Protein–RNA interactions for Protein: Q9BQ31

KCNS3, Potassium voltage-gated channel subfamily S member 3, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS3Q9BQ31 AC092436.3-201ENST00000511788 257 ntBASIC0.99□□□□□ -2.25
KCNS3Q9BQ31 RNU6-948P-201ENST00000516374 107 ntBASIC0.99□□□□□ -2.25
KCNS3Q9BQ31 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
KCNS3Q9BQ31 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC0.99□□□□□ -2.25
KCNS3Q9BQ31 MIR4742-201ENST00000581069 85 ntBASIC0.99□□□□□ -2.25
KCNS3Q9BQ31 FGF7P1-201ENST00000582820 288 ntBASIC0.99□□□□□ -2.25
KCNS3Q9BQ31 AL365434.2-201ENST00000607979 234 ntBASIC0.99□□□□□ -2.25
KCNS3Q9BQ31 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.99□□□□□ -2.25
KCNS3Q9BQ31 AC017083.3-201ENST00000609955 700 ntBASIC0.99□□□□□ -2.25
KCNS3Q9BQ31 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.99□□□□□ -2.25
KCNS3Q9BQ31 AC012676.2-201ENST00000619258 186 ntBASIC0.99□□□□□ -2.25
KCNS3Q9BQ31 OR5AK4P-201ENST00000635912 903 ntBASIC0.99□□□□□ -2.25
KCNS3Q9BQ31 RNU6-534P-201ENST00000364877 106 ntBASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 SNORA25.9-201ENST00000365087 128 ntBASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 MIR487A-201ENST00000385009 80 ntBASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 Y_RNA.582-201ENST00000391023 95 ntBASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 MRPS10P2-201ENST00000431226 381 ntBASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 MTND1P26-201ENST00000440488 538 ntBASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 HSPE1P13-201ENST00000451143 297 ntBASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 AC007215.1-201ENST00000464893 276 ntBASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 COX6CP14-201ENST00000469580 174 ntBASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 AC083798.1-201ENST00000472671 131 ntBASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 AC010424.1-201ENST00000506336 297 ntBASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 UBL5P1-201ENST00000507979 193 ntBASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 SNORD116-28-201ENST00000516123 91 ntBASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 RN7SKP88-201ENST00000516847 250 ntBASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 AC104383.1-201ENST00000530297 370 ntBASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 AC006362.1-201ENST00000567392 174 ntBASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 MIR4709-201ENST00000577272 72 ntBASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 7SK.8-201ENST00000612110 250 ntBASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 FAM157A-202ENST00000615155 405 ntBASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 7SK.11-201ENST00000615477 250 ntBASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 7SK.13-201ENST00000622040 250 ntBASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 AC006001.4-201ENST00000622243 395 ntBASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 AC078883.4-201ENST00000623218 367 ntBASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 AL359697.1-201ENST00000624879 587 ntBASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 SCARNA4-201ENST00000629045 128 ntBASIC0.98□□□□□ -2.25
KCNS3Q9BQ31 ELL2P3-201ENST00000457883 1602 ntBASIC0.97□□□□□ -2.25
KCNS3Q9BQ31 RNU6-1305P-201ENST00000364353 104 ntBASIC0.97□□□□□ -2.25
KCNS3Q9BQ31 Y_RNA.287-201ENST00000364853 94 ntBASIC0.97□□□□□ -2.25
KCNS3Q9BQ31 SNORA72.2-201ENST00000365028 127 ntBASIC0.97□□□□□ -2.25
KCNS3Q9BQ31 SNORA69-201ENST00000383895 132 ntBASIC0.97□□□□□ -2.25
KCNS3Q9BQ31 Y_RNA.409-201ENST00000383990 98 ntBASIC0.97□□□□□ -2.25
KCNS3Q9BQ31 SNORA25-201ENST00000384384 134 ntBASIC0.97□□□□□ -2.25
KCNS3Q9BQ31 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
KCNS3Q9BQ31 CDK8P2-201ENST00000415020 547 ntBASIC0.97□□□□□ -2.25
KCNS3Q9BQ31 AC016909.1-201ENST00000415916 166 ntBASIC0.97□□□□□ -2.25
KCNS3Q9BQ31 COX6CP10-201ENST00000416832 224 ntBASIC0.97□□□□□ -2.25
KCNS3Q9BQ31 MTCO2P16-201ENST00000436962 677 ntBASIC0.97□□□□□ -2.25
KCNS3Q9BQ31 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.97□□□□□ -2.25
KCNS3Q9BQ31 RNU6-1208P-201ENST00000459588 107 ntBASIC0.97□□□□□ -2.25
KCNS3Q9BQ31 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.97□□□□□ -2.25
KCNS3Q9BQ31 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
KCNS3Q9BQ31 MTND3P12-201ENST00000559068 328 ntBASIC0.97□□□□□ -2.25
KCNS3Q9BQ31 AC136932.1-201ENST00000574771 208 ntBASIC0.97□□□□□ -2.25
KCNS3Q9BQ31 CPDP1-201ENST00000579660 283 ntBASIC0.97□□□□□ -2.25
KCNS3Q9BQ31 AC103810.9-201ENST00000606688 112 ntBASIC0.97□□□□□ -2.25
KCNS3Q9BQ31 BX284668.6-201ENST00000606899 438 ntBASIC0.97□□□□□ -2.25
KCNS3Q9BQ31 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC0.97□□□□□ -2.25
KCNS3Q9BQ31 AC027335.2-201ENST00000624030 375 ntBASIC0.97□□□□□ -2.25
KCNS3Q9BQ31 AL391516.1-201ENST00000554380 2449 ntBASIC0.96□□□□□ -2.26
KCNS3Q9BQ31 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
KCNS3Q9BQ31 Y_RNA.77-201ENST00000362962 107 ntBASIC0.96□□□□□ -2.26
KCNS3Q9BQ31 RNU6-417P-201ENST00000384712 107 ntBASIC0.96□□□□□ -2.26
KCNS3Q9BQ31 MIR521-1-201ENST00000384902 87 ntBASIC0.96□□□□□ -2.26
KCNS3Q9BQ31 MIR586-201ENST00000385035 97 ntBASIC0.96□□□□□ -2.26
KCNS3Q9BQ31 MIR514A2-201ENST00000385131 88 ntBASIC0.96□□□□□ -2.26
KCNS3Q9BQ31 MIR514A3-201ENST00000385132 88 ntBASIC0.96□□□□□ -2.26
KCNS3Q9BQ31 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
KCNS3Q9BQ31 DEFB108C-201ENST00000400154 252 ntBASIC0.96□□□□□ -2.26
KCNS3Q9BQ31 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC0.96□□□□□ -2.26
KCNS3Q9BQ31 RNU7-34P-201ENST00000459394 64 ntBASIC0.96□□□□□ -2.26
KCNS3Q9BQ31 RNU6-261P-201ENST00000459506 102 ntBASIC0.96□□□□□ -2.26
KCNS3Q9BQ31 RNU6-835P-201ENST00000516974 104 ntBASIC0.96□□□□□ -2.26
KCNS3Q9BQ31 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.96□□□□□ -2.26
KCNS3Q9BQ31 AL442163.3-201ENST00000554110 156 ntBASIC0.96□□□□□ -2.26
KCNS3Q9BQ31 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.96□□□□□ -2.26
KCNS3Q9BQ31 AC080078.3-201ENST00000605407 463 ntBASIC0.96□□□□□ -2.26
KCNS3Q9BQ31 MIR8076-201ENST00000611401 83 ntBASIC0.96□□□□□ -2.26
KCNS3Q9BQ31 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.96□□□□□ -2.26
KCNS3Q9BQ31 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.96□□□□□ -2.26
KCNS3Q9BQ31 AC090582.1-201ENST00000636321 199 ntBASIC0.96□□□□□ -2.26
KCNS3Q9BQ31 MIR3974-201ENST00000637126 96 ntBASIC0.96□□□□□ -2.26
KCNS3Q9BQ31 MTND4P5-201ENST00000435821 1374 ntBASIC0.96□□□□□ -2.26
KCNS3Q9BQ31 RNU6-53P-201ENST00000365367 106 ntBASIC0.95□□□□□ -2.26
KCNS3Q9BQ31 SNORA67.2-201ENST00000384300 149 ntBASIC0.95□□□□□ -2.26
KCNS3Q9BQ31 RNU6-784P-201ENST00000384330 106 ntBASIC0.95□□□□□ -2.26
KCNS3Q9BQ31 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.95□□□□□ -2.26
KCNS3Q9BQ31 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
KCNS3Q9BQ31 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
KCNS3Q9BQ31 RNA5SP109-201ENST00000391010 116 ntBASIC0.95□□□□□ -2.26
KCNS3Q9BQ31 RNA5SP467-201ENST00000391274 118 ntBASIC0.95□□□□□ -2.26
KCNS3Q9BQ31 RNU6-648P-201ENST00000410190 107 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms