Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AC011195.1-201ENST00000578177 177 ntBASIC0.15□□□□□ -2.39
CCDC42Q96M95 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.15□□□□□ -2.39
CCDC42Q96M95 AC138749.5-201ENST00000611461 208 ntBASIC0.15□□□□□ -2.39
CCDC42Q96M95 AL607023.1-201ENST00000620045 248 ntBASIC0.15□□□□□ -2.39
CCDC42Q96M95 AC027514.1-201ENST00000588561 1603 ntBASIC0.15□□□□□ -2.39
CCDC42Q96M95 SNORA36.2-201ENST00000384004 127 ntBASIC0.14□□□□□ -2.39
CCDC42Q96M95 RNU6-342P-201ENST00000384521 104 ntBASIC0.14□□□□□ -2.39
CCDC42Q96M95 RNU6-1242P-201ENST00000391052 103 ntBASIC0.14□□□□□ -2.39
CCDC42Q96M95 RNU6-1186P-201ENST00000410429 97 ntBASIC0.14□□□□□ -2.39
CCDC42Q96M95 RNA5SP222-201ENST00000411039 105 ntBASIC0.14□□□□□ -2.39
CCDC42Q96M95 AC106883.1-201ENST00000418805 562 ntBASIC0.14□□□□□ -2.39
CCDC42Q96M95 MTCYBP10-201ENST00000424905 650 ntBASIC0.14□□□□□ -2.39
CCDC42Q96M95 RPS20P10-201ENST00000451209 253 ntBASIC0.14□□□□□ -2.39
CCDC42Q96M95 MTCO3P8-201ENST00000453691 755 ntBASIC0.14□□□□□ -2.39
CCDC42Q96M95 OR9P1P-201ENST00000496431 281 ntBASIC0.14□□□□□ -2.39
CCDC42Q96M95 MTND2P31-201ENST00000512602 616 ntBASIC0.14□□□□□ -2.39
CCDC42Q96M95 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.14□□□□□ -2.39
CCDC42Q96M95 RNU7-99P-201ENST00000516271 62 ntBASIC0.14□□□□□ -2.39
CCDC42Q96M95 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.14□□□□□ -2.39
CCDC42Q96M95 AC234772.3-201ENST00000602277 528 ntBASIC0.14□□□□□ -2.39
CCDC42Q96M95 AP000907.4-201ENST00000604143 237 ntBASIC0.14□□□□□ -2.39
CCDC42Q96M95 AL136317.1-201ENST00000612653 226 ntBASIC0.14□□□□□ -2.39
CCDC42Q96M95 AC009159.2-201ENST00000617603 606 ntBASIC0.14□□□□□ -2.39
CCDC42Q96M95 AL138960.2-201ENST00000625145 535 ntBASIC0.14□□□□□ -2.39
CCDC42Q96M95 AL589743.1-201ENST00000551932 2712 ntBASIC0.13□□□□□ -2.39
CCDC42Q96M95 RNU6-349P-201ENST00000362402 107 ntBASIC0.13□□□□□ -2.39
CCDC42Q96M95 Y_RNA.330-201ENST00000365230 109 ntBASIC0.13□□□□□ -2.39
CCDC42Q96M95 SNORA67.2-201ENST00000384300 149 ntBASIC0.13□□□□□ -2.39
CCDC42Q96M95 RNU6-636P-201ENST00000384598 107 ntBASIC0.13□□□□□ -2.39
CCDC42Q96M95 MTCO1P19-201ENST00000443487 500 ntBASIC0.13□□□□□ -2.39
CCDC42Q96M95 TPT1P7-201ENST00000458300 517 ntBASIC0.13□□□□□ -2.39
CCDC42Q96M95 AC023827.1-201ENST00000569247 97 ntBASIC0.13□□□□□ -2.39
CCDC42Q96M95 AC069431.2-201ENST00000604149 1099 ntBASIC0.13□□□□□ -2.39
CCDC42Q96M95 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.13□□□□□ -2.39
CCDC42Q96M95 U6.73-201ENST00000619194 103 ntBASIC0.13□□□□□ -2.39
CCDC42Q96M95 MIR6734-201ENST00000621166 68 ntBASIC0.13□□□□□ -2.39
CCDC42Q96M95 AC008873.1-201ENST00000625051 138 ntBASIC0.13□□□□□ -2.39
CCDC42Q96M95 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
CCDC42Q96M95 RNA5SP264-201ENST00000363115 107 ntBASIC0.12□□□□□ -2.39
CCDC42Q96M95 SNORA20.2-201ENST00000383922 131 ntBASIC0.12□□□□□ -2.39
CCDC42Q96M95 RNU6-793P-201ENST00000384233 104 ntBASIC0.12□□□□□ -2.39
CCDC42Q96M95 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC0.12□□□□□ -2.39
CCDC42Q96M95 MRPS18CP6-201ENST00000423587 223 ntBASIC0.12□□□□□ -2.39
CCDC42Q96M95 CALM2P4-201ENST00000430810 426 ntBASIC0.12□□□□□ -2.39
CCDC42Q96M95 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.12□□□□□ -2.39
CCDC42Q96M95 AC104332.1-201ENST00000440471 797 ntBASIC0.12□□□□□ -2.39
CCDC42Q96M95 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC0.12□□□□□ -2.39
CCDC42Q96M95 SNRPGP9-201ENST00000456025 225 ntBASIC0.12□□□□□ -2.39
CCDC42Q96M95 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.12□□□□□ -2.39
CCDC42Q96M95 SNORD111.1-201ENST00000516421 86 ntBASIC0.12□□□□□ -2.39
CCDC42Q96M95 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
CCDC42Q96M95 SEPT14P17-201ENST00000617978 177 ntBASIC0.12□□□□□ -2.39
CCDC42Q96M95 AC068792.1-201ENST00000621354 417 ntBASIC0.12□□□□□ -2.39
CCDC42Q96M95 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.12□□□□□ -2.39
CCDC42Q96M95 AC009878.1-201ENST00000621819 340 ntBASIC0.12□□□□□ -2.39
CCDC42Q96M95 AL078596.1-201ENST00000624856 447 ntBASIC0.12□□□□□ -2.39
CCDC42Q96M95 RNU6-169P-201ENST00000365336 107 ntBASIC0.11□□□□□ -2.39
CCDC42Q96M95 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
CCDC42Q96M95 U8.16-201ENST00000391279 133 ntBASIC0.11□□□□□ -2.39
CCDC42Q96M95 AC093019.1-201ENST00000443135 252 ntBASIC0.11□□□□□ -2.39
CCDC42Q96M95 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC0.11□□□□□ -2.39
CCDC42Q96M95 AC010493.1-201ENST00000513479 292 ntBASIC0.11□□□□□ -2.39
CCDC42Q96M95 Y_RNA.672-201ENST00000516289 104 ntBASIC0.11□□□□□ -2.39
CCDC42Q96M95 AC100810.6-201ENST00000638068 285 ntBASIC0.11□□□□□ -2.39
CCDC42Q96M95 RNU6-434P-201ENST00000384376 107 ntBASIC0.1□□□□□ -2.39
CCDC42Q96M95 RNU6-393P-201ENST00000384475 107 ntBASIC0.1□□□□□ -2.39
CCDC42Q96M95 MIR140-201ENST00000385282 100 ntBASIC0.1□□□□□ -2.39
CCDC42Q96M95 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC0.1□□□□□ -2.39
CCDC42Q96M95 AC004854.1-201ENST00000440356 349 ntBASIC0.1□□□□□ -2.39
CCDC42Q96M95 AC093850.1-201ENST00000454121 251 ntBASIC0.1□□□□□ -2.39
CCDC42Q96M95 RNU2-69P-201ENST00000516061 100 ntBASIC0.1□□□□□ -2.39
CCDC42Q96M95 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.1□□□□□ -2.39
CCDC42Q96M95 AC016957.1-201ENST00000534895 309 ntBASIC0.1□□□□□ -2.39
CCDC42Q96M95 MIR3192-201ENST00000584920 77 ntBASIC0.1□□□□□ -2.39
CCDC42Q96M95 RSL24D1P11-201ENST00000591045 491 ntBASIC0.1□□□□□ -2.39
CCDC42Q96M95 AC068790.2-201ENST00000602601 557 ntBASIC0.1□□□□□ -2.39
CCDC42Q96M95 AC025449.1-201ENST00000603896 529 ntBASIC0.1□□□□□ -2.39
CCDC42Q96M95 AC002044.1-201ENST00000606707 158 ntBASIC0.1□□□□□ -2.39
CCDC42Q96M95 RNU5F-6P-201ENST00000362979 116 ntBASIC0.09□□□□□ -2.4
CCDC42Q96M95 RNU5B-2P-201ENST00000363036 113 ntBASIC0.09□□□□□ -2.4
CCDC42Q96M95 RNY1P8-201ENST00000383970 114 ntBASIC0.09□□□□□ -2.4
CCDC42Q96M95 RNU6-177P-201ENST00000411257 104 ntBASIC0.09□□□□□ -2.4
CCDC42Q96M95 AL596276.1-201ENST00000434465 418 ntBASIC0.09□□□□□ -2.4
CCDC42Q96M95 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.09□□□□□ -2.4
CCDC42Q96M95 AC067940.1-201ENST00000458411 300 ntBASIC0.09□□□□□ -2.4
CCDC42Q96M95 AC007215.1-201ENST00000464893 276 ntBASIC0.09□□□□□ -2.4
CCDC42Q96M95 RNU6-323P-201ENST00000521915 107 ntBASIC0.09□□□□□ -2.4
CCDC42Q96M95 AC005771.1-201ENST00000585581 349 ntBASIC0.09□□□□□ -2.4
CCDC42Q96M95 SNRPGP20-201ENST00000604477 205 ntBASIC0.09□□□□□ -2.4
CCDC42Q96M95 AL138726.1-201ENST00000614873 333 ntBASIC0.09□□□□□ -2.4
CCDC42Q96M95 AC007014.2-201ENST00000615581 479 ntBASIC0.09□□□□□ -2.4
CCDC42Q96M95 RNU6-266P-201ENST00000364225 107 ntBASIC0.08□□□□□ -2.4
CCDC42Q96M95 Y_RNA.367-201ENST00000365544 101 ntBASIC0.08□□□□□ -2.4
CCDC42Q96M95 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC0.08□□□□□ -2.4
CCDC42Q96M95 MIR1295A-201ENST00000408463 79 ntBASIC0.08□□□□□ -2.4
CCDC42Q96M95 RNU4-46P-201ENST00000410818 138 ntBASIC0.08□□□□□ -2.4
CCDC42Q96M95 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC0.08□□□□□ -2.4
CCDC42Q96M95 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.08□□□□□ -2.4
CCDC42Q96M95 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.08□□□□□ -2.4
CCDC42Q96M95 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms