Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 RNU2-32P-201ENST00000411193 191 ntBASIC3.33□□□□□ -1.88
SHDQ96IW2 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SHDQ96IW2 AL513477.1-202ENST00000417061 214 ntBASIC3.33□□□□□ -1.88
SHDQ96IW2 AL353705.1-201ENST00000433468 480 ntBASIC3.33□□□□□ -1.88
SHDQ96IW2 AC009969.1-201ENST00000438726 172 ntBASIC3.33□□□□□ -1.88
SHDQ96IW2 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.33□□□□□ -1.88
SHDQ96IW2 RNU6-182P-201ENST00000516970 105 ntBASIC3.33□□□□□ -1.88
SHDQ96IW2 AC022616.8-201ENST00000533569 253 ntBASIC3.33□□□□□ -1.88
SHDQ96IW2 RPL21P9-201ENST00000556149 474 ntBASIC3.33□□□□□ -1.88
SHDQ96IW2 AL356280.1-201ENST00000603614 379 ntBASIC3.33□□□□□ -1.88
SHDQ96IW2 AL449363.1-201ENST00000617815 186 ntBASIC3.33□□□□□ -1.88
SHDQ96IW2 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHDQ96IW2 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHDQ96IW2 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHDQ96IW2 AC138915.1-201ENST00000565427 1685 ntBASIC3.33□□□□□ -1.88
SHDQ96IW2 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
SHDQ96IW2 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
SHDQ96IW2 AC017071.1-201ENST00000564407 2204 ntBASIC3.32□□□□□ -1.88
SHDQ96IW2 AC068647.1-201ENST00000489539 2265 ntBASIC3.32□□□□□ -1.88
SHDQ96IW2 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.32□□□□□ -1.88
SHDQ96IW2 RNU4-80P-201ENST00000363200 141 ntBASIC3.32□□□□□ -1.88
SHDQ96IW2 Y_RNA.785-201ENST00000384290 109 ntBASIC3.32□□□□□ -1.88
SHDQ96IW2 MIR95-201ENST00000385072 81 ntBASIC3.32□□□□□ -1.88
SHDQ96IW2 MT-TR-201ENST00000387439 65 ntBASIC3.32□□□□□ -1.88
SHDQ96IW2 AL031121.1-201ENST00000406553 254 ntBASIC3.32□□□□□ -1.88
SHDQ96IW2 RNU6-710P-201ENST00000410424 105 ntBASIC3.32□□□□□ -1.88
SHDQ96IW2 MTND5P15-201ENST00000434246 349 ntBASIC3.32□□□□□ -1.88
SHDQ96IW2 EEF1B2P7-201ENST00000451177 676 ntBASIC3.32□□□□□ -1.88
SHDQ96IW2 AL138752.1-201ENST00000452964 351 ntBASIC3.32□□□□□ -1.88
SHDQ96IW2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SHDQ96IW2 SNORA48.11-201ENST00000517015 89 ntBASIC3.32□□□□□ -1.88
SHDQ96IW2 AC093331.1-201ENST00000521474 169 ntBASIC3.32□□□□□ -1.88
SHDQ96IW2 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.32□□□□□ -1.88
SHDQ96IW2 AC130289.1-201ENST00000577321 73 ntBASIC3.32□□□□□ -1.88
SHDQ96IW2 DEFB117-201ENST00000602356 141 ntBASIC3.32□□□□□ -1.88
SHDQ96IW2 Six3os1_7.1-201ENST00000621512 201 ntBASIC3.32□□□□□ -1.88
SHDQ96IW2 AC009487.2-201ENST00000420969 6821 ntBASIC3.32□□□□□ -1.88
SHDQ96IW2 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.32□□□□□ -1.88
SHDQ96IW2 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.31□□□□□ -1.88
SHDQ96IW2 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.31□□□□□ -1.88
SHDQ96IW2 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHDQ96IW2 Y_RNA.82-201ENST00000363000 102 ntBASIC3.31□□□□□ -1.88
SHDQ96IW2 Y_RNA.83-201ENST00000363005 113 ntBASIC3.31□□□□□ -1.88
SHDQ96IW2 Y_RNA.92-201ENST00000363043 102 ntBASIC3.31□□□□□ -1.88
SHDQ96IW2 Y_RNA.235-201ENST00000364412 102 ntBASIC3.31□□□□□ -1.88
SHDQ96IW2 Y_RNA.306-201ENST00000365015 102 ntBASIC3.31□□□□□ -1.88
SHDQ96IW2 Y_RNA.312-201ENST00000365089 102 ntBASIC3.31□□□□□ -1.88
SHDQ96IW2 Y_RNA.322-201ENST00000365151 102 ntBASIC3.31□□□□□ -1.88
SHDQ96IW2 Y_RNA.329-201ENST00000365209 107 ntBASIC3.31□□□□□ -1.88
SHDQ96IW2 MIR1185-2-201ENST00000408687 86 ntBASIC3.31□□□□□ -1.88
SHDQ96IW2 RNU2-64P-201ENST00000411315 191 ntBASIC3.31□□□□□ -1.88
SHDQ96IW2 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.31□□□□□ -1.88
SHDQ96IW2 Y_RNA.650-201ENST00000459002 102 ntBASIC3.31□□□□□ -1.88
SHDQ96IW2 RNU7-57P-201ENST00000459540 60 ntBASIC3.31□□□□□ -1.88
SHDQ96IW2 SNORA70.12-201ENST00000516084 153 ntBASIC3.31□□□□□ -1.88
SHDQ96IW2 RNU6-436P-201ENST00000516171 114 ntBASIC3.31□□□□□ -1.88
SHDQ96IW2 RNU6-191P-201ENST00000516295 94 ntBASIC3.31□□□□□ -1.88
SHDQ96IW2 RNU6-966P-201ENST00000516479 104 ntBASIC3.31□□□□□ -1.88
SHDQ96IW2 Y_RNA.777-201ENST00000516982 102 ntBASIC3.31□□□□□ -1.88
SHDQ96IW2 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.31□□□□□ -1.88
SHDQ96IW2 MIR4643-201ENST00000577473 78 ntBASIC3.31□□□□□ -1.88
SHDQ96IW2 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SHDQ96IW2 Y_RNA.771-201ENST00000598668 102 ntBASIC3.31□□□□□ -1.88
SHDQ96IW2 AL355297.2-201ENST00000604792 129 ntBASIC3.31□□□□□ -1.88
SHDQ96IW2 AL033523.1-201ENST00000605153 153 ntBASIC3.31□□□□□ -1.88
SHDQ96IW2 Y_RNA.789-201ENST00000622480 102 ntBASIC3.31□□□□□ -1.88
SHDQ96IW2 AC009487.4-201ENST00000624969 3585 ntBASIC3.31□□□□□ -1.88
SHDQ96IW2 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SHDQ96IW2 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHDQ96IW2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.3□□□□□ -1.88
SHDQ96IW2 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.3□□□□□ -1.88
SHDQ96IW2 Y_RNA.29-201ENST00000362570 113 ntBASIC3.3□□□□□ -1.88
SHDQ96IW2 Y_RNA.199-201ENST00000364014 102 ntBASIC3.3□□□□□ -1.88
SHDQ96IW2 Y_RNA.243-201ENST00000364481 109 ntBASIC3.3□□□□□ -1.88
SHDQ96IW2 SNORA71.1-201ENST00000364523 117 ntBASIC3.3□□□□□ -1.88
SHDQ96IW2 RNA5SP126-201ENST00000365092 109 ntBASIC3.3□□□□□ -1.88
SHDQ96IW2 SNORA7.4-201ENST00000384249 137 ntBASIC3.3□□□□□ -1.88
SHDQ96IW2 RNU6-1289P-201ENST00000384431 106 ntBASIC3.3□□□□□ -1.88
SHDQ96IW2 RNU2-14P-201ENST00000411053 191 ntBASIC3.3□□□□□ -1.88
SHDQ96IW2 AC002075.2-201ENST00000425207 252 ntBASIC3.3□□□□□ -1.88
SHDQ96IW2 AC022018.1-201ENST00000430685 241 ntBASIC3.3□□□□□ -1.88
SHDQ96IW2 COX6CP14-201ENST00000469580 174 ntBASIC3.3□□□□□ -1.88
SHDQ96IW2 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC3.3□□□□□ -1.88
SHDQ96IW2 AC008885.1-201ENST00000514930 301 ntBASIC3.3□□□□□ -1.88
SHDQ96IW2 RNU6-965P-201ENST00000516721 96 ntBASIC3.3□□□□□ -1.88
SHDQ96IW2 MIR3145-201ENST00000580727 82 ntBASIC3.3□□□□□ -1.88
SHDQ96IW2 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC3.3□□□□□ -1.88
SHDQ96IW2 MIR622-201ENST00000638396 96 ntBASIC3.3□□□□□ -1.88
SHDQ96IW2 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.3□□□□□ -1.88
SHDQ96IW2 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SHDQ96IW2 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SHDQ96IW2 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SHDQ96IW2 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.29□□□□□ -1.88
SHDQ96IW2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
SHDQ96IW2 Y_RNA.122-201ENST00000363331 96 ntBASIC3.29□□□□□ -1.88
SHDQ96IW2 Y_RNA.297-201ENST00000364950 91 ntBASIC3.29□□□□□ -1.88
SHDQ96IW2 MIR561-201ENST00000385216 97 ntBASIC3.29□□□□□ -1.88
SHDQ96IW2 AL031003.1-201ENST00000404229 172 ntBASIC3.29□□□□□ -1.88
SHDQ96IW2 AL139156.1-201ENST00000412785 841 ntBASIC3.29□□□□□ -1.88
SHDQ96IW2 RNU6-948P-201ENST00000516374 107 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 146 ms