Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 TRAPPC2P8-201ENST00000440676 396 ntBASIC3□□□□□ -1.93
VTA1Q9NP79 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3□□□□□ -1.93
VTA1Q9NP79 UQCRBP2-201ENST00000447827 297 ntBASIC3□□□□□ -1.93
VTA1Q9NP79 AC074290.1-201ENST00000448883 135 ntBASIC3□□□□□ -1.93
VTA1Q9NP79 MTATP8P1-201ENST00000467115 207 ntBASIC3□□□□□ -1.93
VTA1Q9NP79 AC091179.3-201ENST00000474761 144 ntBASIC3□□□□□ -1.93
VTA1Q9NP79 AC025465.3-201ENST00000510570 311 ntBASIC3□□□□□ -1.93
VTA1Q9NP79 AK6P2-201ENST00000549020 471 ntBASIC3□□□□□ -1.93
VTA1Q9NP79 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3□□□□□ -1.93
VTA1Q9NP79 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3□□□□□ -1.93
VTA1Q9NP79 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3□□□□□ -1.93
VTA1Q9NP79 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3□□□□□ -1.93
VTA1Q9NP79 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3□□□□□ -1.93
VTA1Q9NP79 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3□□□□□ -1.93
VTA1Q9NP79 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3□□□□□ -1.93
VTA1Q9NP79 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3□□□□□ -1.93
VTA1Q9NP79 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
VTA1Q9NP79 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3□□□□□ -1.93
VTA1Q9NP79 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
VTA1Q9NP79 MIR410-201ENST00000362222 80 ntBASIC2.99□□□□□ -1.93
VTA1Q9NP79 MIR181A2-201ENST00000384863 110 ntBASIC2.99□□□□□ -1.93
VTA1Q9NP79 SNORA12-201ENST00000391162 147 ntBASIC2.99□□□□□ -1.93
VTA1Q9NP79 AC090515.1-201ENST00000465295 476 ntBASIC2.99□□□□□ -1.93
VTA1Q9NP79 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.99□□□□□ -1.93
VTA1Q9NP79 SNORA9.3-201ENST00000516383 129 ntBASIC2.99□□□□□ -1.93
VTA1Q9NP79 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.99□□□□□ -1.93
VTA1Q9NP79 AL161670.1-201ENST00000554348 137 ntBASIC2.99□□□□□ -1.93
VTA1Q9NP79 AC004817.2-201ENST00000561794 651 ntBASIC2.99□□□□□ -1.93
VTA1Q9NP79 MZT1P2-201ENST00000604387 248 ntBASIC2.99□□□□□ -1.93
VTA1Q9NP79 AL355297.2-201ENST00000604792 129 ntBASIC2.99□□□□□ -1.93
VTA1Q9NP79 U4.1-201ENST00000620349 87 ntBASIC2.99□□□□□ -1.93
VTA1Q9NP79 AC008873.1-201ENST00000625051 138 ntBASIC2.99□□□□□ -1.93
VTA1Q9NP79 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
VTA1Q9NP79 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.98□□□□□ -1.93
VTA1Q9NP79 Y_RNA.19-201ENST00000362462 99 ntBASIC2.98□□□□□ -1.93
VTA1Q9NP79 RNU6-234P-201ENST00000365229 104 ntBASIC2.98□□□□□ -1.93
VTA1Q9NP79 Y_RNA.498-201ENST00000384460 102 ntBASIC2.98□□□□□ -1.93
VTA1Q9NP79 MIR586-201ENST00000385035 97 ntBASIC2.98□□□□□ -1.93
VTA1Q9NP79 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.98□□□□□ -1.93
VTA1Q9NP79 AC114982.1-201ENST00000469402 321 ntBASIC2.98□□□□□ -1.93
VTA1Q9NP79 RPL26P26-201ENST00000480251 434 ntBASIC2.98□□□□□ -1.93
VTA1Q9NP79 AP004217.1-201ENST00000480579 346 ntBASIC2.98□□□□□ -1.93
VTA1Q9NP79 RNY3P15-201ENST00000516297 97 ntBASIC2.98□□□□□ -1.93
VTA1Q9NP79 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.98□□□□□ -1.93
VTA1Q9NP79 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.98□□□□□ -1.93
VTA1Q9NP79 AC018448.1-201ENST00000552843 316 ntBASIC2.98□□□□□ -1.93
VTA1Q9NP79 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.98□□□□□ -1.93
VTA1Q9NP79 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.98□□□□□ -1.93
VTA1Q9NP79 AC107871.2-201ENST00000612894 502 ntBASIC2.98□□□□□ -1.93
VTA1Q9NP79 AL590808.1-201ENST00000618696 141 ntBASIC2.98□□□□□ -1.93
VTA1Q9NP79 AC108206.1-201ENST00000570186 4159 ntBASIC2.98□□□□□ -1.93
VTA1Q9NP79 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.98□□□□□ -1.93
VTA1Q9NP79 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.97□□□□□ -1.93
VTA1Q9NP79 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VTA1Q9NP79 U3.8-201ENST00000363675 217 ntBASIC2.97□□□□□ -1.93
VTA1Q9NP79 RNU6-944P-201ENST00000364023 107 ntBASIC2.97□□□□□ -1.93
VTA1Q9NP79 RNU6-1180P-201ENST00000364935 107 ntBASIC2.97□□□□□ -1.93
VTA1Q9NP79 Y_RNA.452-201ENST00000384202 108 ntBASIC2.97□□□□□ -1.93
VTA1Q9NP79 SNORD115-46-201ENST00000390982 71 ntBASIC2.97□□□□□ -1.93
VTA1Q9NP79 AL079342.1-201ENST00000401460 267 ntBASIC2.97□□□□□ -1.93
VTA1Q9NP79 AL033519.2-201ENST00000403958 392 ntBASIC2.97□□□□□ -1.93
VTA1Q9NP79 AL357139.1-201ENST00000407792 426 ntBASIC2.97□□□□□ -1.93
VTA1Q9NP79 RNU6-130P-201ENST00000411112 103 ntBASIC2.97□□□□□ -1.93
VTA1Q9NP79 ELOCP20-201ENST00000422460 345 ntBASIC2.97□□□□□ -1.93
VTA1Q9NP79 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.97□□□□□ -1.93
VTA1Q9NP79 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.97□□□□□ -1.93
VTA1Q9NP79 DEFB131C-201ENST00000528817 165 ntBASIC2.97□□□□□ -1.93
VTA1Q9NP79 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.97□□□□□ -1.93
VTA1Q9NP79 MIR3124-201ENST00000582636 67 ntBASIC2.97□□□□□ -1.93
VTA1Q9NP79 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.97□□□□□ -1.93
VTA1Q9NP79 MIR8062-201ENST00000621515 85 ntBASIC2.97□□□□□ -1.93
VTA1Q9NP79 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.93
VTA1Q9NP79 RNU6-1264P-201ENST00000383891 107 ntBASIC2.96□□□□□ -1.94
VTA1Q9NP79 RNU6-1026P-201ENST00000384465 108 ntBASIC2.96□□□□□ -1.94
VTA1Q9NP79 RNU2-32P-201ENST00000411193 191 ntBASIC2.96□□□□□ -1.94
VTA1Q9NP79 AL445305.1-201ENST00000432577 575 ntBASIC2.96□□□□□ -1.94
VTA1Q9NP79 RPS29P6-201ENST00000438196 145 ntBASIC2.96□□□□□ -1.94
VTA1Q9NP79 DYNLT3P2-201ENST00000442517 295 ntBASIC2.96□□□□□ -1.94
VTA1Q9NP79 RNU6-625P-201ENST00000459412 107 ntBASIC2.96□□□□□ -1.94
VTA1Q9NP79 RNU6-397P-201ENST00000516226 104 ntBASIC2.96□□□□□ -1.94
VTA1Q9NP79 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC2.96□□□□□ -1.94
VTA1Q9NP79 AC023824.2-201ENST00000566185 400 ntBASIC2.96□□□□□ -1.94
VTA1Q9NP79 MIR3684-201ENST00000579779 74 ntBASIC2.96□□□□□ -1.94
VTA1Q9NP79 MIR4423-201ENST00000580922 80 ntBASIC2.96□□□□□ -1.94
VTA1Q9NP79 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.96□□□□□ -1.94
VTA1Q9NP79 MIR376A1-201ENST00000616574 68 ntBASIC2.96□□□□□ -1.94
VTA1Q9NP79 CTSLP2-204ENST00000629029 392 ntBASIC2.96□□□□□ -1.94
VTA1Q9NP79 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
VTA1Q9NP79 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VTA1Q9NP79 RNU6-238P-201ENST00000363313 106 ntBASIC2.95□□□□□ -1.94
VTA1Q9NP79 Y_RNA.193-201ENST00000363979 102 ntBASIC2.95□□□□□ -1.94
VTA1Q9NP79 SNORD31B-201ENST00000364977 69 ntBASIC2.95□□□□□ -1.94
VTA1Q9NP79 RNU6-926P-201ENST00000384075 107 ntBASIC2.95□□□□□ -1.94
VTA1Q9NP79 SNORA67.2-201ENST00000384300 149 ntBASIC2.95□□□□□ -1.94
VTA1Q9NP79 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.95□□□□□ -1.94
VTA1Q9NP79 AC096920.1-201ENST00000423991 241 ntBASIC2.95□□□□□ -1.94
VTA1Q9NP79 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.95□□□□□ -1.94
VTA1Q9NP79 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.95□□□□□ -1.94
VTA1Q9NP79 LINC01399-202ENST00000458450 244 ntBASIC2.95□□□□□ -1.94
VTA1Q9NP79 RNU7-14P-201ENST00000459331 62 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms