Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 RNU6-1062P-201ENST00000383908 107 ntBASIC2.67□□□□□ -1.98
VCPIP1Q96JH7 RNU6-142P-201ENST00000384019 107 ntBASIC2.67□□□□□ -1.98
VCPIP1Q96JH7 Y_RNA.462-201ENST00000384268 102 ntBASIC2.67□□□□□ -1.98
VCPIP1Q96JH7 RNU6-318P-201ENST00000384283 103 ntBASIC2.67□□□□□ -1.98
VCPIP1Q96JH7 Y_RNA.504-201ENST00000384481 104 ntBASIC2.67□□□□□ -1.98
VCPIP1Q96JH7 RNU6-102P-201ENST00000384485 104 ntBASIC2.67□□□□□ -1.98
VCPIP1Q96JH7 MIR544A-201ENST00000384855 91 ntBASIC2.67□□□□□ -1.98
VCPIP1Q96JH7 MIR27B-201ENST00000385129 97 ntBASIC2.67□□□□□ -1.98
VCPIP1Q96JH7 MIR153-2-201ENST00000385225 87 ntBASIC2.67□□□□□ -1.98
VCPIP1Q96JH7 Y_RNA.581-201ENST00000391017 97 ntBASIC2.67□□□□□ -1.98
VCPIP1Q96JH7 EIF1P2-201ENST00000428233 350 ntBASIC2.67□□□□□ -1.98
VCPIP1Q96JH7 RPS15AP7-201ENST00000439294 405 ntBASIC2.67□□□□□ -1.98
VCPIP1Q96JH7 AP000705.1-201ENST00000454567 350 ntBASIC2.67□□□□□ -1.98
VCPIP1Q96JH7 SNORA81.3-201ENST00000517283 198 ntBASIC2.67□□□□□ -1.98
VCPIP1Q96JH7 AC103810.1-201ENST00000579873 453 ntBASIC2.67□□□□□ -1.98
VCPIP1Q96JH7 MIR3616-201ENST00000584070 92 ntBASIC2.67□□□□□ -1.98
VCPIP1Q96JH7 MIR3529-201ENST00000637713 78 ntBASIC2.67□□□□□ -1.98
VCPIP1Q96JH7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
VCPIP1Q96JH7 RNU6-280P-201ENST00000364145 104 ntBASIC2.66□□□□□ -1.98
VCPIP1Q96JH7 Y_RNA.269-201ENST00000364685 89 ntBASIC2.66□□□□□ -1.98
VCPIP1Q96JH7 Y_RNA.785-201ENST00000384290 109 ntBASIC2.66□□□□□ -1.98
VCPIP1Q96JH7 RNU4-61P-201ENST00000411243 107 ntBASIC2.66□□□□□ -1.98
VCPIP1Q96JH7 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.66□□□□□ -1.98
VCPIP1Q96JH7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.66□□□□□ -1.98
VCPIP1Q96JH7 Z98742.2-201ENST00000431564 187 ntBASIC2.66□□□□□ -1.98
VCPIP1Q96JH7 AL445305.1-201ENST00000432577 575 ntBASIC2.66□□□□□ -1.98
VCPIP1Q96JH7 UBL5P3-201ENST00000475112 231 ntBASIC2.66□□□□□ -1.98
VCPIP1Q96JH7 RNU1-41P-201ENST00000516161 162 ntBASIC2.66□□□□□ -1.98
VCPIP1Q96JH7 RNU1-48P-201ENST00000516400 162 ntBASIC2.66□□□□□ -1.98
VCPIP1Q96JH7 RNU5B-3P-201ENST00000516601 115 ntBASIC2.66□□□□□ -1.98
VCPIP1Q96JH7 AC109329.2-201ENST00000519658 482 ntBASIC2.66□□□□□ -1.98
VCPIP1Q96JH7 HSPE1P4-201ENST00000550617 308 ntBASIC2.66□□□□□ -1.98
VCPIP1Q96JH7 AC090897.2-201ENST00000581715 130 ntBASIC2.66□□□□□ -1.98
VCPIP1Q96JH7 BX284668.6-201ENST00000606899 438 ntBASIC2.66□□□□□ -1.98
VCPIP1Q96JH7 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.66□□□□□ -1.98
VCPIP1Q96JH7 MIR6817-201ENST00000615588 66 ntBASIC2.66□□□□□ -1.98
VCPIP1Q96JH7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.66□□□□□ -1.98
VCPIP1Q96JH7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.66□□□□□ -1.98
VCPIP1Q96JH7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.66□□□□□ -1.98
VCPIP1Q96JH7 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.65□□□□□ -1.98
VCPIP1Q96JH7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
VCPIP1Q96JH7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 RNA5SP361-201ENST00000362686 118 ntBASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 RNA5SP68-201ENST00000363885 119 ntBASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 Y_RNA.274-201ENST00000364714 101 ntBASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 Y_RNA.297-201ENST00000364950 91 ntBASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 DEFA7P-201ENST00000382676 285 ntBASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 MIR487A-201ENST00000385009 80 ntBASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 WARS2P1-201ENST00000429678 537 ntBASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 AC012308.1-201ENST00000451232 178 ntBASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 RPL30P12-201ENST00000474666 353 ntBASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 RPS23P5-201ENST00000495419 428 ntBASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 RNU6-237P-201ENST00000515985 71 ntBASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 RNU6-1114P-201ENST00000516022 107 ntBASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 RNU6-496P-201ENST00000516145 99 ntBASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 RNU4-71P-201ENST00000516258 113 ntBASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 CKS1BP7-201ENST00000522230 235 ntBASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 MIR5695-201ENST00000579717 85 ntBASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 RPS15AP11-201ENST00000594193 385 ntBASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 AC005296.1-201ENST00000616145 209 ntBASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 U4.3-201ENST00000621047 82 ntBASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 SNORA43.4-201ENST00000629559 138 ntBASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 MIR7515-201ENST00000637837 67 ntBASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
VCPIP1Q96JH7 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VCPIP1Q96JH7 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VCPIP1Q96JH7 RNU5B-2P-201ENST00000363036 113 ntBASIC2.64□□□□□ -1.99
VCPIP1Q96JH7 RNU1-139P-201ENST00000391307 165 ntBASIC2.64□□□□□ -1.99
VCPIP1Q96JH7 SNORD12B-201ENST00000410433 91 ntBASIC2.64□□□□□ -1.99
VCPIP1Q96JH7 RPL23AP95-201ENST00000426806 265 ntBASIC2.64□□□□□ -1.99
VCPIP1Q96JH7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.64□□□□□ -1.99
VCPIP1Q96JH7 GPM6BP3-201ENST00000442797 145 ntBASIC2.64□□□□□ -1.99
VCPIP1Q96JH7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.64□□□□□ -1.99
VCPIP1Q96JH7 AC112771.1-201ENST00000463581 102 ntBASIC2.64□□□□□ -1.99
VCPIP1Q96JH7 RNA5SP24-201ENST00000516478 95 ntBASIC2.64□□□□□ -1.99
VCPIP1Q96JH7 Y_RNA.700-201ENST00000516806 100 ntBASIC2.64□□□□□ -1.99
VCPIP1Q96JH7 UBL5P4-201ENST00000562584 236 ntBASIC2.64□□□□□ -1.99
VCPIP1Q96JH7 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.64□□□□□ -1.99
VCPIP1Q96JH7 AL356157.2-201ENST00000605122 111 ntBASIC2.64□□□□□ -1.99
VCPIP1Q96JH7 MIR7843-201ENST00000622274 79 ntBASIC2.64□□□□□ -1.99
VCPIP1Q96JH7 AC010297.1-201ENST00000623948 149 ntBASIC2.64□□□□□ -1.99
VCPIP1Q96JH7 AC064859.1-201ENST00000624741 174 ntBASIC2.64□□□□□ -1.99
VCPIP1Q96JH7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
VCPIP1Q96JH7 AL109809.4-201ENST00000603520 2185 ntBASIC2.64□□□□□ -1.99
VCPIP1Q96JH7 HAUS6P2-201ENST00000433254 2404 ntBASIC2.63□□□□□ -1.99
VCPIP1Q96JH7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.63□□□□□ -1.99
VCPIP1Q96JH7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
VCPIP1Q96JH7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
VCPIP1Q96JH7 Y_RNA.29-201ENST00000362570 113 ntBASIC2.63□□□□□ -1.99
VCPIP1Q96JH7 RNY1-201ENST00000364228 113 ntBASIC2.63□□□□□ -1.99
VCPIP1Q96JH7 Y_RNA.319-201ENST00000365138 92 ntBASIC2.63□□□□□ -1.99
VCPIP1Q96JH7 RNU6-487P-201ENST00000365430 104 ntBASIC2.63□□□□□ -1.99
VCPIP1Q96JH7 SNORA36A-201ENST00000384221 132 ntBASIC2.63□□□□□ -1.99
VCPIP1Q96JH7 SNORD63-201ENST00000384262 68 ntBASIC2.63□□□□□ -1.99
VCPIP1Q96JH7 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
VCPIP1Q96JH7 RNA5SP213-201ENST00000391031 106 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 533.3 ms