Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
ALX4Q9H161 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
ALX4Q9H161 Y_RNA.201-201ENST00000364052 96 ntBASIC0.7□□□□□ -2.3
ALX4Q9H161 RNU6-1286P-201ENST00000383871 107 ntBASIC0.7□□□□□ -2.3
ALX4Q9H161 Y_RNA.540-201ENST00000384638 111 ntBASIC0.7□□□□□ -2.3
ALX4Q9H161 RNU6-1031P-201ENST00000384773 107 ntBASIC0.7□□□□□ -2.3
ALX4Q9H161 MT-TH-201ENST00000387441 69 ntBASIC0.7□□□□□ -2.3
ALX4Q9H161 RNA5SP467-201ENST00000391274 118 ntBASIC0.7□□□□□ -2.3
ALX4Q9H161 MTND2P18-201ENST00000419962 1030 ntBASIC0.7□□□□□ -2.3
ALX4Q9H161 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.7□□□□□ -2.3
ALX4Q9H161 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.7□□□□□ -2.3
ALX4Q9H161 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.7□□□□□ -2.3
ALX4Q9H161 MTCO3P8-201ENST00000453691 755 ntBASIC0.7□□□□□ -2.3
ALX4Q9H161 RNU7-180P-201ENST00000459240 63 ntBASIC0.7□□□□□ -2.3
ALX4Q9H161 RNU7-57P-201ENST00000459540 60 ntBASIC0.7□□□□□ -2.3
ALX4Q9H161 Y_RNA.670-201ENST00000516255 105 ntBASIC0.7□□□□□ -2.3
ALX4Q9H161 RNA5SP480-201ENST00000516840 109 ntBASIC0.7□□□□□ -2.3
ALX4Q9H161 SNORA70.22-201ENST00000517160 124 ntBASIC0.7□□□□□ -2.3
ALX4Q9H161 RNU6-165P-201ENST00000517170 99 ntBASIC0.7□□□□□ -2.3
ALX4Q9H161 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.7□□□□□ -2.3
ALX4Q9H161 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC0.7□□□□□ -2.3
ALX4Q9H161 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.7□□□□□ -2.3
ALX4Q9H161 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.7□□□□□ -2.3
ALX4Q9H161 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.7□□□□□ -2.3
ALX4Q9H161 TPRKBP2-201ENST00000565969 475 ntBASIC0.7□□□□□ -2.3
ALX4Q9H161 SNRPGP20-201ENST00000604477 205 ntBASIC0.7□□□□□ -2.3
ALX4Q9H161 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.7□□□□□ -2.3
ALX4Q9H161 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.7□□□□□ -2.3
ALX4Q9H161 MIR373-201ENST00000362273 69 ntBASIC0.69□□□□□ -2.3
ALX4Q9H161 RNU6-1305P-201ENST00000364353 104 ntBASIC0.69□□□□□ -2.3
ALX4Q9H161 SNORA72.3-201ENST00000365074 132 ntBASIC0.69□□□□□ -2.3
ALX4Q9H161 MIR7-2-201ENST00000384970 110 ntBASIC0.69□□□□□ -2.3
ALX4Q9H161 MIR532-201ENST00000385025 91 ntBASIC0.69□□□□□ -2.3
ALX4Q9H161 MIR100-201ENST00000385259 80 ntBASIC0.69□□□□□ -2.3
ALX4Q9H161 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
ALX4Q9H161 RNU6-57P-201ENST00000411348 103 ntBASIC0.69□□□□□ -2.3
ALX4Q9H161 AC004866.1-201ENST00000411748 78 ntBASIC0.69□□□□□ -2.3
ALX4Q9H161 MTATP6P18-201ENST00000417994 673 ntBASIC0.69□□□□□ -2.3
ALX4Q9H161 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC0.69□□□□□ -2.3
ALX4Q9H161 MTCO2P11-201ENST00000431069 680 ntBASIC0.69□□□□□ -2.3
ALX4Q9H161 U8.21-201ENST00000459536 136 ntBASIC0.69□□□□□ -2.3
ALX4Q9H161 AC007215.1-201ENST00000464893 276 ntBASIC0.69□□□□□ -2.3
ALX4Q9H161 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.69□□□□□ -2.3
ALX4Q9H161 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.69□□□□□ -2.3
ALX4Q9H161 SNORA14.1-201ENST00000516113 141 ntBASIC0.69□□□□□ -2.3
ALX4Q9H161 ACA64.5-201ENST00000516207 127 ntBASIC0.69□□□□□ -2.3
ALX4Q9H161 RNU6-1069P-201ENST00000516612 133 ntBASIC0.69□□□□□ -2.3
ALX4Q9H161 RNU1-142P-201ENST00000516682 145 ntBASIC0.69□□□□□ -2.3
ALX4Q9H161 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC0.69□□□□□ -2.3
ALX4Q9H161 MTND4P7-201ENST00000523876 130 ntBASIC0.69□□□□□ -2.3
ALX4Q9H161 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC0.69□□□□□ -2.3
ALX4Q9H161 FAM71BP1-201ENST00000604431 523 ntBASIC0.69□□□□□ -2.3
ALX4Q9H161 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.69□□□□□ -2.3
ALX4Q9H161 uc_338.34-201ENST00000617467 174 ntBASIC0.69□□□□□ -2.3
ALX4Q9H161 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.69□□□□□ -2.3
ALX4Q9H161 AC005609.4-201ENST00000625071 447 ntBASIC0.69□□□□□ -2.3
ALX4Q9H161 SRP54-214ENST00000630962 162 ntTSL 5 BASIC0.69□□□□□ -2.3
ALX4Q9H161 MIR19B1-201ENST00000384829 87 ntBASIC0.68□□□□□ -2.3
ALX4Q9H161 MIR320B2-201ENST00000408479 138 ntBASIC0.68□□□□□ -2.3
ALX4Q9H161 RN7SKP200-201ENST00000410564 320 ntBASIC0.68□□□□□ -2.3
ALX4Q9H161 AC008134.1-201ENST00000420943 193 ntBASIC0.68□□□□□ -2.3
ALX4Q9H161 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.68□□□□□ -2.3
ALX4Q9H161 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.68□□□□□ -2.3
ALX4Q9H161 MTND3P9-201ENST00000429526 346 ntBASIC0.68□□□□□ -2.3
ALX4Q9H161 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.68□□□□□ -2.3
ALX4Q9H161 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.68□□□□□ -2.3
ALX4Q9H161 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.68□□□□□ -2.3
ALX4Q9H161 PSMC1P5-201ENST00000512850 177 ntBASIC0.68□□□□□ -2.3
ALX4Q9H161 AC060788.1-201ENST00000521318 469 ntBASIC0.68□□□□□ -2.3
ALX4Q9H161 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.68□□□□□ -2.3
ALX4Q9H161 MIR3913-1-201ENST00000577744 102 ntBASIC0.68□□□□□ -2.3
ALX4Q9H161 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.68□□□□□ -2.3
ALX4Q9H161 AC146944.4-201ENST00000602697 718 ntBASIC0.68□□□□□ -2.3
ALX4Q9H161 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.68□□□□□ -2.3
ALX4Q9H161 HULC.1-201ENST00000612720 240 ntBASIC0.68□□□□□ -2.3
ALX4Q9H161 MIR598-201ENST00000384868 97 ntBASIC0.67□□□□□ -2.3
ALX4Q9H161 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
ALX4Q9H161 RNA5SP219-201ENST00000390940 113 ntBASIC0.67□□□□□ -2.3
ALX4Q9H161 SNORA26.8-201ENST00000391306 124 ntBASIC0.67□□□□□ -2.3
ALX4Q9H161 AC006461.1-201ENST00000412637 326 ntBASIC0.67□□□□□ -2.3
ALX4Q9H161 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.67□□□□□ -2.3
ALX4Q9H161 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.67□□□□□ -2.3
ALX4Q9H161 MTCYBP8-201ENST00000422855 651 ntBASIC0.67□□□□□ -2.3
ALX4Q9H161 AC010154.1-201ENST00000425857 269 ntBASIC0.67□□□□□ -2.3
ALX4Q9H161 RAB28P5-201ENST00000427490 651 ntBASIC0.67□□□□□ -2.3
ALX4Q9H161 AL606517.2-201ENST00000442855 241 ntBASIC0.67□□□□□ -2.3
ALX4Q9H161 RNU7-63P-201ENST00000459054 62 ntBASIC0.67□□□□□ -2.3
ALX4Q9H161 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.67□□□□□ -2.3
ALX4Q9H161 SNORA31.4-201ENST00000516049 129 ntBASIC0.67□□□□□ -2.3
ALX4Q9H161 SNORA31.10-201ENST00000516482 106 ntBASIC0.67□□□□□ -2.3
ALX4Q9H161 FGF7P1-201ENST00000582820 288 ntBASIC0.67□□□□□ -2.3
ALX4Q9H161 AL513534.2-201ENST00000603836 250 ntBASIC0.67□□□□□ -2.3
ALX4Q9H161 AC097065.2-201ENST00000608159 533 ntBASIC0.67□□□□□ -2.3
ALX4Q9H161 AC024933.1-201ENST00000608472 348 ntBASIC0.67□□□□□ -2.3
ALX4Q9H161 AC109347.2-201ENST00000610220 349 ntBASIC0.67□□□□□ -2.3
ALX4Q9H161 AL359075.3-201ENST00000613288 217 ntBASIC0.67□□□□□ -2.3
ALX4Q9H161 AC068792.1-201ENST00000621354 417 ntBASIC0.67□□□□□ -2.3
ALX4Q9H161 snoZ196.1-201ENST00000625269 89 ntBASIC0.67□□□□□ -2.3
ALX4Q9H161 U6.108-201ENST00000637764 58 ntBASIC0.67□□□□□ -2.3
ALX4Q9H161 Y_RNA.123-201ENST00000363338 102 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms