□□□□ -1.86
PDLIM7Q9NR12 RNU6-1310P-201ENST00000384153 107 ntBASIC3.42□□□□□ -1.86
PDLIM7Q9NR12 RNU6-19P-201ENST00000384718 107 ntBASIC3.42□□□□□ -1.86
PDLIM7Q9NR12 RNU2-54P-201ENST00000410299 190 ntBASIC3.42□□□□□ -1.86
PDLIM7Q9NR12 RNU2-49P-201ENST00000410666 184 ntBASIC3.42□□□□□ -1.86
PDLIM7Q9NR12 RNU6-1135P-201ENST00000411083 103 ntBASIC3.42□□□□□ -1.86
PDLIM7Q9NR12 CYCSP48-201ENST00000417124 323 ntBASIC3.42□□□□□ -1.86
PDLIM7Q9NR12 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.42□□□□□ -1.86
PDLIM7Q9NR12 RPS29P12-201ENST00000460178 152 ntBASIC3.42□□□□□ -1.86
PDLIM7Q9NR12 TRAPPC2P7-201ENST00000509650 231 ntBASIC3.42□□□□□ -1.86
PDLIM7Q9NR12 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.42□□□□□ -1.86
PDLIM7Q9NR12 AC004832.4-201ENST00000608952 331 ntBASIC3.42□□□□□ -1.86
PDLIM7Q9NR12 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.42□□□□□ -1.86
PDLIM7Q9NR12 AC110079.1-202ENST00000635213 138 ntBASIC3.42□□□□□ -1.86
PDLIM7Q9NR12 MIR3674-201ENST00000636576 68 ntBASIC3.42□□□□□ -1.86
PDLIM7Q9NR12 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
PDLIM7Q9NR12 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
PDLIM7Q9NR12 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
PDLIM7Q9NR12 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.41□□□□□ -1.86
PDLIM7Q9NR12 AC073325.2-201ENST00000339545 159 ntBASIC3.41□□□□□ -1.86
PDLIM7Q9NR12 Y_RNA.291-201ENST00000364886 113 ntBASIC3.41□□□□□ -1.86
PDLIM7Q9NR12 SNORA18.3-201ENST00000384122 132 ntBASIC3.41□□□□□ -1.86
PDLIM7Q9NR12 MIR613-201ENST00000385248 95 ntBASIC3.41□□□□□ -1.86
PDLIM7Q9NR12 MIR320B2-201ENST00000408479 138 ntBASIC3.41□□□□□ -1.86
PDLIM7Q9NR12 AC009963.1-201ENST00000417265 157 ntBASIC3.41□□□□□ -1.86
PDLIM7Q9NR12 AL121890.1-201ENST00000435457 205 ntBASIC3.41□□□□□ -1.86
PDLIM7Q9NR12 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.41□□□□□ -1.86
PDLIM7Q9NR12 AL109933.2-201ENST00000452651 260 ntBASIC3.41□□□□□ -1.86
PDLIM7Q9NR12 AC006539.3-201ENST00000454258 129 ntBASIC3.41□□□□□ -1.86
PDLIM7Q9NR12 AL441985.1-201ENST00000457727 251 ntBASIC3.41□□□□□ -1.86
PDLIM7Q9NR12 RN7SL442P-201ENST00000473804 320 ntBASIC3.41□□□□□ -1.86
PDLIM7Q9NR12 RPS27P26-201ENST00000494583 239 ntBASIC3.41□□□□□ -1.86
PDLIM7Q9NR12 HMGB3P3-201ENST00000510526 400 ntBASIC3.41□□□□□ -1.86
PDLIM7Q9NR12 AC091544.4-201ENST00000555268 342 ntBASIC3.41□□□□□ -1.86
PDLIM7Q9NR12 SNRPGP20-201ENST00000604477 205 ntBASIC3.41□□□□□ -1.86
PDLIM7Q9NR12 AL034555.1-201ENST00000604816 211 ntBASIC3.41□□□□□ -1.86
PDLIM7Q9NR12 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.41□□□□□ -1.86
PDLIM7Q9NR12 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM7Q9NR12 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDLIM7Q9NR12 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.41□□□□□ -1.86
PDLIM7Q9NR12 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PDLIM7Q9NR12 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
PDLIM7Q9NR12 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
PDLIM7Q9NR12 MIR22-201ENST00000362190 85 ntBASIC3.4□□□□□ -1.87
PDLIM7Q9NR12 Y_RNA.40-201ENST00000362645 93 ntBASIC3.4□□□□□ -1.87
PDLIM7Q9NR12 RNU6-653P-201ENST00000363074 106 ntBASIC3.4□□□□□ -1.87
PDLIM7Q9NR12 RNU6-704P-201ENST00000364162 103 ntBASIC3.4□□□□□ -1.87
PDLIM7Q9NR12 SNORD113-1-201ENST00000365321 69 ntBASIC3.4□□□□□ -1.87
PDLIM7Q9NR12 RNU6-748P-201ENST00000384648 107 ntBASIC3.4□□□□□ -1.87
PDLIM7Q9NR12 SNORD67-201ENST00000390833 111 ntBASIC3.4□□□□□ -1.87
PDLIM7Q9NR12 RNU6-750P-201ENST00000390946 107 ntBASIC3.4□□□□□ -1.87
PDLIM7Q9NR12 AL357139.1-201ENST00000407792 426 ntBASIC3.4□□□□□ -1.87
PDLIM7Q9NR12 RNA5SP475-201ENST00000410568 110 ntBASIC3.4□□□□□ -1.87
PDLIM7Q9NR12 BTF3P11-201ENST00000426582 477 ntBASIC3.4□□□□□ -1.87
PDLIM7Q9NR12 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.4□□□□□ -1.87
PDLIM7Q9NR12 MIR5692C2-201ENST00000577959 77 ntBASIC3.4□□□□□ -1.87
PDLIM7Q9NR12 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.4□□□□□ -1.87
PDLIM7Q9NR12 RPS15AP11-201ENST00000594193 385 ntBASIC3.4□□□□□ -1.87
PDLIM7Q9NR12 AL008718.3-201ENST00000610217 321 ntBASIC3.4□□□□□ -1.87
PDLIM7Q9NR12 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.4□□□□□ -1.87
PDLIM7Q9NR12 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.4□□□□□ -1.87
PDLIM7Q9NR12 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.4□□□□□ -1.87
PDLIM7Q9NR12 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.39□□□□□ -1.87
PDLIM7Q9NR12 RNU6-1272P-201ENST00000362776 107 ntBASIC3.39□□□□□ -1.87
PDLIM7Q9NR12 SNORD56.3-201ENST00000363507 71 ntBASIC3.39□□□□□ -1.87
PDLIM7Q9NR12 Y_RNA.415-201ENST00000384012 112 ntBASIC3.39□□□□□ -1.87
PDLIM7Q9NR12 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.39□□□□□ -1.87
PDLIM7Q9NR12 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.39□□□□□ -1.87
PDLIM7Q9NR12 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.39□□□□□ -1.87
PDLIM7Q9NR12 RNA5SP217-201ENST00000515959 91 ntBASIC3.39□□□□□ -1.87
PDLIM7Q9NR12 SNORA64.4-201ENST00000516632 81 ntBASIC3.39□□□□□ -1.87
PDLIM7Q9NR12 SNORA50A-202ENST00000629536 136 ntBASIC3.39□□□□□ -1.87
PDLIM7Q9NR12 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.39□□□□□ -1.87
PDLIM7Q9NR12 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.39□□□□□ -1.87
PDLIM7Q9NR12 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.39□□□□□ -1.87
PDLIM7Q9NR12 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PDLIM7Q9NR12 Y_RNA.329-201ENST00000365209 107 ntBASIC3.38□□□□□ -1.87
PDLIM7Q9NR12 RN7SL20P-201ENST00000488827 297 ntBASIC3.38□□□□□ -1.87
PDLIM7Q9NR12 RAC1P5-201ENST00000512182 576 ntBASIC3.38□□□□□ -1.87
PDLIM7Q9NR12 RNU6-107P-201ENST00000516643 102 ntBASIC3.38□□□□□ -1.87
PDLIM7Q9NR12 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.38□□□□□ -1.87
PDLIM7Q9NR12 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.38□□□□□ -1.87
PDLIM7Q9NR12 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.38□□□□□ -1.87
PDLIM7Q9NR12 MIR3186-201ENST00000577404 85 ntBASIC3.38□□□□□ -1.87
PDLIM7Q9NR12 PCGEM1.1-201ENST00000613431 131 ntBASIC3.38□□□□□ -1.87
PDLIM7Q9NR12 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PDLIM7Q9NR12 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
PDLIM7Q9NR12 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.37□□□□□ -1.87
PDLIM7Q9NR12 Y_RNA.441-201ENST00000384123 112 ntBASIC3.37□□□□□ -1.87
PDLIM7Q9NR12 Y_RNA.571-201ENST00000384753 98 ntBASIC3.37□□□□□ -1.87
PDLIM7Q9NR12 AL451074.5-201ENST00000415894 435 ntBASIC3.37□□□□□ -1.87
PDLIM7Q9NR12 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.37□□□□□ -1.87
PDLIM7Q9NR12 AC083906.5-201ENST00000503722 328 ntBASIC3.37□□□□□ -1.87
PDLIM7Q9NR12 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC3.37□□□□□ -1.87
PDLIM7Q9NR12 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.37□□□□□ -1.87
PDLIM7Q9NR12 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.37□□□□□ -1.87
PDLIM7Q9NR12 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 145.9 ms