Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 MIR548X2-201ENST00000579776 100 ntBASIC3.75□□□□□ -1.81
SYNGAP1Q96PV0 AC005562.2-201ENST00000618264 111 ntBASIC3.75□□□□□ -1.81
SYNGAP1Q96PV0 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.75□□□□□ -1.81
SYNGAP1Q96PV0 AL513302.2-201ENST00000562313 1842 ntBASIC3.75□□□□□ -1.81
SYNGAP1Q96PV0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.75□□□□□ -1.81
SYNGAP1Q96PV0 AC092435.3-201ENST00000565538 3654 ntBASIC3.75□□□□□ -1.81
SYNGAP1Q96PV0 AC010329.5-201ENST00000623497 2174 ntBASIC3.75□□□□□ -1.81
SYNGAP1Q96PV0 RNU4-82P-201ENST00000362443 140 ntBASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 RNU6-801P-201ENST00000364087 105 ntBASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 Y_RNA.287-201ENST00000364853 94 ntBASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 RNU6-275P-201ENST00000364910 107 ntBASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 RNU4-11P-201ENST00000365287 132 ntBASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 SNORA18.2-201ENST00000383865 132 ntBASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 RNU6-1168P-201ENST00000390831 104 ntBASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 SNORA26.5-201ENST00000391215 123 ntBASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 MIR513C-201ENST00000401352 84 ntBASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 RNU6-257P-201ENST00000410238 98 ntBASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 AL159169.1-201ENST00000421119 127 ntBASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 AL353705.1-201ENST00000433468 480 ntBASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 RNU6-1007P-201ENST00000516586 107 ntBASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 SNORA70.19-201ENST00000516717 90 ntBASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 HSPE1P18-201ENST00000517602 280 ntBASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 AC100767.1-201ENST00000528178 123 ntBASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 RPS15AP11-201ENST00000594193 385 ntBASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 PCGEM1.1-201ENST00000613431 131 ntBASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 AP006437.1-201ENST00000641440 3685 ntBASIC3.74□□□□□ -1.81
SYNGAP1Q96PV0 MIR422A-201ENST00000362286 90 ntBASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 Y_RNA.40-201ENST00000362645 93 ntBASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 RNU6-199P-201ENST00000362954 107 ntBASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 SNORD114-19-201ENST00000363072 75 ntBASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 AP002088.1-201ENST00000382740 395 ntBASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 Y_RNA.466-201ENST00000384294 113 ntBASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 SNORA20-201ENST00000384662 132 ntBASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 AL031003.1-201ENST00000404229 172 ntBASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 AL591034.1-201ENST00000407447 340 ntBASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 RNU6-855P-201ENST00000410395 104 ntBASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 RPL23AP62-201ENST00000463396 453 ntBASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 AC010401.1-201ENST00000463867 348 ntBASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 RPL30P14-201ENST00000482744 348 ntBASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 RNU1-61P-201ENST00000516107 151 ntBASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 AC136628.3-201ENST00000521868 290 ntBASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 DEFB131C-201ENST00000528817 165 ntBASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 MIR4744-201ENST00000581563 82 ntBASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 AC090616.3-201ENST00000582184 217 ntBASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 HSPE1P7-201ENST00000604681 321 ntBASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 AC010332.2-201ENST00000613083 1904 ntBASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.73□□□□□ -1.81
SYNGAP1Q96PV0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
SYNGAP1Q96PV0 Y_RNA.24-201ENST00000362508 103 ntBASIC3.72□□□□□ -1.81
SYNGAP1Q96PV0 U3.9-201ENST00000363823 204 ntBASIC3.72□□□□□ -1.81
SYNGAP1Q96PV0 SNORA8.3-201ENST00000384679 139 ntBASIC3.72□□□□□ -1.81
SYNGAP1Q96PV0 MIR569-201ENST00000385228 96 ntBASIC3.72□□□□□ -1.81
SYNGAP1Q96PV0 RNU6-578P-201ENST00000390980 103 ntBASIC3.72□□□□□ -1.81
SYNGAP1Q96PV0 RNU6-381P-201ENST00000391259 108 ntBASIC3.72□□□□□ -1.81
SYNGAP1Q96PV0 EBAG9P1-201ENST00000418955 543 ntBASIC3.72□□□□□ -1.81
SYNGAP1Q96PV0 RN7SL863P-201ENST00000462370 296 ntBASIC3.72□□□□□ -1.81
SYNGAP1Q96PV0 TRBV12-1-201ENST00000479785 344 ntBASIC3.72□□□□□ -1.81
SYNGAP1Q96PV0 AC145146.1-201ENST00000496370 254 ntBASIC3.72□□□□□ -1.81
SYNGAP1Q96PV0 RN7SKP164-201ENST00000516138 266 ntBASIC3.72□□□□□ -1.81
SYNGAP1Q96PV0 RNU1-41P-201ENST00000516161 162 ntBASIC3.72□□□□□ -1.81
SYNGAP1Q96PV0 RNU1-48P-201ENST00000516400 162 ntBASIC3.72□□□□□ -1.81
SYNGAP1Q96PV0 EIF4A1P12-201ENST00000551910 141 ntBASIC3.72□□□□□ -1.81
SYNGAP1Q96PV0 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC3.72□□□□□ -1.81
SYNGAP1Q96PV0 AC091152.3-201ENST00000604227 325 ntBASIC3.72□□□□□ -1.81
SYNGAP1Q96PV0 AC005520.5-201ENST00000613926 164 ntBASIC3.72□□□□□ -1.81
SYNGAP1Q96PV0 TCL6_2.1-201ENST00000615162 119 ntBASIC3.72□□□□□ -1.81
SYNGAP1Q96PV0 AC013791.1-201ENST00000616619 62 ntBASIC3.72□□□□□ -1.81
SYNGAP1Q96PV0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.72□□□□□ -1.81
SYNGAP1Q96PV0 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
SYNGAP1Q96PV0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.72□□□□□ -1.81
SYNGAP1Q96PV0 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
SYNGAP1Q96PV0 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
SYNGAP1Q96PV0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SYNGAP1Q96PV0 RNU1-70P-201ENST00000362618 164 ntBASIC3.71□□□□□ -1.81
SYNGAP1Q96PV0 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.71□□□□□ -1.81
SYNGAP1Q96PV0 Y_RNA.572-201ENST00000384757 98 ntBASIC3.71□□□□□ -1.81
SYNGAP1Q96PV0 SNORA40-201ENST00000388090 126 ntBASIC3.71□□□□□ -1.81
SYNGAP1Q96PV0 SNORD37.2-201ENST00000391075 66 ntBASIC3.71□□□□□ -1.81
SYNGAP1Q96PV0 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
SYNGAP1Q96PV0 AC023141.4-201ENST00000412031 328 ntBASIC3.71□□□□□ -1.81
SYNGAP1Q96PV0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.81
SYNGAP1Q96PV0 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.71□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms