Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 U6.115-201ENST00000636045 103 ntBASIC3.82□□□□□ -1.8
ZFYVE28Q9HCC9 U6.98-201ENST00000637157 84 ntBASIC3.82□□□□□ -1.8
ZFYVE28Q9HCC9 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC3.82□□□□□ -1.8
ZFYVE28Q9HCC9 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
ZFYVE28Q9HCC9 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
ZFYVE28Q9HCC9 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZFYVE28Q9HCC9 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.81□□□□□ -1.8
ZFYVE28Q9HCC9 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ZFYVE28Q9HCC9 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
ZFYVE28Q9HCC9 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
ZFYVE28Q9HCC9 MIR449A-201ENST00000362113 91 ntBASIC3.81□□□□□ -1.8
ZFYVE28Q9HCC9 SNORA12-201ENST00000391162 147 ntBASIC3.81□□□□□ -1.8
ZFYVE28Q9HCC9 SNORA26.5-201ENST00000391215 123 ntBASIC3.81□□□□□ -1.8
ZFYVE28Q9HCC9 RNA5SP354-201ENST00000391247 136 ntBASIC3.81□□□□□ -1.8
ZFYVE28Q9HCC9 MTATP6P29-201ENST00000415057 132 ntBASIC3.81□□□□□ -1.8
ZFYVE28Q9HCC9 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC3.81□□□□□ -1.8
ZFYVE28Q9HCC9 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.81□□□□□ -1.8
ZFYVE28Q9HCC9 AC021269.2-201ENST00000532318 330 ntBASIC3.81□□□□□ -1.8
ZFYVE28Q9HCC9 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.81□□□□□ -1.8
ZFYVE28Q9HCC9 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.81□□□□□ -1.8
ZFYVE28Q9HCC9 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.81□□□□□ -1.8
ZFYVE28Q9HCC9 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.81□□□□□ -1.8
ZFYVE28Q9HCC9 AC244205.2-202ENST00000635781 342 ntBASIC3.81□□□□□ -1.8
ZFYVE28Q9HCC9 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
ZFYVE28Q9HCC9 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.81□□□□□ -1.8
ZFYVE28Q9HCC9 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.81□□□□□ -1.8
ZFYVE28Q9HCC9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ZFYVE28Q9HCC9 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
ZFYVE28Q9HCC9 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ZFYVE28Q9HCC9 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
ZFYVE28Q9HCC9 RNU6-899P-201ENST00000363947 107 ntBASIC3.8□□□□□ -1.8
ZFYVE28Q9HCC9 RNU6-1305P-201ENST00000364353 104 ntBASIC3.8□□□□□ -1.8
ZFYVE28Q9HCC9 Y_RNA.293-201ENST00000364908 93 ntBASIC3.8□□□□□ -1.8
ZFYVE28Q9HCC9 MIR548B-201ENST00000385247 97 ntBASIC3.8□□□□□ -1.8
ZFYVE28Q9HCC9 RNU6-855P-201ENST00000410395 104 ntBASIC3.8□□□□□ -1.8
ZFYVE28Q9HCC9 AL159169.1-201ENST00000421119 127 ntBASIC3.8□□□□□ -1.8
ZFYVE28Q9HCC9 AL139281.1-201ENST00000422120 335 ntBASIC3.8□□□□□ -1.8
ZFYVE28Q9HCC9 EIF4EP4-201ENST00000424916 578 ntBASIC3.8□□□□□ -1.8
ZFYVE28Q9HCC9 AC006989.1-201ENST00000427212 131 ntBASIC3.8□□□□□ -1.8
ZFYVE28Q9HCC9 SEPT7P4-201ENST00000437076 306 ntBASIC3.8□□□□□ -1.8
ZFYVE28Q9HCC9 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.8□□□□□ -1.8
ZFYVE28Q9HCC9 RN7SKP164-201ENST00000516138 266 ntBASIC3.8□□□□□ -1.8
ZFYVE28Q9HCC9 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.8□□□□□ -1.8
ZFYVE28Q9HCC9 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.8□□□□□ -1.8
ZFYVE28Q9HCC9 AC104984.5-201ENST00000586878 94 ntBASIC3.8□□□□□ -1.8
ZFYVE28Q9HCC9 AC008873.1-201ENST00000625051 138 ntBASIC3.8□□□□□ -1.8
ZFYVE28Q9HCC9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
ZFYVE28Q9HCC9 AC134026.1-201ENST00000623249 2239 ntBASIC3.8□□□□□ -1.8
ZFYVE28Q9HCC9 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
ZFYVE28Q9HCC9 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.8□□□□□ -1.8
ZFYVE28Q9HCC9 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
ZFYVE28Q9HCC9 AC007256.1-201ENST00000392253 2765 ntBASIC3.8□□□□□ -1.8
ZFYVE28Q9HCC9 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ZFYVE28Q9HCC9 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
ZFYVE28Q9HCC9 RNU4-84P-201ENST00000364200 139 ntBASIC3.79□□□□□ -1.8
ZFYVE28Q9HCC9 Y_RNA.341-201ENST00000365341 102 ntBASIC3.79□□□□□ -1.8
ZFYVE28Q9HCC9 Y_RNA.368-201ENST00000365547 113 ntBASIC3.79□□□□□ -1.8
ZFYVE28Q9HCC9 Y_RNA.400-201ENST00000383963 111 ntBASIC3.79□□□□□ -1.8
ZFYVE28Q9HCC9 SNORA72.4-201ENST00000384174 132 ntBASIC3.79□□□□□ -1.8
ZFYVE28Q9HCC9 SNORA8.3-201ENST00000384679 139 ntBASIC3.79□□□□□ -1.8
ZFYVE28Q9HCC9 MIR586-201ENST00000385035 97 ntBASIC3.79□□□□□ -1.8
ZFYVE28Q9HCC9 MIR29B2-201ENST00000385055 81 ntBASIC3.79□□□□□ -1.8
ZFYVE28Q9HCC9 RNU6-381P-201ENST00000391259 108 ntBASIC3.79□□□□□ -1.8
ZFYVE28Q9HCC9 AL353705.1-201ENST00000433468 480 ntBASIC3.79□□□□□ -1.8
ZFYVE28Q9HCC9 AL135790.2-201ENST00000437701 267 ntBASIC3.79□□□□□ -1.8
ZFYVE28Q9HCC9 SNORA70.12-201ENST00000516084 153 ntBASIC3.79□□□□□ -1.8
ZFYVE28Q9HCC9 MIR3684-201ENST00000579779 74 ntBASIC3.79□□□□□ -1.8
ZFYVE28Q9HCC9 RPL30P11-203ENST00000598995 310 ntBASIC3.79□□□□□ -1.8
ZFYVE28Q9HCC9 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.79□□□□□ -1.8
ZFYVE28Q9HCC9 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.79□□□□□ -1.8
ZFYVE28Q9HCC9 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
ZFYVE28Q9HCC9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.79□□□□□ -1.8
ZFYVE28Q9HCC9 RNU6-103P-201ENST00000363686 107 ntBASIC3.78□□□□□ -1.8
ZFYVE28Q9HCC9 RNU6-275P-201ENST00000364910 107 ntBASIC3.78□□□□□ -1.8
ZFYVE28Q9HCC9 Y_RNA.456-201ENST00000384232 111 ntBASIC3.78□□□□□ -1.8
ZFYVE28Q9HCC9 Y_RNA.488-201ENST00000384403 102 ntBASIC3.78□□□□□ -1.8
ZFYVE28Q9HCC9 Y_RNA.497-201ENST00000384447 98 ntBASIC3.78□□□□□ -1.8
ZFYVE28Q9HCC9 EBAG9P1-201ENST00000418955 543 ntBASIC3.78□□□□□ -1.8
ZFYVE28Q9HCC9 AC146507.2-201ENST00000460608 476 ntBASIC3.78□□□□□ -1.8
ZFYVE28Q9HCC9 AC008885.1-201ENST00000514930 301 ntBASIC3.78□□□□□ -1.8
ZFYVE28Q9HCC9 AC026333.2-201ENST00000542164 106 ntBASIC3.78□□□□□ -1.8
ZFYVE28Q9HCC9 MIR4765-201ENST00000585007 77 ntBASIC3.78□□□□□ -1.8
ZFYVE28Q9HCC9 AC013412.1-201ENST00000610687 192 ntBASIC3.78□□□□□ -1.8
ZFYVE28Q9HCC9 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.78□□□□□ -1.8
ZFYVE28Q9HCC9 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
ZFYVE28Q9HCC9 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
ZFYVE28Q9HCC9 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
ZFYVE28Q9HCC9 SNORD32B-201ENST00000364460 84 ntBASIC3.77□□□□□ -1.81
ZFYVE28Q9HCC9 MIR626-201ENST00000385032 94 ntBASIC3.77□□□□□ -1.81
ZFYVE28Q9HCC9 AL355497.1-201ENST00000406262 551 ntBASIC3.77□□□□□ -1.81
ZFYVE28Q9HCC9 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
ZFYVE28Q9HCC9 RN7SL330P-201ENST00000469709 307 ntBASIC3.77□□□□□ -1.81
ZFYVE28Q9HCC9 RNU5F-4P-201ENST00000516581 114 ntBASIC3.77□□□□□ -1.81
ZFYVE28Q9HCC9 MIR4744-201ENST00000581563 82 ntBASIC3.77□□□□□ -1.81
ZFYVE28Q9HCC9 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.77□□□□□ -1.81
ZFYVE28Q9HCC9 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
ZFYVE28Q9HCC9 RNU6-1117P-201ENST00000384525 104 ntBASIC3.76□□□□□ -1.81
ZFYVE28Q9HCC9 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC3.76□□□□□ -1.81
ZFYVE28Q9HCC9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.76□□□□□ -1.81
ZFYVE28Q9HCC9 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms