Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.15□□□□□ -1.9
CDK5RAP1Q96SZ6 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CDK5RAP1Q96SZ6 RNU6-1048P-201ENST00000364054 107 ntBASIC3.15□□□□□ -1.91
CDK5RAP1Q96SZ6 Y_RNA.329-201ENST00000365209 107 ntBASIC3.15□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU1-100P-201ENST00000365255 165 ntBASIC3.15□□□□□ -1.91
CDK5RAP1Q96SZ6 SNORA40-201ENST00000388090 126 ntBASIC3.15□□□□□ -1.91
CDK5RAP1Q96SZ6 NDUFB4P4-201ENST00000404822 243 ntBASIC3.15□□□□□ -1.91
CDK5RAP1Q96SZ6 AC074117.2-201ENST00000417130 397 ntBASIC3.15□□□□□ -1.91
CDK5RAP1Q96SZ6 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.15□□□□□ -1.91
CDK5RAP1Q96SZ6 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC3.15□□□□□ -1.91
CDK5RAP1Q96SZ6 AC009237.8-201ENST00000445492 379 ntBASIC3.15□□□□□ -1.91
CDK5RAP1Q96SZ6 AC091179.3-201ENST00000474761 144 ntBASIC3.15□□□□□ -1.91
CDK5RAP1Q96SZ6 RPL30P14-201ENST00000482744 348 ntBASIC3.15□□□□□ -1.91
CDK5RAP1Q96SZ6 RPS29P20-201ENST00000489592 171 ntBASIC3.15□□□□□ -1.91
CDK5RAP1Q96SZ6 Y_RNA.686-201ENST00000516548 134 ntBASIC3.15□□□□□ -1.91
CDK5RAP1Q96SZ6 SNORA31.16-201ENST00000516773 139 ntBASIC3.15□□□□□ -1.91
CDK5RAP1Q96SZ6 RN7SKP282-201ENST00000516824 299 ntBASIC3.15□□□□□ -1.91
CDK5RAP1Q96SZ6 AC245166.1-201ENST00000521012 253 ntBASIC3.15□□□□□ -1.91
CDK5RAP1Q96SZ6 AC100767.1-201ENST00000528178 123 ntBASIC3.15□□□□□ -1.91
CDK5RAP1Q96SZ6 AC112693.2-201ENST00000556538 232 ntBASIC3.15□□□□□ -1.91
CDK5RAP1Q96SZ6 MIR3684-201ENST00000579779 74 ntBASIC3.15□□□□□ -1.91
CDK5RAP1Q96SZ6 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.15□□□□□ -1.91
CDK5RAP1Q96SZ6 AC024581.2-201ENST00000619986 252 ntBASIC3.15□□□□□ -1.91
CDK5RAP1Q96SZ6 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.15□□□□□ -1.91
CDK5RAP1Q96SZ6 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.15□□□□□ -1.91
CDK5RAP1Q96SZ6 U2.21-201ENST00000637295 81 ntBASIC3.15□□□□□ -1.91
CDK5RAP1Q96SZ6 AC008568.2-201ENST00000623862 2313 ntBASIC3.15□□□□□ -1.91
CDK5RAP1Q96SZ6 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
CDK5RAP1Q96SZ6 AC134026.1-201ENST00000623249 2239 ntBASIC3.14□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU6-778P-201ENST00000363269 103 ntBASIC3.14□□□□□ -1.91
CDK5RAP1Q96SZ6 RNY1P11-201ENST00000363759 113 ntBASIC3.14□□□□□ -1.91
CDK5RAP1Q96SZ6 Y_RNA.273-201ENST00000364703 102 ntBASIC3.14□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU6-275P-201ENST00000364910 107 ntBASIC3.14□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU6-142P-201ENST00000384019 107 ntBASIC3.14□□□□□ -1.91
CDK5RAP1Q96SZ6 Y_RNA.498-201ENST00000384460 102 ntBASIC3.14□□□□□ -1.91
CDK5RAP1Q96SZ6 Y_RNA.542-201ENST00000384641 111 ntBASIC3.14□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU6-239P-201ENST00000390990 99 ntBASIC3.14□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU6-381P-201ENST00000391259 108 ntBASIC3.14□□□□□ -1.91
CDK5RAP1Q96SZ6 RN7SKP123-201ENST00000410732 291 ntBASIC3.14□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU6-1245P-201ENST00000411130 106 ntBASIC3.14□□□□□ -1.91
CDK5RAP1Q96SZ6 AL358075.3-201ENST00000426289 226 ntBASIC3.14□□□□□ -1.91
CDK5RAP1Q96SZ6 AC112220.1-201ENST00000434628 355 ntBASIC3.14□□□□□ -1.91
CDK5RAP1Q96SZ6 Y_RNA.797-201ENST00000515977 94 ntBASIC3.14□□□□□ -1.91
CDK5RAP1Q96SZ6 RNA5SP291-201ENST00000517222 105 ntBASIC3.14□□□□□ -1.91
CDK5RAP1Q96SZ6 AC019159.1-201ENST00000605094 187 ntBASIC3.14□□□□□ -1.91
CDK5RAP1Q96SZ6 AL359198.2-201ENST00000611836 194 ntBASIC3.14□□□□□ -1.91
CDK5RAP1Q96SZ6 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.14□□□□□ -1.91
CDK5RAP1Q96SZ6 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.14□□□□□ -1.91
CDK5RAP1Q96SZ6 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDK5RAP1Q96SZ6 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDK5RAP1Q96SZ6 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDK5RAP1Q96SZ6 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDK5RAP1Q96SZ6 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CDK5RAP1Q96SZ6 AC096644.4-201ENST00000563417 2912 ntBASIC3.13□□□□□ -1.91
CDK5RAP1Q96SZ6 AC073325.2-201ENST00000339545 159 ntBASIC3.13□□□□□ -1.91
CDK5RAP1Q96SZ6 SNORD115-8-201ENST00000363856 82 ntBASIC3.13□□□□□ -1.91
CDK5RAP1Q96SZ6 SNORD115-38-201ENST00000365037 82 ntBASIC3.13□□□□□ -1.91
CDK5RAP1Q96SZ6 CD24P4-201ENST00000382840 243 ntBASIC3.13□□□□□ -1.91
CDK5RAP1Q96SZ6 SNORD116-14-201ENST00000383894 92 ntBASIC3.13□□□□□ -1.91
CDK5RAP1Q96SZ6 SNORD116-17-201ENST00000383929 92 ntBASIC3.13□□□□□ -1.91
CDK5RAP1Q96SZ6 SNORD116-15-201ENST00000384445 92 ntBASIC3.13□□□□□ -1.91
CDK5RAP1Q96SZ6 SNORD116-19-201ENST00000384729 92 ntBASIC3.13□□□□□ -1.91
CDK5RAP1Q96SZ6 MIR493-201ENST00000385254 89 ntBASIC3.13□□□□□ -1.91
CDK5RAP1Q96SZ6 SNORA26.5-201ENST00000391215 123 ntBASIC3.13□□□□□ -1.91
CDK5RAP1Q96SZ6 AL512633.1-201ENST00000399931 655 ntBASIC3.13□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.13□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU2-52P-201ENST00000410680 190 ntBASIC3.13□□□□□ -1.91
CDK5RAP1Q96SZ6 AC010154.1-201ENST00000425857 269 ntBASIC3.13□□□□□ -1.91
CDK5RAP1Q96SZ6 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.13□□□□□ -1.91
CDK5RAP1Q96SZ6 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.13□□□□□ -1.91
CDK5RAP1Q96SZ6 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.13□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU6-581P-201ENST00000516214 105 ntBASIC3.13□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU6-453P-201ENST00000516819 85 ntBASIC3.13□□□□□ -1.91
CDK5RAP1Q96SZ6 SNORA31.23-201ENST00000517219 133 ntBASIC3.13□□□□□ -1.91
CDK5RAP1Q96SZ6 AC022616.8-201ENST00000533569 253 ntBASIC3.13□□□□□ -1.91
CDK5RAP1Q96SZ6 MIR3529-201ENST00000637713 78 ntBASIC3.13□□□□□ -1.91
CDK5RAP1Q96SZ6 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
CDK5RAP1Q96SZ6 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.13□□□□□ -1.91
CDK5RAP1Q96SZ6 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDK5RAP1Q96SZ6 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.12□□□□□ -1.91
CDK5RAP1Q96SZ6 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.12□□□□□ -1.91
CDK5RAP1Q96SZ6 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDK5RAP1Q96SZ6 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CDK5RAP1Q96SZ6 Y_RNA.179-201ENST00000363844 90 ntBASIC3.12□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU6-801P-201ENST00000364087 105 ntBASIC3.12□□□□□ -1.91
CDK5RAP1Q96SZ6 SNORA9.2-201ENST00000365361 133 ntBASIC3.12□□□□□ -1.91
CDK5RAP1Q96SZ6 Y_RNA.420-201ENST00000384043 110 ntBASIC3.12□□□□□ -1.91
CDK5RAP1Q96SZ6 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC3.12□□□□□ -1.91
CDK5RAP1Q96SZ6 RPS20P10-201ENST00000451209 253 ntBASIC3.12□□□□□ -1.91
CDK5RAP1Q96SZ6 AC146507.2-201ENST00000460608 476 ntBASIC3.12□□□□□ -1.91
CDK5RAP1Q96SZ6 RN7SL20P-201ENST00000488827 297 ntBASIC3.12□□□□□ -1.91
CDK5RAP1Q96SZ6 SCARNA8-201ENST00000515924 131 ntBASIC3.12□□□□□ -1.91
CDK5RAP1Q96SZ6 RNU7-121P-201ENST00000516604 62 ntBASIC3.12□□□□□ -1.91
CDK5RAP1Q96SZ6 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.12□□□□□ -1.91
CDK5RAP1Q96SZ6 AC021269.2-201ENST00000532318 330 ntBASIC3.12□□□□□ -1.91
CDK5RAP1Q96SZ6 AL451007.1-201ENST00000595491 289 ntBASIC3.12□□□□□ -1.91
CDK5RAP1Q96SZ6 AL138963.2-201ENST00000605137 226 ntBASIC3.12□□□□□ -1.91
CDK5RAP1Q96SZ6 AC069294.1-201ENST00000608397 350 ntBASIC3.12□□□□□ -1.91
CDK5RAP1Q96SZ6 FTX_3.1-201ENST00000610451 147 ntBASIC3.12□□□□□ -1.91
CDK5RAP1Q96SZ6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms