Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.98□□□□□ -1.61
RTN4Q9NQC3 IGLVIV-65-201ENST00000517313 360 ntBASIC4.98□□□□□ -1.61
RTN4Q9NQC3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.98□□□□□ -1.61
RTN4Q9NQC3 AC044860.2-201ENST00000561005 179 ntBASIC4.98□□□□□ -1.61
RTN4Q9NQC3 RPL23AP91-201ENST00000569211 455 ntBASIC4.98□□□□□ -1.61
RTN4Q9NQC3 MIR548X2-201ENST00000579776 100 ntBASIC4.98□□□□□ -1.61
RTN4Q9NQC3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.98□□□□□ -1.61
RTN4Q9NQC3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RTN4Q9NQC3 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC4.97□□□□□ -1.61
RTN4Q9NQC3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
RTN4Q9NQC3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RTN4Q9NQC3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RTN4Q9NQC3 Y_RNA.111-201ENST00000363248 100 ntBASIC4.97□□□□□ -1.61
RTN4Q9NQC3 Y_RNA.521-201ENST00000384560 114 ntBASIC4.97□□□□□ -1.61
RTN4Q9NQC3 SNORA8-201ENST00000384574 139 ntBASIC4.97□□□□□ -1.61
RTN4Q9NQC3 RNA5SP467-201ENST00000391274 118 ntBASIC4.97□□□□□ -1.61
RTN4Q9NQC3 SPTLC1P2-201ENST00000407089 121 ntBASIC4.97□□□□□ -1.61
RTN4Q9NQC3 RPS26P45-201ENST00000471748 340 ntBASIC4.97□□□□□ -1.61
RTN4Q9NQC3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.97□□□□□ -1.61
RTN4Q9NQC3 RNA5SP137-201ENST00000516833 135 ntBASIC4.97□□□□□ -1.61
RTN4Q9NQC3 AC005786.1-201ENST00000588553 154 ntBASIC4.97□□□□□ -1.61
RTN4Q9NQC3 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
RTN4Q9NQC3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RTN4Q9NQC3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RTN4Q9NQC3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
RTN4Q9NQC3 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.61
RTN4Q9NQC3 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
RTN4Q9NQC3 RNA5SP153-201ENST00000516498 76 ntBASIC4.96□□□□□ -1.62
RTN4Q9NQC3 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.96□□□□□ -1.62
RTN4Q9NQC3 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.96□□□□□ -1.62
RTN4Q9NQC3 U3.53-201ENST00000628922 216 ntBASIC4.96□□□□□ -1.62
RTN4Q9NQC3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
RTN4Q9NQC3 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.96□□□□□ -1.62
RTN4Q9NQC3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RTN4Q9NQC3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RTN4Q9NQC3 AC125257.1-201ENST00000560400 2930 ntBASIC4.95□□□□□ -1.62
RTN4Q9NQC3 RNU1-58P-201ENST00000362413 163 ntBASIC4.95□□□□□ -1.62
RTN4Q9NQC3 SNORD45.3-201ENST00000363836 72 ntBASIC4.95□□□□□ -1.62
RTN4Q9NQC3 RNU7-128P-201ENST00000517247 62 ntBASIC4.95□□□□□ -1.62
RTN4Q9NQC3 AP002004.2-201ENST00000531656 154 ntBASIC4.95□□□□□ -1.62
RTN4Q9NQC3 AC091178.2-201ENST00000584401 117 ntBASIC4.95□□□□□ -1.62
RTN4Q9NQC3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.95□□□□□ -1.62
RTN4Q9NQC3 AL354798.1-201ENST00000622505 329 ntBASIC4.95□□□□□ -1.62
RTN4Q9NQC3 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
RTN4Q9NQC3 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RTN4Q9NQC3 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RTN4Q9NQC3 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
RTN4Q9NQC3 SNORA19-201ENST00000384737 128 ntBASIC4.94□□□□□ -1.62
RTN4Q9NQC3 SNORD37.2-201ENST00000391075 66 ntBASIC4.94□□□□□ -1.62
RTN4Q9NQC3 AL117342.1-201ENST00000404861 406 ntBASIC4.94□□□□□ -1.62
RTN4Q9NQC3 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.94□□□□□ -1.62
RTN4Q9NQC3 AC233266.1-201ENST00000454518 96 ntBASIC4.94□□□□□ -1.62
RTN4Q9NQC3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.94□□□□□ -1.62
RTN4Q9NQC3 SNORD116-25-201ENST00000516517 92 ntBASIC4.94□□□□□ -1.62
RTN4Q9NQC3 RNU6-197P-201ENST00000516680 100 ntBASIC4.94□□□□□ -1.62
RTN4Q9NQC3 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.94□□□□□ -1.62
RTN4Q9NQC3 MIR4443-201ENST00000585052 53 ntBASIC4.94□□□□□ -1.62
RTN4Q9NQC3 AC087685.1-201ENST00000587507 141 ntBASIC4.94□□□□□ -1.62
RTN4Q9NQC3 AC242852.1-201ENST00000612151 96 ntBASIC4.94□□□□□ -1.62
RTN4Q9NQC3 AC244015.1-201ENST00000622301 99 ntBASIC4.94□□□□□ -1.62
RTN4Q9NQC3 AC018445.2-201ENST00000622987 260 ntBASIC4.94□□□□□ -1.62
RTN4Q9NQC3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RTN4Q9NQC3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
RTN4Q9NQC3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
RTN4Q9NQC3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RTN4Q9NQC3 AC108206.1-201ENST00000570186 4159 ntBASIC4.93□□□□□ -1.62
RTN4Q9NQC3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
RTN4Q9NQC3 AL157777.2-201ENST00000258070 137 ntBASIC4.93□□□□□ -1.62
RTN4Q9NQC3 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RTN4Q9NQC3 Y_RNA.497-201ENST00000384447 98 ntBASIC4.93□□□□□ -1.62
RTN4Q9NQC3 Y_RNA.622-201ENST00000411091 108 ntBASIC4.93□□□□□ -1.62
RTN4Q9NQC3 RPL30P13-201ENST00000418873 348 ntBASIC4.93□□□□□ -1.62
RTN4Q9NQC3 AC016831.4-201ENST00000438302 307 ntBASIC4.93□□□□□ -1.62
RTN4Q9NQC3 AL049873.1-201ENST00000480540 376 ntBASIC4.93□□□□□ -1.62
RTN4Q9NQC3 HMGN1P7-201ENST00000491722 313 ntBASIC4.93□□□□□ -1.62
RTN4Q9NQC3 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.93□□□□□ -1.62
RTN4Q9NQC3 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.93□□□□□ -1.62
RTN4Q9NQC3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.93□□□□□ -1.62
RTN4Q9NQC3 AL049861.1-201ENST00000603130 150 ntBASIC4.93□□□□□ -1.62
RTN4Q9NQC3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.93□□□□□ -1.62
RTN4Q9NQC3 AC019176.2-201ENST00000611579 315 ntBASIC4.93□□□□□ -1.62
RTN4Q9NQC3 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC4.93□□□□□ -1.62
RTN4Q9NQC3 AC087385.3-201ENST00000620477 187 ntBASIC4.93□□□□□ -1.62
RTN4Q9NQC3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
RTN4Q9NQC3 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RTN4Q9NQC3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
RTN4Q9NQC3 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC4.92□□□□□ -1.62
RTN4Q9NQC3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RTN4Q9NQC3 RNU1-35P-201ENST00000362782 153 ntBASIC4.92□□□□□ -1.62
RTN4Q9NQC3 RNU6-1209P-201ENST00000363655 107 ntBASIC4.92□□□□□ -1.62
RTN4Q9NQC3 Y_RNA.796-201ENST00000364268 102 ntBASIC4.92□□□□□ -1.62
RTN4Q9NQC3 Y_RNA.799-201ENST00000364992 102 ntBASIC4.92□□□□□ -1.62
RTN4Q9NQC3 Y_RNA.393-201ENST00000383936 102 ntBASIC4.92□□□□□ -1.62
RTN4Q9NQC3 RPS16P5-201ENST00000406501 404 ntBASIC4.92□□□□□ -1.62
RTN4Q9NQC3 SNORA74C-2-201ENST00000411179 201 ntBASIC4.92□□□□□ -1.62
RTN4Q9NQC3 RPL37P18-201ENST00000411602 243 ntBASIC4.92□□□□□ -1.62
RTN4Q9NQC3 RPL23AP27-201ENST00000415161 451 ntBASIC4.92□□□□□ -1.62
RTN4Q9NQC3 OR9P1P-201ENST00000496431 281 ntBASIC4.92□□□□□ -1.62
RTN4Q9NQC3 SNORD77.4-201ENST00000516158 81 ntBASIC4.92□□□□□ -1.62
RTN4Q9NQC3 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 803.7 ms