Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
FOXC2Q99958 FGF7P6-202ENST00000451282 293 ntBASIC1.27□□□□□ -2.21
FOXC2Q99958 TRBVA-201ENST00000498804 316 ntBASIC1.27□□□□□ -2.21
FOXC2Q99958 AC026371.1-201ENST00000551867 419 ntBASIC1.27□□□□□ -2.21
FOXC2Q99958 EIF4A1P12-201ENST00000551910 141 ntBASIC1.27□□□□□ -2.21
FOXC2Q99958 MIR5094-201ENST00000578766 85 ntBASIC1.27□□□□□ -2.21
FOXC2Q99958 MIR4422-201ENST00000581938 83 ntBASIC1.27□□□□□ -2.21
FOXC2Q99958 FGF7P1-201ENST00000582820 288 ntBASIC1.27□□□□□ -2.21
FOXC2Q99958 AC080078.2-201ENST00000603766 501 ntBASIC1.27□□□□□ -2.21
FOXC2Q99958 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
FOXC2Q99958 MIR8076-201ENST00000611401 83 ntBASIC1.27□□□□□ -2.21
FOXC2Q99958 AC090617.10-201ENST00000624308 134 ntBASIC1.27□□□□□ -2.21
FOXC2Q99958 AC073869.6-201ENST00000640656 341 ntBASIC1.27□□□□□ -2.21
FOXC2Q99958 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
FOXC2Q99958 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
FOXC2Q99958 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.26□□□□□ -2.21
FOXC2Q99958 Y_RNA.36-201ENST00000362602 112 ntBASIC1.26□□□□□ -2.21
FOXC2Q99958 RNU4-13P-201ENST00000364019 141 ntBASIC1.26□□□□□ -2.21
FOXC2Q99958 Y_RNA.295-201ENST00000364918 102 ntBASIC1.26□□□□□ -2.21
FOXC2Q99958 Y_RNA.354-201ENST00000365448 111 ntBASIC1.26□□□□□ -2.21
FOXC2Q99958 RNU6-438P-201ENST00000365561 103 ntBASIC1.26□□□□□ -2.21
FOXC2Q99958 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.26□□□□□ -2.21
FOXC2Q99958 RNU6-1286P-201ENST00000383871 107 ntBASIC1.26□□□□□ -2.21
FOXC2Q99958 Y_RNA.414-201ENST00000384011 101 ntBASIC1.26□□□□□ -2.21
FOXC2Q99958 Y_RNA.504-201ENST00000384481 104 ntBASIC1.26□□□□□ -2.21
FOXC2Q99958 RNU6-296P-201ENST00000384608 107 ntBASIC1.26□□□□□ -2.21
FOXC2Q99958 RNU6-1106P-201ENST00000390845 107 ntBASIC1.26□□□□□ -2.21
FOXC2Q99958 SNORD115-47-201ENST00000391226 86 ntBASIC1.26□□□□□ -2.21
FOXC2Q99958 RNU2-41P-201ENST00000410991 178 ntBASIC1.26□□□□□ -2.21
FOXC2Q99958 MTND1P4-201ENST00000435196 415 ntBASIC1.26□□□□□ -2.21
FOXC2Q99958 RNU7-187P-201ENST00000458985 68 ntBASIC1.26□□□□□ -2.21
FOXC2Q99958 MTCO1P29-201ENST00000496868 288 ntBASIC1.26□□□□□ -2.21
FOXC2Q99958 HMGN1P13-201ENST00000505795 138 ntBASIC1.26□□□□□ -2.21
FOXC2Q99958 AC096745.1-201ENST00000509945 370 ntBASIC1.26□□□□□ -2.21
FOXC2Q99958 RNU6-864P-201ENST00000516256 108 ntBASIC1.26□□□□□ -2.21
FOXC2Q99958 RNU6-256P-201ENST00000516747 97 ntBASIC1.26□□□□□ -2.21
FOXC2Q99958 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.26□□□□□ -2.21
FOXC2Q99958 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.26□□□□□ -2.21
FOXC2Q99958 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.26□□□□□ -2.21
FOXC2Q99958 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.26□□□□□ -2.21
FOXC2Q99958 SNORA77B-201ENST00000578179 125 ntBASIC1.26□□□□□ -2.21
FOXC2Q99958 AC068790.6-201ENST00000602558 258 ntBASIC1.26□□□□□ -2.21
FOXC2Q99958 RPL17P51-201ENST00000605218 238 ntBASIC1.26□□□□□ -2.21
FOXC2Q99958 AL136221.1-201ENST00000621449 509 ntBASIC1.26□□□□□ -2.21
FOXC2Q99958 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.26□□□□□ -2.21
FOXC2Q99958 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.26□□□□□ -2.21
FOXC2Q99958 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
FOXC2Q99958 AP000648.3-201ENST00000623539 4507 ntBASIC1.25□□□□□ -2.21
FOXC2Q99958 AC009541.1-201ENST00000438279 2662 ntBASIC1.25□□□□□ -2.21
FOXC2Q99958 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
FOXC2Q99958 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
FOXC2Q99958 RNU1-76P-201ENST00000362903 159 ntBASIC1.25□□□□□ -2.21
FOXC2Q99958 SNORD50.1-201ENST00000362987 71 ntBASIC1.25□□□□□ -2.21
FOXC2Q99958 Y_RNA.157-201ENST00000363638 102 ntBASIC1.25□□□□□ -2.21
FOXC2Q99958 SNORA32.2-201ENST00000384049 122 ntBASIC1.25□□□□□ -2.21
FOXC2Q99958 Y_RNA.505-201ENST00000384489 102 ntBASIC1.25□□□□□ -2.21
FOXC2Q99958 RNU6-831P-201ENST00000384548 107 ntBASIC1.25□□□□□ -2.21
FOXC2Q99958 Y_RNA.573-201ENST00000384763 105 ntBASIC1.25□□□□□ -2.21
FOXC2Q99958 RNU6-192P-201ENST00000391253 100 ntBASIC1.25□□□□□ -2.21
FOXC2Q99958 MIR1323-201ENST00000408090 73 ntBASIC1.25□□□□□ -2.21
FOXC2Q99958 AC139712.2-201ENST00000424302 339 ntBASIC1.25□□□□□ -2.21
FOXC2Q99958 MTND3P9-201ENST00000429526 346 ntBASIC1.25□□□□□ -2.21
FOXC2Q99958 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.25□□□□□ -2.21
FOXC2Q99958 AC079354.2-201ENST00000453523 154 ntBASIC1.25□□□□□ -2.21
FOXC2Q99958 U8.21-201ENST00000459536 136 ntBASIC1.25□□□□□ -2.21
FOXC2Q99958 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.25□□□□□ -2.21
FOXC2Q99958 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC1.25□□□□□ -2.21
FOXC2Q99958 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.25□□□□□ -2.21
FOXC2Q99958 RNU6-567P-201ENST00000516746 107 ntBASIC1.25□□□□□ -2.21
FOXC2Q99958 RNU6-1314P-201ENST00000517139 104 ntBASIC1.25□□□□□ -2.21
FOXC2Q99958 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.25□□□□□ -2.21
FOXC2Q99958 MRPS36P4-201ENST00000534436 298 ntBASIC1.25□□□□□ -2.21
FOXC2Q99958 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.25□□□□□ -2.21
FOXC2Q99958 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.25□□□□□ -2.21
FOXC2Q99958 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC1.25□□□□□ -2.21
FOXC2Q99958 MIR3942-201ENST00000585264 109 ntBASIC1.25□□□□□ -2.21
FOXC2Q99958 AC007014.2-201ENST00000615581 479 ntBASIC1.25□□□□□ -2.21
FOXC2Q99958 AC002553.4-201ENST00000616896 331 ntBASIC1.25□□□□□ -2.21
FOXC2Q99958 AC006504.8-201ENST00000621046 635 ntBASIC1.25□□□□□ -2.21
FOXC2Q99958 AC068205.3-201ENST00000636385 468 ntBASIC1.25□□□□□ -2.21
FOXC2Q99958 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.25□□□□□ -2.21
FOXC2Q99958 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
FOXC2Q99958 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
FOXC2Q99958 RNU6-1252P-201ENST00000363054 104 ntBASIC1.24□□□□□ -2.21
FOXC2Q99958 RNU6-414P-201ENST00000363705 104 ntBASIC1.24□□□□□ -2.21
FOXC2Q99958 RNU6-271P-201ENST00000363858 105 ntBASIC1.24□□□□□ -2.21
FOXC2Q99958 SNORD31B-201ENST00000364977 69 ntBASIC1.24□□□□□ -2.21
FOXC2Q99958 Y_RNA.301-201ENST00000364990 103 ntBASIC1.24□□□□□ -2.21
FOXC2Q99958 SNORD116-11-201ENST00000383882 92 ntBASIC1.24□□□□□ -2.21
FOXC2Q99958 Y_RNA.453-201ENST00000384223 109 ntBASIC1.24□□□□□ -2.21
FOXC2Q99958 RNU6-360P-201ENST00000390944 104 ntBASIC1.24□□□□□ -2.21
FOXC2Q99958 SNORA12.2-201ENST00000391040 156 ntBASIC1.24□□□□□ -2.21
FOXC2Q99958 MIR1277-201ENST00000408536 78 ntBASIC1.24□□□□□ -2.21
FOXC2Q99958 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.24□□□□□ -2.21
FOXC2Q99958 EIF1P1-201ENST00000421436 341 ntBASIC1.24□□□□□ -2.21
FOXC2Q99958 AL590632.1-201ENST00000424289 371 ntBASIC1.24□□□□□ -2.21
FOXC2Q99958 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.24□□□□□ -2.21
FOXC2Q99958 AL354695.1-201ENST00000427935 228 ntBASIC1.24□□□□□ -2.21
FOXC2Q99958 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.24□□□□□ -2.21
FOXC2Q99958 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms