Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AC023141.4-201ENST00000412031 328 ntBASIC2.65□□□□□ -1.99
EBF3Q9H4W6 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.65□□□□□ -1.99
EBF3Q9H4W6 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.65□□□□□ -1.99
EBF3Q9H4W6 AC007969.2-201ENST00000441891 191 ntBASIC2.65□□□□□ -1.99
EBF3Q9H4W6 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.65□□□□□ -1.99
EBF3Q9H4W6 AL353705.4-201ENST00000449661 238 ntBASIC2.65□□□□□ -1.99
EBF3Q9H4W6 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.65□□□□□ -1.99
EBF3Q9H4W6 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.65□□□□□ -1.99
EBF3Q9H4W6 RNU1-41P-201ENST00000516161 162 ntBASIC2.65□□□□□ -1.99
EBF3Q9H4W6 RNU6-581P-201ENST00000516214 105 ntBASIC2.65□□□□□ -1.99
EBF3Q9H4W6 RNU1-48P-201ENST00000516400 162 ntBASIC2.65□□□□□ -1.99
EBF3Q9H4W6 RNU6-861P-201ENST00000516745 106 ntBASIC2.65□□□□□ -1.99
EBF3Q9H4W6 SNORD19.2-201ENST00000516978 73 ntBASIC2.65□□□□□ -1.99
EBF3Q9H4W6 AP002392.1-201ENST00000537692 208 ntBASIC2.65□□□□□ -1.99
EBF3Q9H4W6 AC009163.5-201ENST00000575421 637 ntBASIC2.65□□□□□ -1.99
EBF3Q9H4W6 MIR4423-201ENST00000580922 80 ntBASIC2.65□□□□□ -1.99
EBF3Q9H4W6 AC019159.1-201ENST00000605094 187 ntBASIC2.65□□□□□ -1.99
EBF3Q9H4W6 AC024581.2-201ENST00000619986 252 ntBASIC2.65□□□□□ -1.99
EBF3Q9H4W6 CTSLP2-204ENST00000629029 392 ntBASIC2.65□□□□□ -1.99
EBF3Q9H4W6 MIR3529-201ENST00000637713 78 ntBASIC2.65□□□□□ -1.99
EBF3Q9H4W6 AC138915.1-201ENST00000565427 1685 ntBASIC2.65□□□□□ -1.99
EBF3Q9H4W6 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
EBF3Q9H4W6 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.65□□□□□ -1.99
EBF3Q9H4W6 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
EBF3Q9H4W6 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
EBF3Q9H4W6 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
EBF3Q9H4W6 MIR6073-201ENST00000352083 89 ntBASIC2.64□□□□□ -1.99
EBF3Q9H4W6 Y_RNA.44-201ENST00000362676 108 ntBASIC2.64□□□□□ -1.99
EBF3Q9H4W6 RNU4-90P-201ENST00000362773 141 ntBASIC2.64□□□□□ -1.99
EBF3Q9H4W6 RNU6-1159P-201ENST00000362933 107 ntBASIC2.64□□□□□ -1.99
EBF3Q9H4W6 SNORD115-32-201ENST00000364079 82 ntBASIC2.64□□□□□ -1.99
EBF3Q9H4W6 RNA5SP139-201ENST00000364340 117 ntBASIC2.64□□□□□ -1.99
EBF3Q9H4W6 RNU6-487P-201ENST00000365430 104 ntBASIC2.64□□□□□ -1.99
EBF3Q9H4W6 U8.10-201ENST00000384260 133 ntBASIC2.64□□□□□ -1.99
EBF3Q9H4W6 RNU6-843P-201ENST00000384454 104 ntBASIC2.64□□□□□ -1.99
EBF3Q9H4W6 MIR27B-201ENST00000385129 97 ntBASIC2.64□□□□□ -1.99
EBF3Q9H4W6 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
EBF3Q9H4W6 RNU1-139P-201ENST00000391307 165 ntBASIC2.64□□□□□ -1.99
EBF3Q9H4W6 RNA5SP181-201ENST00000410246 98 ntBASIC2.64□□□□□ -1.99
EBF3Q9H4W6 RNU6-1245P-201ENST00000411130 106 ntBASIC2.64□□□□□ -1.99
EBF3Q9H4W6 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.64□□□□□ -1.99
EBF3Q9H4W6 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.64□□□□□ -1.99
EBF3Q9H4W6 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.64□□□□□ -1.99
EBF3Q9H4W6 RPS15AP7-201ENST00000439294 405 ntBASIC2.64□□□□□ -1.99
EBF3Q9H4W6 Z96811.1-201ENST00000445880 108 ntBASIC2.64□□□□□ -1.99
EBF3Q9H4W6 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.64□□□□□ -1.99
EBF3Q9H4W6 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.64□□□□□ -1.99
EBF3Q9H4W6 RPS29P12-201ENST00000460178 152 ntBASIC2.64□□□□□ -1.99
EBF3Q9H4W6 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.64□□□□□ -1.99
EBF3Q9H4W6 SNORA31.23-201ENST00000517219 133 ntBASIC2.64□□□□□ -1.99
EBF3Q9H4W6 AC027288.2-201ENST00000553028 243 ntBASIC2.64□□□□□ -1.99
EBF3Q9H4W6 UBL5P4-201ENST00000562584 236 ntBASIC2.64□□□□□ -1.99
EBF3Q9H4W6 AL590240.4-201ENST00000616908 390 ntBASIC2.64□□□□□ -1.99
EBF3Q9H4W6 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.64□□□□□ -1.99
EBF3Q9H4W6 U4.3-201ENST00000621047 82 ntBASIC2.64□□□□□ -1.99
EBF3Q9H4W6 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.64□□□□□ -1.99
EBF3Q9H4W6 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
EBF3Q9H4W6 RNU5B-2P-201ENST00000363036 113 ntBASIC2.63□□□□□ -1.99
EBF3Q9H4W6 VTRNA1-1-201ENST00000363120 99 ntBASIC2.63□□□□□ -1.99
EBF3Q9H4W6 Y_RNA.122-201ENST00000363331 96 ntBASIC2.63□□□□□ -1.99
EBF3Q9H4W6 RNU6-879P-201ENST00000364328 108 ntBASIC2.63□□□□□ -1.99
EBF3Q9H4W6 Y_RNA.446-201ENST00000384178 104 ntBASIC2.63□□□□□ -1.99
EBF3Q9H4W6 SNORA29-201ENST00000384183 140 ntBASIC2.63□□□□□ -1.99
EBF3Q9H4W6 MIR10B-201ENST00000385011 110 ntBASIC2.63□□□□□ -1.99
EBF3Q9H4W6 SNORD12B-201ENST00000410433 91 ntBASIC2.63□□□□□ -1.99
EBF3Q9H4W6 RPL23AP95-201ENST00000426806 265 ntBASIC2.63□□□□□ -1.99
EBF3Q9H4W6 RPS15AP5-201ENST00000436276 388 ntBASIC2.63□□□□□ -1.99
EBF3Q9H4W6 AL161651.1-201ENST00000440882 223 ntBASIC2.63□□□□□ -1.99
EBF3Q9H4W6 AC087477.1-201ENST00000465747 340 ntBASIC2.63□□□□□ -1.99
EBF3Q9H4W6 SNORA31.15-201ENST00000516771 132 ntBASIC2.63□□□□□ -1.99
EBF3Q9H4W6 Y_RNA.703-201ENST00000516846 111 ntBASIC2.63□□□□□ -1.99
EBF3Q9H4W6 ACA59.2-201ENST00000517061 156 ntBASIC2.63□□□□□ -1.99
EBF3Q9H4W6 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.63□□□□□ -1.99
EBF3Q9H4W6 CKS1BP7-201ENST00000522230 235 ntBASIC2.63□□□□□ -1.99
EBF3Q9H4W6 RMST_6.1-201ENST00000611980 203 ntBASIC2.63□□□□□ -1.99
EBF3Q9H4W6 AC021753.1-201ENST00000635724 168 ntBASIC2.63□□□□□ -1.99
EBF3Q9H4W6 AC135776.4-201ENST00000624300 1904 ntBASIC2.63□□□□□ -1.99
EBF3Q9H4W6 AC099654.7-201ENST00000635788 2127 ntBASIC2.63□□□□□ -1.99
EBF3Q9H4W6 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
EBF3Q9H4W6 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
EBF3Q9H4W6 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.63□□□□□ -1.99
EBF3Q9H4W6 RNU6-858P-201ENST00000362436 107 ntBASIC2.62□□□□□ -1.99
EBF3Q9H4W6 SNORD56.1-201ENST00000362913 68 ntBASIC2.62□□□□□ -1.99
EBF3Q9H4W6 RNU6-961P-201ENST00000363893 105 ntBASIC2.62□□□□□ -1.99
EBF3Q9H4W6 SNORD114-30-201ENST00000364448 72 ntBASIC2.62□□□□□ -1.99
EBF3Q9H4W6 SNORA3.2-201ENST00000408221 125 ntBASIC2.62□□□□□ -1.99
EBF3Q9H4W6 RNA5SP390-201ENST00000410191 113 ntBASIC2.62□□□□□ -1.99
EBF3Q9H4W6 EIF1AXP1-201ENST00000419267 435 ntBASIC2.62□□□□□ -1.99
EBF3Q9H4W6 AL121890.1-201ENST00000435457 205 ntBASIC2.62□□□□□ -1.99
EBF3Q9H4W6 AC096638.1-201ENST00000444678 216 ntBASIC2.62□□□□□ -1.99
EBF3Q9H4W6 AP001025.1-201ENST00000486139 332 ntBASIC2.62□□□□□ -1.99
EBF3Q9H4W6 YWHAEP4-201ENST00000505390 198 ntBASIC2.62□□□□□ -1.99
EBF3Q9H4W6 RNU6-1114P-201ENST00000516022 107 ntBASIC2.62□□□□□ -1.99
EBF3Q9H4W6 SNORA25.14-201ENST00000516481 132 ntBASIC2.62□□□□□ -1.99
EBF3Q9H4W6 AC016256.1-201ENST00000547971 354 ntBASIC2.62□□□□□ -1.99
EBF3Q9H4W6 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.62□□□□□ -1.99
EBF3Q9H4W6 ZNF271P-202ENST00000465539 1970 ntBASIC2.61□□□□□ -1.99
EBF3Q9H4W6 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.61□□□□□ -1.99
EBF3Q9H4W6 U8.2-201ENST00000363156 134 ntBASIC2.61□□□□□ -1.99
EBF3Q9H4W6 Y_RNA.170-201ENST00000363746 110 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms