Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 SNORA33-201ENST00000363664 130 ntBASIC1.52□□□□□ -2.17
DDX47Q9H0S4 RNU4-9P-201ENST00000364951 139 ntBASIC1.52□□□□□ -2.17
DDX47Q9H0S4 MTCO3P29-201ENST00000432119 779 ntBASIC1.52□□□□□ -2.17
DDX47Q9H0S4 RNU6-344P-201ENST00000516635 111 ntBASIC1.52□□□□□ -2.17
DDX47Q9H0S4 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.52□□□□□ -2.17
DDX47Q9H0S4 MIR7974-201ENST00000615835 79 ntBASIC1.52□□□□□ -2.17
DDX47Q9H0S4 AL353997.5-201ENST00000618886 171 ntBASIC1.52□□□□□ -2.17
DDX47Q9H0S4 AC090617.10-201ENST00000624308 134 ntBASIC1.52□□□□□ -2.17
DDX47Q9H0S4 AC095038.3-201ENST00000634439 195 ntBASIC1.52□□□□□ -2.17
DDX47Q9H0S4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.52□□□□□ -2.17
DDX47Q9H0S4 SNORD115-8-201ENST00000363856 82 ntBASIC1.51□□□□□ -2.17
DDX47Q9H0S4 SNORD115-32-201ENST00000364079 82 ntBASIC1.51□□□□□ -2.17
DDX47Q9H0S4 SNORD115-38-201ENST00000365037 82 ntBASIC1.51□□□□□ -2.17
DDX47Q9H0S4 Y_RNA.554-201ENST00000384672 102 ntBASIC1.51□□□□□ -2.17
DDX47Q9H0S4 MIR32-201ENST00000384965 70 ntBASIC1.51□□□□□ -2.17
DDX47Q9H0S4 RNU6-482P-201ENST00000391068 107 ntBASIC1.51□□□□□ -2.17
DDX47Q9H0S4 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.51□□□□□ -2.17
DDX47Q9H0S4 RNA5SP504-201ENST00000410676 117 ntBASIC1.51□□□□□ -2.17
DDX47Q9H0S4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.51□□□□□ -2.17
DDX47Q9H0S4 AL513185.2-201ENST00000425543 193 ntBASIC1.51□□□□□ -2.17
DDX47Q9H0S4 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.51□□□□□ -2.17
DDX47Q9H0S4 HMGN2P34-201ENST00000437647 269 ntBASIC1.51□□□□□ -2.17
DDX47Q9H0S4 HSPE1P24-201ENST00000450782 238 ntBASIC1.51□□□□□ -2.17
DDX47Q9H0S4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.51□□□□□ -2.17
DDX47Q9H0S4 RNU7-57P-201ENST00000459540 60 ntBASIC1.51□□□□□ -2.17
DDX47Q9H0S4 RNA5SP481-201ENST00000516814 122 ntBASIC1.51□□□□□ -2.17
DDX47Q9H0S4 RNA5SP54-201ENST00000516951 92 ntBASIC1.51□□□□□ -2.17
DDX47Q9H0S4 MTND1P5-201ENST00000517906 940 ntBASIC1.51□□□□□ -2.17
DDX47Q9H0S4 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.51□□□□□ -2.17
DDX47Q9H0S4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.51□□□□□ -2.17
DDX47Q9H0S4 MIR4422-201ENST00000581938 83 ntBASIC1.51□□□□□ -2.17
DDX47Q9H0S4 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.51□□□□□ -2.17
DDX47Q9H0S4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
DDX47Q9H0S4 AC006001.4-201ENST00000622243 395 ntBASIC1.51□□□□□ -2.17
DDX47Q9H0S4 AC100821.1-201ENST00000523153 2479 ntBASIC1.51□□□□□ -2.17
DDX47Q9H0S4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
DDX47Q9H0S4 ZNF72P-201ENST00000425869 1908 ntBASIC1.5□□□□□ -2.17
DDX47Q9H0S4 MIR302D-201ENST00000362275 68 ntBASIC1.5□□□□□ -2.17
DDX47Q9H0S4 Y_RNA.9-201ENST00000362354 101 ntBASIC1.5□□□□□ -2.17
DDX47Q9H0S4 Y_RNA.67-201ENST00000362870 100 ntBASIC1.5□□□□□ -2.17
DDX47Q9H0S4 RNU6-623P-201ENST00000363143 105 ntBASIC1.5□□□□□ -2.17
DDX47Q9H0S4 RNY4P14-201ENST00000363656 96 ntBASIC1.5□□□□□ -2.17
DDX47Q9H0S4 RNU6-271P-201ENST00000363858 105 ntBASIC1.5□□□□□ -2.17
DDX47Q9H0S4 RNA5SP190-201ENST00000365222 118 ntBASIC1.5□□□□□ -2.17
DDX47Q9H0S4 RNU6-57P-201ENST00000411348 103 ntBASIC1.5□□□□□ -2.17
DDX47Q9H0S4 AC007098.1-201ENST00000420122 367 ntBASIC1.5□□□□□ -2.17
DDX47Q9H0S4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.5□□□□□ -2.17
DDX47Q9H0S4 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.5□□□□□ -2.17
DDX47Q9H0S4 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.5□□□□□ -2.17
DDX47Q9H0S4 AL354695.1-201ENST00000427935 228 ntBASIC1.5□□□□□ -2.17
DDX47Q9H0S4 AC069257.2-201ENST00000441819 155 ntBASIC1.5□□□□□ -2.17
DDX47Q9H0S4 AC074290.1-201ENST00000448883 135 ntBASIC1.5□□□□□ -2.17
DDX47Q9H0S4 RNU6-237P-201ENST00000515985 71 ntBASIC1.5□□□□□ -2.17
DDX47Q9H0S4 RNU1-117P-201ENST00000517041 158 ntBASIC1.5□□□□□ -2.17
DDX47Q9H0S4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.5□□□□□ -2.17
DDX47Q9H0S4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.5□□□□□ -2.17
DDX47Q9H0S4 TPRKBP2-201ENST00000565969 475 ntBASIC1.5□□□□□ -2.17
DDX47Q9H0S4 EIF1P4-201ENST00000572664 335 ntBASIC1.5□□□□□ -2.17
DDX47Q9H0S4 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.5□□□□□ -2.17
DDX47Q9H0S4 MIR3942-201ENST00000585264 109 ntBASIC1.5□□□□□ -2.17
DDX47Q9H0S4 AC019193.3-201ENST00000609144 554 ntBASIC1.5□□□□□ -2.17
DDX47Q9H0S4 AC006504.8-201ENST00000621046 635 ntBASIC1.5□□□□□ -2.17
DDX47Q9H0S4 AL078596.1-201ENST00000624856 447 ntBASIC1.5□□□□□ -2.17
DDX47Q9H0S4 SNORD116-11-201ENST00000383882 92 ntBASIC1.49□□□□□ -2.17
DDX47Q9H0S4 RNU6-245P-201ENST00000384020 107 ntBASIC1.49□□□□□ -2.17
DDX47Q9H0S4 MIR517C-201ENST00000385103 95 ntBASIC1.49□□□□□ -2.17
DDX47Q9H0S4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.49□□□□□ -2.17
DDX47Q9H0S4 RNU1-78P-201ENST00000391248 165 ntBASIC1.49□□□□□ -2.17
DDX47Q9H0S4 RNU6-373P-201ENST00000411247 98 ntBASIC1.49□□□□□ -2.17
DDX47Q9H0S4 AC016909.1-201ENST00000415916 166 ntBASIC1.49□□□□□ -2.17
DDX47Q9H0S4 AL589823.1-201ENST00000429577 183 ntBASIC1.49□□□□□ -2.17
DDX47Q9H0S4 FTH1P12-201ENST00000432137 551 ntBASIC1.49□□□□□ -2.17
DDX47Q9H0S4 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.49□□□□□ -2.17
DDX47Q9H0S4 ACA59.1-201ENST00000515966 143 ntBASIC1.49□□□□□ -2.17
DDX47Q9H0S4 RNU6-58P-201ENST00000517143 103 ntBASIC1.49□□□□□ -2.17
DDX47Q9H0S4 MIR3124-201ENST00000582636 67 ntBASIC1.49□□□□□ -2.17
DDX47Q9H0S4 AC124303.1-201ENST00000605703 360 ntBASIC1.49□□□□□ -2.17
DDX47Q9H0S4 AC012557.2-201ENST00000605919 418 ntBASIC1.49□□□□□ -2.17
DDX47Q9H0S4 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
DDX47Q9H0S4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
DDX47Q9H0S4 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
DDX47Q9H0S4 RNU1-62P-201ENST00000362599 164 ntBASIC1.48□□□□□ -2.17
DDX47Q9H0S4 RNU1-17P-201ENST00000363022 152 ntBASIC1.48□□□□□ -2.17
DDX47Q9H0S4 RNU4-13P-201ENST00000364019 141 ntBASIC1.48□□□□□ -2.17
DDX47Q9H0S4 Y_RNA.287-201ENST00000364853 94 ntBASIC1.48□□□□□ -2.17
DDX47Q9H0S4 SNORA72.2-201ENST00000365028 127 ntBASIC1.48□□□□□ -2.17
DDX47Q9H0S4 Y_RNA.318-201ENST00000365131 97 ntBASIC1.48□□□□□ -2.17
DDX47Q9H0S4 SNORA67.5-201ENST00000391036 107 ntBASIC1.48□□□□□ -2.17
DDX47Q9H0S4 AL161935.2-201ENST00000414627 60 ntBASIC1.48□□□□□ -2.17
DDX47Q9H0S4 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.48□□□□□ -2.17
DDX47Q9H0S4 AC073910.1-201ENST00000445047 438 ntBASIC1.48□□□□□ -2.17
DDX47Q9H0S4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.48□□□□□ -2.17
DDX47Q9H0S4 MTCYBP18-201ENST00000501056 747 ntBASIC1.48□□□□□ -2.17
DDX47Q9H0S4 RNU6-1146P-201ENST00000516282 102 ntBASIC1.48□□□□□ -2.17
DDX47Q9H0S4 RNU6-720P-201ENST00000516363 108 ntBASIC1.48□□□□□ -2.17
DDX47Q9H0S4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC1.48□□□□□ -2.17
DDX47Q9H0S4 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.48□□□□□ -2.17
DDX47Q9H0S4 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.48□□□□□ -2.17
DDX47Q9H0S4 MIR4769-201ENST00000584126 77 ntBASIC1.48□□□□□ -2.17
DDX47Q9H0S4 SNORD11B-201ENST00000607707 90 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms