Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.72□□□□□ -1.97
VRK1Q99986 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.72□□□□□ -1.97
VRK1Q99986 AC004467.1-201ENST00000615678 330 ntBASIC2.72□□□□□ -1.97
VRK1Q99986 U4atac.1-201ENST00000618345 95 ntBASIC2.72□□□□□ -1.97
VRK1Q99986 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.72□□□□□ -1.97
VRK1Q99986 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
VRK1Q99986 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
VRK1Q99986 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
VRK1Q99986 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
VRK1Q99986 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.97
VRK1Q99986 AC009487.4-201ENST00000624969 3585 ntBASIC2.71□□□□□ -1.97
VRK1Q99986 Z82195.2-201ENST00000612348 18351 ntBASIC2.71□□□□□ -1.98
VRK1Q99986 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.71□□□□□ -1.98
VRK1Q99986 MIR335-201ENST00000362173 94 ntBASIC2.71□□□□□ -1.98
VRK1Q99986 RNU6-545P-201ENST00000362681 104 ntBASIC2.71□□□□□ -1.98
VRK1Q99986 RNU6-1305P-201ENST00000364353 104 ntBASIC2.71□□□□□ -1.98
VRK1Q99986 SNORA72.2-201ENST00000365028 127 ntBASIC2.71□□□□□ -1.98
VRK1Q99986 MIR634-201ENST00000385208 97 ntBASIC2.71□□□□□ -1.98
VRK1Q99986 AL357139.1-201ENST00000407792 426 ntBASIC2.71□□□□□ -1.98
VRK1Q99986 HSPE1P25-201ENST00000455484 251 ntBASIC2.71□□□□□ -1.98
VRK1Q99986 AC016925.1-201ENST00000458303 298 ntBASIC2.71□□□□□ -1.98
VRK1Q99986 RNU6-965P-201ENST00000516721 96 ntBASIC2.71□□□□□ -1.98
VRK1Q99986 RNU7-110P-201ENST00000516891 62 ntBASIC2.71□□□□□ -1.98
VRK1Q99986 RN7SKP40-201ENST00000517211 242 ntBASIC2.71□□□□□ -1.98
VRK1Q99986 AP002001.1-203ENST00000534002 267 ntBASIC2.71□□□□□ -1.98
VRK1Q99986 AC055872.1-201ENST00000570978 278 ntBASIC2.71□□□□□ -1.98
VRK1Q99986 uc_338.25-201ENST00000613756 156 ntBASIC2.71□□□□□ -1.98
VRK1Q99986 AP001282.2-201ENST00000616149 309 ntBASIC2.71□□□□□ -1.98
VRK1Q99986 AC127459.3-201ENST00000624328 466 ntBASIC2.71□□□□□ -1.98
VRK1Q99986 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
VRK1Q99986 AC010615.1-201ENST00000594254 1764 ntBASIC2.71□□□□□ -1.98
VRK1Q99986 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.71□□□□□ -1.98
VRK1Q99986 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.7□□□□□ -1.98
VRK1Q99986 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.7□□□□□ -1.98
VRK1Q99986 RNU1-109P-201ENST00000383960 147 ntBASIC2.7□□□□□ -1.98
VRK1Q99986 RNU6-21P-201ENST00000384710 107 ntBASIC2.7□□□□□ -1.98
VRK1Q99986 SNORD15B-201ENST00000384714 146 ntBASIC2.7□□□□□ -1.98
VRK1Q99986 MIR548B-201ENST00000385247 97 ntBASIC2.7□□□□□ -1.98
VRK1Q99986 Y_RNA.602-201ENST00000410535 92 ntBASIC2.7□□□□□ -1.98
VRK1Q99986 AC139712.2-201ENST00000424302 339 ntBASIC2.7□□□□□ -1.98
VRK1Q99986 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.7□□□□□ -1.98
VRK1Q99986 UBBP3-201ENST00000445497 241 ntBASIC2.7□□□□□ -1.98
VRK1Q99986 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.7□□□□□ -1.98
VRK1Q99986 HMGN2P18-201ENST00000450680 270 ntBASIC2.7□□□□□ -1.98
VRK1Q99986 RNU6-1132P-201ENST00000459214 107 ntBASIC2.7□□□□□ -1.98
VRK1Q99986 AC114982.1-201ENST00000469402 321 ntBASIC2.7□□□□□ -1.98
VRK1Q99986 SRIP1-201ENST00000489235 288 ntBASIC2.7□□□□□ -1.98
VRK1Q99986 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.7□□□□□ -1.98
VRK1Q99986 RNU6-107P-201ENST00000516643 102 ntBASIC2.7□□□□□ -1.98
VRK1Q99986 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.7□□□□□ -1.98
VRK1Q99986 MIR3671-201ENST00000580455 88 ntBASIC2.7□□□□□ -1.98
VRK1Q99986 UBL5P2-201ENST00000583788 219 ntBASIC2.7□□□□□ -1.98
VRK1Q99986 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.7□□□□□ -1.98
VRK1Q99986 MIR4753-201ENST00000585119 83 ntBASIC2.7□□□□□ -1.98
VRK1Q99986 AL109918.3-201ENST00000603072 338 ntBASIC2.7□□□□□ -1.98
VRK1Q99986 AL590240.4-201ENST00000616908 390 ntBASIC2.7□□□□□ -1.98
VRK1Q99986 MIR6733-201ENST00000635723 61 ntBASIC2.7□□□□□ -1.98
VRK1Q99986 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
VRK1Q99986 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.7□□□□□ -1.98
VRK1Q99986 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.7□□□□□ -1.98
VRK1Q99986 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.7□□□□□ -1.98
VRK1Q99986 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VRK1Q99986 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.69□□□□□ -1.98
VRK1Q99986 Y_RNA.101-201ENST00000363154 102 ntBASIC2.69□□□□□ -1.98
VRK1Q99986 RNU6-290P-201ENST00000365212 101 ntBASIC2.69□□□□□ -1.98
VRK1Q99986 Y_RNA.541-201ENST00000384640 113 ntBASIC2.69□□□□□ -1.98
VRK1Q99986 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VRK1Q99986 RNU2-54P-201ENST00000410299 190 ntBASIC2.69□□□□□ -1.98
VRK1Q99986 RNA5SP274-201ENST00000410484 108 ntBASIC2.69□□□□□ -1.98
VRK1Q99986 AC104389.3-201ENST00000445629 235 ntBASIC2.69□□□□□ -1.98
VRK1Q99986 AC074290.1-201ENST00000448883 135 ntBASIC2.69□□□□□ -1.98
VRK1Q99986 AC005042.3-201ENST00000453230 174 ntBASIC2.69□□□□□ -1.98
VRK1Q99986 AC018868.1-201ENST00000491307 315 ntBASIC2.69□□□□□ -1.98
VRK1Q99986 MIR2682-201ENST00000580305 110 ntBASIC2.69□□□□□ -1.98
VRK1Q99986 AC091932.3-201ENST00000624223 323 ntBASIC2.69□□□□□ -1.98
VRK1Q99986 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
VRK1Q99986 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
VRK1Q99986 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.69□□□□□ -1.98
VRK1Q99986 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
VRK1Q99986 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.68□□□□□ -1.98
VRK1Q99986 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.68□□□□□ -1.98
VRK1Q99986 SNORA71.1-201ENST00000364523 117 ntBASIC2.68□□□□□ -1.98
VRK1Q99986 Y_RNA.331-201ENST00000365267 102 ntBASIC2.68□□□□□ -1.98
VRK1Q99986 RNU6-438P-201ENST00000365561 103 ntBASIC2.68□□□□□ -1.98
VRK1Q99986 RNU6-975P-201ENST00000384296 105 ntBASIC2.68□□□□□ -1.98
VRK1Q99986 RNU6-102P-201ENST00000384485 104 ntBASIC2.68□□□□□ -1.98
VRK1Q99986 Y_RNA.562-201ENST00000384695 113 ntBASIC2.68□□□□□ -1.98
VRK1Q99986 MIR1185-2-201ENST00000408687 86 ntBASIC2.68□□□□□ -1.98
VRK1Q99986 RNU4-30P-201ENST00000410245 143 ntBASIC2.68□□□□□ -1.98
VRK1Q99986 HMGN2P35-201ENST00000412164 270 ntBASIC2.68□□□□□ -1.98
VRK1Q99986 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.68□□□□□ -1.98
VRK1Q99986 COTL1P1-201ENST00000422309 375 ntBASIC2.68□□□□□ -1.98
VRK1Q99986 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.68□□□□□ -1.98
VRK1Q99986 AC093259.1-201ENST00000509755 300 ntBASIC2.68□□□□□ -1.98
VRK1Q99986 RNU6-1338P-201ENST00000516328 91 ntBASIC2.68□□□□□ -1.98
VRK1Q99986 RNA5SP490-201ENST00000517141 136 ntBASIC2.68□□□□□ -1.98
VRK1Q99986 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.68□□□□□ -1.98
VRK1Q99986 AC006386.2-201ENST00000624491 75 ntBASIC2.68□□□□□ -1.98
VRK1Q99986 AC012005.1-201ENST00000624575 75 ntBASIC2.68□□□□□ -1.98
VRK1Q99986 SCARNA15.3-201ENST00000626315 122 ntBASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms