Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 snoU13.30-201ENST00000458951 104 ntBASIC1.56□□□□□ -2.16
RPAP3Q9H6T3 HMGN2P26-201ENST00000463169 339 ntBASIC1.56□□□□□ -2.16
RPAP3Q9H6T3 AC004223.1-201ENST00000479840 271 ntBASIC1.56□□□□□ -2.16
RPAP3Q9H6T3 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.56□□□□□ -2.16
RPAP3Q9H6T3 MTND1P35-201ENST00000526739 508 ntBASIC1.56□□□□□ -2.16
RPAP3Q9H6T3 AC084364.2-201ENST00000546924 395 ntBASIC1.56□□□□□ -2.16
RPAP3Q9H6T3 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.56□□□□□ -2.16
RPAP3Q9H6T3 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.56□□□□□ -2.16
RPAP3Q9H6T3 AP001485.1-201ENST00000604799 199 ntBASIC1.56□□□□□ -2.16
RPAP3Q9H6T3 MIR6078-201ENST00000611069 100 ntBASIC1.56□□□□□ -2.16
RPAP3Q9H6T3 MIR8074-201ENST00000615081 81 ntBASIC1.56□□□□□ -2.16
RPAP3Q9H6T3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC1.56□□□□□ -2.16
RPAP3Q9H6T3 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.56□□□□□ -2.16
RPAP3Q9H6T3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.55□□□□□ -2.16
RPAP3Q9H6T3 Y_RNA.269-201ENST00000364685 89 ntBASIC1.55□□□□□ -2.16
RPAP3Q9H6T3 Y_RNA.554-201ENST00000384672 102 ntBASIC1.55□□□□□ -2.16
RPAP3Q9H6T3 MIR150-201ENST00000385048 84 ntBASIC1.55□□□□□ -2.16
RPAP3Q9H6T3 MIR1283-1-201ENST00000408494 87 ntBASIC1.55□□□□□ -2.16
RPAP3Q9H6T3 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.55□□□□□ -2.16
RPAP3Q9H6T3 RPL30P13-201ENST00000418873 348 ntBASIC1.55□□□□□ -2.16
RPAP3Q9H6T3 AL445305.1-201ENST00000432577 575 ntBASIC1.55□□□□□ -2.16
RPAP3Q9H6T3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.55□□□□□ -2.16
RPAP3Q9H6T3 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.55□□□□□ -2.16
RPAP3Q9H6T3 ATP5J2P3-201ENST00000451550 258 ntBASIC1.55□□□□□ -2.16
RPAP3Q9H6T3 OR2AQ1P-201ENST00000451972 200 ntBASIC1.55□□□□□ -2.16
RPAP3Q9H6T3 RNA5SP102-201ENST00000516865 106 ntBASIC1.55□□□□□ -2.16
RPAP3Q9H6T3 AP003033.1-201ENST00000527244 415 ntBASIC1.55□□□□□ -2.16
RPAP3Q9H6T3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.55□□□□□ -2.16
RPAP3Q9H6T3 AC012557.2-201ENST00000605919 418 ntBASIC1.55□□□□□ -2.16
RPAP3Q9H6T3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RPAP3Q9H6T3 MIR6504-201ENST00000613520 61 ntBASIC1.55□□□□□ -2.16
RPAP3Q9H6T3 AC015540.1-201ENST00000615828 501 ntBASIC1.55□□□□□ -2.16
RPAP3Q9H6T3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.55□□□□□ -2.16
RPAP3Q9H6T3 AC024614.3-201ENST00000637860 256 ntBASIC1.55□□□□□ -2.16
RPAP3Q9H6T3 AC027514.1-201ENST00000588561 1603 ntBASIC1.55□□□□□ -2.16
RPAP3Q9H6T3 Y_RNA.224-201ENST00000364308 111 ntBASIC1.54□□□□□ -2.16
RPAP3Q9H6T3 Y_RNA.355-201ENST00000365462 98 ntBASIC1.54□□□□□ -2.16
RPAP3Q9H6T3 RNU6-203P-201ENST00000384038 104 ntBASIC1.54□□□□□ -2.16
RPAP3Q9H6T3 Y_RNA.508-201ENST00000384502 114 ntBASIC1.54□□□□□ -2.16
RPAP3Q9H6T3 MIR300-201ENST00000401138 83 ntBASIC1.54□□□□□ -2.16
RPAP3Q9H6T3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.54□□□□□ -2.16
RPAP3Q9H6T3 AC060773.1-201ENST00000421698 310 ntBASIC1.54□□□□□ -2.16
RPAP3Q9H6T3 MTND3P21-201ENST00000433774 331 ntBASIC1.54□□□□□ -2.16
RPAP3Q9H6T3 MTND1P11-201ENST00000456661 876 ntBASIC1.54□□□□□ -2.16
RPAP3Q9H6T3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.54□□□□□ -2.16
RPAP3Q9H6T3 RNU7-66P-201ENST00000459469 62 ntBASIC1.54□□□□□ -2.16
RPAP3Q9H6T3 AC087477.1-201ENST00000465747 340 ntBASIC1.54□□□□□ -2.16
RPAP3Q9H6T3 RPL23AP75-201ENST00000491601 451 ntBASIC1.54□□□□□ -2.16
RPAP3Q9H6T3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.54□□□□□ -2.16
RPAP3Q9H6T3 RNU6-273P-201ENST00000516937 96 ntBASIC1.54□□□□□ -2.16
RPAP3Q9H6T3 AC016957.1-201ENST00000534895 309 ntBASIC1.54□□□□□ -2.16
RPAP3Q9H6T3 RRN3P3-201ENST00000549207 578 ntBASIC1.54□□□□□ -2.16
RPAP3Q9H6T3 AC026470.2-201ENST00000561492 181 ntBASIC1.54□□□□□ -2.16
RPAP3Q9H6T3 TCL6_2.1-201ENST00000615162 119 ntBASIC1.54□□□□□ -2.16
RPAP3Q9H6T3 AC126177.8-201ENST00000618339 1015 ntBASIC1.54□□□□□ -2.16
RPAP3Q9H6T3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.53□□□□□ -2.16
RPAP3Q9H6T3 SNORD50.1-201ENST00000362987 71 ntBASIC1.53□□□□□ -2.16
RPAP3Q9H6T3 Y_RNA.116-201ENST00000363292 103 ntBASIC1.53□□□□□ -2.16
RPAP3Q9H6T3 Y_RNA.318-201ENST00000365131 97 ntBASIC1.53□□□□□ -2.16
RPAP3Q9H6T3 RNU6-296P-201ENST00000384608 107 ntBASIC1.53□□□□□ -2.16
RPAP3Q9H6T3 RNU6-95P-201ENST00000384697 107 ntBASIC1.53□□□□□ -2.16
RPAP3Q9H6T3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
RPAP3Q9H6T3 SNORA40.6-201ENST00000391153 128 ntBASIC1.53□□□□□ -2.16
RPAP3Q9H6T3 MTCO3P18-201ENST00000440206 761 ntBASIC1.53□□□□□ -2.16
RPAP3Q9H6T3 AC007215.1-201ENST00000464893 276 ntBASIC1.53□□□□□ -2.16
RPAP3Q9H6T3 AC105313.1-201ENST00000509121 353 ntBASIC1.53□□□□□ -2.16
RPAP3Q9H6T3 AC067942.3-201ENST00000512025 362 ntBASIC1.53□□□□□ -2.16
RPAP3Q9H6T3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.53□□□□□ -2.16
RPAP3Q9H6T3 MTND5P35-201ENST00000557537 1720 ntBASIC1.53□□□□□ -2.16
RPAP3Q9H6T3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.53□□□□□ -2.16
RPAP3Q9H6T3 MIR3672-201ENST00000584290 82 ntBASIC1.53□□□□□ -2.16
RPAP3Q9H6T3 MIR3660-201ENST00000584845 100 ntBASIC1.53□□□□□ -2.16
RPAP3Q9H6T3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.53□□□□□ -2.17
RPAP3Q9H6T3 RNU1-96P-201ENST00000364163 162 ntBASIC1.52□□□□□ -2.17
RPAP3Q9H6T3 Y_RNA.530-201ENST00000384587 101 ntBASIC1.52□□□□□ -2.17
RPAP3Q9H6T3 RNU1-78P-201ENST00000391248 165 ntBASIC1.52□□□□□ -2.17
RPAP3Q9H6T3 MTCO1P21-201ENST00000416634 589 ntBASIC1.52□□□□□ -2.17
RPAP3Q9H6T3 AC007098.1-201ENST00000420122 367 ntBASIC1.52□□□□□ -2.17
RPAP3Q9H6T3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.52□□□□□ -2.17
RPAP3Q9H6T3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.52□□□□□ -2.17
RPAP3Q9H6T3 Z82188.1-201ENST00000436709 154 ntBASIC1.52□□□□□ -2.17
RPAP3Q9H6T3 AL353572.1-201ENST00000442490 417 ntBASIC1.52□□□□□ -2.17
RPAP3Q9H6T3 snoU13.9-201ENST00000458927 103 ntBASIC1.52□□□□□ -2.17
RPAP3Q9H6T3 RPL36AP21-201ENST00000490372 323 ntBASIC1.52□□□□□ -2.17
RPAP3Q9H6T3 RNA5SP384-201ENST00000516615 116 ntBASIC1.52□□□□□ -2.17
RPAP3Q9H6T3 RNU6-856P-201ENST00000516959 98 ntBASIC1.52□□□□□ -2.17
RPAP3Q9H6T3 MIR4753-201ENST00000585119 83 ntBASIC1.52□□□□□ -2.17
RPAP3Q9H6T3 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.52□□□□□ -2.17
RPAP3Q9H6T3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.52□□□□□ -2.17
RPAP3Q9H6T3 AC093783.1-201ENST00000612976 329 ntBASIC1.52□□□□□ -2.17
RPAP3Q9H6T3 AL138726.1-201ENST00000614873 333 ntBASIC1.52□□□□□ -2.17
RPAP3Q9H6T3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.52□□□□□ -2.17
RPAP3Q9H6T3 ZNF204P-201ENST00000416749 2397 ntBASIC1.52□□□□□ -2.17
RPAP3Q9H6T3 RNU6-1305P-201ENST00000364353 104 ntBASIC1.51□□□□□ -2.17
RPAP3Q9H6T3 SNORD26-201ENST00000384147 75 ntBASIC1.51□□□□□ -2.17
RPAP3Q9H6T3 MIR181A1-201ENST00000385026 110 ntBASIC1.51□□□□□ -2.17
RPAP3Q9H6T3 RNU2-7P-201ENST00000410794 178 ntBASIC1.51□□□□□ -2.17
RPAP3Q9H6T3 AC245047.4-201ENST00000433189 144 ntBASIC1.51□□□□□ -2.17
RPAP3Q9H6T3 AC009237.7-201ENST00000447357 229 ntBASIC1.51□□□□□ -2.17
RPAP3Q9H6T3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms