Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 AC087477.1-201ENST00000465747 340 ntBASIC2.77□□□□□ -1.97
VPS16Q9H269 AP000870.1-201ENST00000472927 406 ntBASIC2.77□□□□□ -1.97
VPS16Q9H269 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.77□□□□□ -1.97
VPS16Q9H269 MIR4643-201ENST00000577473 78 ntBASIC2.77□□□□□ -1.97
VPS16Q9H269 MIR5571-201ENST00000577998 113 ntBASIC2.77□□□□□ -1.97
VPS16Q9H269 MIR5194-201ENST00000582634 120 ntBASIC2.77□□□□□ -1.97
VPS16Q9H269 AL670379.2-201ENST00000604983 252 ntBASIC2.77□□□□□ -1.97
VPS16Q9H269 AL033523.1-201ENST00000605153 153 ntBASIC2.77□□□□□ -1.97
VPS16Q9H269 Y_RNA.772-201ENST00000606692 102 ntBASIC2.77□□□□□ -1.97
VPS16Q9H269 AL449363.1-201ENST00000617815 186 ntBASIC2.77□□□□□ -1.97
VPS16Q9H269 AC010297.1-201ENST00000623948 149 ntBASIC2.77□□□□□ -1.97
VPS16Q9H269 AC135776.4-201ENST00000624300 1904 ntBASIC2.77□□□□□ -1.97
VPS16Q9H269 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
VPS16Q9H269 MIR6073-201ENST00000352083 89 ntBASIC2.76□□□□□ -1.97
VPS16Q9H269 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
VPS16Q9H269 RNA5SP361-201ENST00000362686 118 ntBASIC2.76□□□□□ -1.97
VPS16Q9H269 Y_RNA.54-201ENST00000362766 105 ntBASIC2.76□□□□□ -1.97
VPS16Q9H269 Y_RNA.65-201ENST00000362846 100 ntBASIC2.76□□□□□ -1.97
VPS16Q9H269 RNU5B-2P-201ENST00000363036 113 ntBASIC2.76□□□□□ -1.97
VPS16Q9H269 Y_RNA.269-201ENST00000364685 89 ntBASIC2.76□□□□□ -1.97
VPS16Q9H269 SNORA29-201ENST00000384183 140 ntBASIC2.76□□□□□ -1.97
VPS16Q9H269 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
VPS16Q9H269 Y_RNA.602-201ENST00000410535 92 ntBASIC2.76□□□□□ -1.97
VPS16Q9H269 PIGPP3-201ENST00000425307 415 ntBASIC2.76□□□□□ -1.97
VPS16Q9H269 AL445687.1-201ENST00000439946 251 ntBASIC2.76□□□□□ -1.97
VPS16Q9H269 AC025750.2-201ENST00000442609 450 ntBASIC2.76□□□□□ -1.97
VPS16Q9H269 EEF1B2P7-201ENST00000451177 676 ntBASIC2.76□□□□□ -1.97
VPS16Q9H269 HSPE1P25-201ENST00000455484 251 ntBASIC2.76□□□□□ -1.97
VPS16Q9H269 RNU6-496P-201ENST00000516145 99 ntBASIC2.76□□□□□ -1.97
VPS16Q9H269 SCARNA24.2-201ENST00000516968 130 ntBASIC2.76□□□□□ -1.97
VPS16Q9H269 ELOCP29-201ENST00000588193 334 ntBASIC2.76□□□□□ -1.97
VPS16Q9H269 AL034555.1-201ENST00000604816 211 ntBASIC2.76□□□□□ -1.97
VPS16Q9H269 RMST_6.1-201ENST00000611980 203 ntBASIC2.76□□□□□ -1.97
VPS16Q9H269 MIR5739-201ENST00000619803 80 ntBASIC2.76□□□□□ -1.97
VPS16Q9H269 AC006386.2-201ENST00000624491 75 ntBASIC2.76□□□□□ -1.97
VPS16Q9H269 AC012005.1-201ENST00000624575 75 ntBASIC2.76□□□□□ -1.97
VPS16Q9H269 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.76□□□□□ -1.97
VPS16Q9H269 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS16Q9H269 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
VPS16Q9H269 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
VPS16Q9H269 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.75□□□□□ -1.97
VPS16Q9H269 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
VPS16Q9H269 RNU6-1266P-201ENST00000362794 105 ntBASIC2.75□□□□□ -1.97
VPS16Q9H269 RNU6-926P-201ENST00000384075 107 ntBASIC2.75□□□□□ -1.97
VPS16Q9H269 U8.10-201ENST00000384260 133 ntBASIC2.75□□□□□ -1.97
VPS16Q9H269 RNU1-139P-201ENST00000391307 165 ntBASIC2.75□□□□□ -1.97
VPS16Q9H269 RNU2-52P-201ENST00000410680 190 ntBASIC2.75□□□□□ -1.97
VPS16Q9H269 AL139156.1-201ENST00000412785 841 ntBASIC2.75□□□□□ -1.97
VPS16Q9H269 COTL1P1-201ENST00000422309 375 ntBASIC2.75□□□□□ -1.97
VPS16Q9H269 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.75□□□□□ -1.97
VPS16Q9H269 RPS12P2-201ENST00000439728 269 ntBASIC2.75□□□□□ -1.97
VPS16Q9H269 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.75□□□□□ -1.97
VPS16Q9H269 RPS3P1-201ENST00000456781 192 ntBASIC2.75□□□□□ -1.97
VPS16Q9H269 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.75□□□□□ -1.97
VPS16Q9H269 AC096725.1-201ENST00000514266 313 ntBASIC2.75□□□□□ -1.97
VPS16Q9H269 RRN3P3-201ENST00000549207 578 ntBASIC2.75□□□□□ -1.97
VPS16Q9H269 AC027288.2-201ENST00000553028 243 ntBASIC2.75□□□□□ -1.97
VPS16Q9H269 MIR3923-201ENST00000579521 83 ntBASIC2.75□□□□□ -1.97
VPS16Q9H269 AL512605.2-201ENST00000592972 256 ntBASIC2.75□□□□□ -1.97
VPS16Q9H269 FTX_2.1-201ENST00000618816 94 ntBASIC2.75□□□□□ -1.97
VPS16Q9H269 AC137590.2-201ENST00000619709 240 ntBASIC2.75□□□□□ -1.97
VPS16Q9H269 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS16Q9H269 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.74□□□□□ -1.97
VPS16Q9H269 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VPS16Q9H269 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS16Q9H269 RNU6-280P-201ENST00000364145 104 ntBASIC2.74□□□□□ -1.97
VPS16Q9H269 SNORA36A-201ENST00000384221 132 ntBASIC2.74□□□□□ -1.97
VPS16Q9H269 RNU4-61P-201ENST00000411243 107 ntBASIC2.74□□□□□ -1.97
VPS16Q9H269 AC012306.1-201ENST00000423267 114 ntBASIC2.74□□□□□ -1.97
VPS16Q9H269 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.74□□□□□ -1.97
VPS16Q9H269 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.74□□□□□ -1.97
VPS16Q9H269 CYP2C59P-201ENST00000457790 269 ntBASIC2.74□□□□□ -1.97
VPS16Q9H269 SNORD109B-201ENST00000458961 67 ntBASIC2.74□□□□□ -1.97
VPS16Q9H269 SNORD109A-201ENST00000459128 67 ntBASIC2.74□□□□□ -1.97
VPS16Q9H269 RNU6-1114P-201ENST00000516022 107 ntBASIC2.74□□□□□ -1.97
VPS16Q9H269 SNORA31.16-201ENST00000516773 139 ntBASIC2.74□□□□□ -1.97
VPS16Q9H269 SNORA81.3-201ENST00000517283 198 ntBASIC2.74□□□□□ -1.97
VPS16Q9H269 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.74□□□□□ -1.97
VPS16Q9H269 GTF3AP2-201ENST00000557014 266 ntBASIC2.74□□□□□ -1.97
VPS16Q9H269 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.74□□□□□ -1.97
VPS16Q9H269 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.74□□□□□ -1.97
VPS16Q9H269 AL049779.4-201ENST00000604500 156 ntBASIC2.74□□□□□ -1.97
VPS16Q9H269 FO624990.1-201ENST00000636373 85 ntBASIC2.74□□□□□ -1.97
VPS16Q9H269 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VPS16Q9H269 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
VPS16Q9H269 AL365361.1-201ENST00000566942 3481 ntBASIC2.73□□□□□ -1.97
VPS16Q9H269 RNU6-879P-201ENST00000364328 108 ntBASIC2.73□□□□□ -1.97
VPS16Q9H269 Y_RNA.286-201ENST00000364813 102 ntBASIC2.73□□□□□ -1.97
VPS16Q9H269 Y_RNA.297-201ENST00000364950 91 ntBASIC2.73□□□□□ -1.97
VPS16Q9H269 RNU1-138P-201ENST00000384093 164 ntBASIC2.73□□□□□ -1.97
VPS16Q9H269 Y_RNA.555-201ENST00000384673 110 ntBASIC2.73□□□□□ -1.97
VPS16Q9H269 MIR10B-201ENST00000385011 110 ntBASIC2.73□□□□□ -1.97
VPS16Q9H269 MIR29B2-201ENST00000385055 81 ntBASIC2.73□□□□□ -1.97
VPS16Q9H269 MIR153-2-201ENST00000385225 87 ntBASIC2.73□□□□□ -1.97
VPS16Q9H269 RNU6-220P-201ENST00000390919 107 ntBASIC2.73□□□□□ -1.97
VPS16Q9H269 AC005002.2-201ENST00000438228 269 ntBASIC2.73□□□□□ -1.97
VPS16Q9H269 AC096638.1-201ENST00000444678 216 ntBASIC2.73□□□□□ -1.97
VPS16Q9H269 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.73□□□□□ -1.97
VPS16Q9H269 PRELID3BP1-201ENST00000457142 540 ntBASIC2.73□□□□□ -1.97
VPS16Q9H269 RPL26P26-201ENST00000480251 434 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms