Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC112204.1-201ENST00000502591 103 ntBASIC0.22□□□□□ -2.37
KIAA1549Q9HCM3 AC091951.3-201ENST00000504093 246 ntBASIC0.22□□□□□ -2.37
KIAA1549Q9HCM3 AC025465.4-201ENST00000513422 638 ntBASIC0.22□□□□□ -2.37
KIAA1549Q9HCM3 RNU6-410P-201ENST00000517006 107 ntBASIC0.22□□□□□ -2.37
KIAA1549Q9HCM3 AC004584.2-201ENST00000570407 410 ntBASIC0.22□□□□□ -2.37
KIAA1549Q9HCM3 AC091805.2-201ENST00000603848 235 ntBASIC0.22□□□□□ -2.37
KIAA1549Q9HCM3 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.22□□□□□ -2.37
KIAA1549Q9HCM3 AC009878.1-201ENST00000621819 340 ntBASIC0.22□□□□□ -2.37
KIAA1549Q9HCM3 snoZ196.1-201ENST00000625269 89 ntBASIC0.22□□□□□ -2.37
KIAA1549Q9HCM3 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.22□□□□□ -2.37
KIAA1549Q9HCM3 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 RNU1-76P-201ENST00000362903 159 ntBASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 RNU6-541P-201ENST00000384709 110 ntBASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 MIR660-201ENST00000385235 97 ntBASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 RNU6-440P-201ENST00000390882 105 ntBASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 RNU6-57P-201ENST00000411348 103 ntBASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 AC245047.8-201ENST00000456455 284 ntBASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 AC069113.1-201ENST00000517763 267 ntBASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 AC036111.3-201ENST00000526389 112 ntBASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 EIF1P4-201ENST00000572664 335 ntBASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 MIR4514-201ENST00000581410 57 ntBASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 AL353765.1-201ENST00000605514 183 ntBASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 AC100812.1-201ENST00000607622 580 ntBASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 Y_RNA.22-201ENST00000362492 102 ntBASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 RNU6-108P-201ENST00000365558 107 ntBASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 RNU6-945P-201ENST00000383947 107 ntBASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 RNU6-1242P-201ENST00000391052 103 ntBASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 SNORA75.2-201ENST00000391138 150 ntBASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 SNORA75.3-201ENST00000391231 150 ntBASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 AF228730.1-201ENST00000397972 663 ntBASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 AC012306.1-201ENST00000423267 114 ntBASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 EPS15P1-201ENST00000448836 336 ntBASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 U7.7-201ENST00000459276 60 ntBASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 RNU7-57P-201ENST00000459540 60 ntBASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 MTCO2P6-201ENST00000463134 685 ntBASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 AC080078.2-201ENST00000603766 501 ntBASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 AC064872.1-201ENST00000604823 1072 ntBASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.21□□□□□ -2.38
KIAA1549Q9HCM3 RNU4-76P-201ENST00000364509 141 ntBASIC0.2□□□□□ -2.38
KIAA1549Q9HCM3 RNA5SP504-201ENST00000410676 117 ntBASIC0.2□□□□□ -2.38
KIAA1549Q9HCM3 CETN4P-201ENST00000432407 469 ntBASIC0.2□□□□□ -2.38
KIAA1549Q9HCM3 MTATP6P16-201ENST00000434543 526 ntBASIC0.2□□□□□ -2.38
KIAA1549Q9HCM3 AC002429.1-201ENST00000437672 148 ntBASIC0.2□□□□□ -2.38
KIAA1549Q9HCM3 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.2□□□□□ -2.38
KIAA1549Q9HCM3 AC093019.1-201ENST00000443135 252 ntBASIC0.2□□□□□ -2.38
KIAA1549Q9HCM3 AL031274.1-201ENST00000450334 232 ntBASIC0.2□□□□□ -2.38
KIAA1549Q9HCM3 RNU7-21P-201ENST00000459430 62 ntBASIC0.2□□□□□ -2.38
KIAA1549Q9HCM3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.2□□□□□ -2.38
KIAA1549Q9HCM3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC0.2□□□□□ -2.38
KIAA1549Q9HCM3 AC018714.1-201ENST00000605028 208 ntBASIC0.2□□□□□ -2.38
KIAA1549Q9HCM3 RNU4-5P-201ENST00000607255 135 ntBASIC0.2□□□□□ -2.38
KIAA1549Q9HCM3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC0.2□□□□□ -2.38
KIAA1549Q9HCM3 AC134026.1-201ENST00000623249 2239 ntBASIC0.2□□□□□ -2.38
KIAA1549Q9HCM3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
KIAA1549Q9HCM3 MTND5P17-201ENST00000418405 1603 ntBASIC0.2□□□□□ -2.38
KIAA1549Q9HCM3 AC090625.1-201ENST00000357130 210 ntBASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 MIR103A2-201ENST00000362154 78 ntBASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 SNORA36.2-201ENST00000384004 127 ntBASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 RNA5SP109-201ENST00000391010 116 ntBASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 RNU6-550P-201ENST00000391057 101 ntBASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 MTND1P20-201ENST00000430341 950 ntBASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 GPR143P-201ENST00000434155 205 ntBASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 AL512286.1-201ENST00000439244 400 ntBASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 AC009237.7-201ENST00000447357 229 ntBASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 AC116562.3-201ENST00000506136 177 ntBASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 RNA5SP476-201ENST00000516613 103 ntBASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 AC068587.5-201ENST00000528506 175 ntBASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 AP001836.1-201ENST00000604675 523 ntBASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 AL139418.1-201ENST00000613613 177 ntBASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 AL109933.3-201ENST00000619095 188 ntBASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 RNU6-1335P-201ENST00000365426 107 ntBASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 RNU6-827P-201ENST00000365553 106 ntBASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 RNU6-393P-201ENST00000384475 107 ntBASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 RNU6-1093P-201ENST00000391194 107 ntBASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 AC244098.3-201ENST00000424803 96 ntBASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 AC009159.2-201ENST00000617603 606 ntBASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 AL607023.1-201ENST00000620045 248 ntBASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 OR5AK4P-201ENST00000635912 903 ntBASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 AC100810.6-201ENST00000638068 285 ntBASIC0.19□□□□□ -2.38
KIAA1549Q9HCM3 RNU5F-6P-201ENST00000362979 116 ntBASIC0.18□□□□□ -2.38
KIAA1549Q9HCM3 Y_RNA.124-201ENST00000363339 93 ntBASIC0.18□□□□□ -2.38
KIAA1549Q9HCM3 RNU6-1327P-201ENST00000365302 105 ntBASIC0.18□□□□□ -2.38
KIAA1549Q9HCM3 RNU6-163P-201ENST00000384396 106 ntBASIC0.18□□□□□ -2.38
KIAA1549Q9HCM3 AL117339.3-201ENST00000418733 162 ntBASIC0.18□□□□□ -2.38
KIAA1549Q9HCM3 MTCO2P23-201ENST00000425216 680 ntBASIC0.18□□□□□ -2.38
KIAA1549Q9HCM3 TIMM9P3-201ENST00000428659 274 ntBASIC0.18□□□□□ -2.38
KIAA1549Q9HCM3 RPEP5-201ENST00000441137 268 ntBASIC0.18□□□□□ -2.38
KIAA1549Q9HCM3 NFU1P2-201ENST00000448700 469 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms